RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 BCL2L15Q5TBC7 163 aa13.36□□□□□ -0.27
HDHD3-201ENST00000238379 RPUSD3Q6P087 351 aaKnown RBP13.36□□□□□ -0.27
HDHD3-201ENST00000238379 SLC22A24Q8N4F4 322 aa13.36□□□□□ -0.27
HDHD3-201ENST00000238379 ACOT12Q8WYK0 555 aa13.36□□□□□ -0.27
HDHD3-201ENST00000238379 THRSPQ92748 146 aa13.36□□□□□ -0.27
HDHD3-201ENST00000238379 APH1AQ96BI3 265 aa13.36□□□□□ -0.27
HDHD3-201ENST00000238379 KCTD12Q96CX2 325 aaKnown RBP13.36□□□□□ -0.27
HDHD3-201ENST00000238379 ABHD17AQ96GS6 310 aa13.36□□□□□ -0.27
HDHD3-201ENST00000238379 CEP19Q96LK0 163 aa13.36□□□□□ -0.27
HDHD3-201ENST00000238379 GFI1Q99684 422 aa13.36□□□□□ -0.27
HDHD3-201ENST00000238379 PBOV1Q9GZY1 135 aa13.36□□□□□ -0.27
HDHD3-201ENST00000238379 SLC25A18Q9H1K4 315 aa13.36□□□□□ -0.27
HDHD3-201ENST00000238379 CLCF1Q9UBD9 225 aa13.36□□□□□ -0.27
HDHD3-201ENST00000238379 COMMD3Q9UBI1 195 aa13.36□□□□□ -0.27
HDHD3-201ENST00000238379 SLC5A6Q9Y289 635 aa13.36□□□□□ -0.27
HDHD3-201ENST00000238379 AK6Q9Y3D8 172 aaKnown RBP13.36□□□□□ -0.27
HDHD3-201ENST00000238379 FREM1Q5H8C1 2179 aa13.36□□□□□ -0.27
HDHD3-201ENST00000238379 ANKRD61A6NGH8 418 aa13.36□□□□□ -0.27
HDHD3-201ENST00000238379 NOTOA8MTQ0 251 aa13.36□□□□□ -0.27
HDHD3-201ENST00000238379 DOK2O60496 412 aa13.36□□□□□ -0.27
HDHD3-201ENST00000238379 EPXP11678 715 aa13.36□□□□□ -0.27
HDHD3-201ENST00000238379 FCGR2AP12318 317 aa13.36□□□□□ -0.27
HDHD3-201ENST00000238379 ACHEP22303 614 aa13.36□□□□□ -0.27
HDHD3-201ENST00000238379 GRB2P62993 217 aaKnown RBP13.36□□□□□ -0.27
HDHD3-201ENST00000238379 STK11Q15831 433 aa13.36□□□□□ -0.27
HDHD3-201ENST00000238379 TBR1Q16650 682 aa13.36□□□□□ -0.27
HDHD3-201ENST00000238379 RSPO1Q2MKA7 263 aaPredicted RBP13.36□□□□□ -0.27
HDHD3-201ENST00000238379 NRN1LQ496H8 165 aa13.36□□□□□ -0.27
HDHD3-201ENST00000238379 ELFN2Q5R3F8 820 aa13.36□□□□□ -0.27
HDHD3-201ENST00000238379 C16orf87Q6PH81 154 aa13.36□□□□□ -0.27
HDHD3-201ENST00000238379 TSEN15Q8WW01 171 aaKnown RBP13.36□□□□□ -0.27
HDHD3-201ENST00000238379 ASB5Q8WWX0 329 aa13.36□□□□□ -0.27
HDHD3-201ENST00000238379 SARAFQ96BY9 339 aa13.36□□□□□ -0.27
HDHD3-201ENST00000238379 KCNJ15Q99712 375 aa13.36□□□□□ -0.27
HDHD3-201ENST00000238379 NUFIP1Q9UHK0 495 aaKnown RBP13.36□□□□□ -0.27
HDHD3-201ENST00000238379 DAPK2Q9UIK4 370 aa13.36□□□□□ -0.27
HDHD3-201ENST00000238379 HHLA2Q9UM44 414 aa13.36□□□□□ -0.27
HDHD3-201ENST00000238379 TRAV8-7A0A075B6U6 113 aa13.35□□□□□ -0.27
HDHD3-201ENST00000238379 LOC107986453A0A1B0GWG9 222 aa13.35□□□□□ -0.27
HDHD3-201ENST00000238379 ACSM4P0C7M7 580 aa13.35□□□□□ -0.27
HDHD3-201ENST00000238379 UBCP0CG48 685 aaKnown RBP13.35□□□□□ -0.27
HDHD3-201ENST00000238379 SLC2A2P11168 524 aaPredicted RBP13.35□□□□□ -0.27
HDHD3-201ENST00000238379 AGTR1P30556 359 aa13.35□□□□□ -0.27
HDHD3-201ENST00000238379 OTX1P32242 354 aaPredicted RBP13.35□□□□□ -0.27
HDHD3-201ENST00000238379 TMEM244Q5VVB8 128 aa13.35□□□□□ -0.27
HDHD3-201ENST00000238379 ASPHD2Q6ICH7 369 aa13.35□□□□□ -0.27
HDHD3-201ENST00000238379 MZT2AQ6P582 158 aa13.35□□□□□ -0.27
HDHD3-201ENST00000238379 STAC2Q6ZMT1 411 aa13.35□□□□□ -0.27
HDHD3-201ENST00000238379 MOB1AQ9H8S9 216 aa13.35□□□□□ -0.27
HDHD3-201ENST00000238379 TCF7L1Q9HCS4 588 aa13.35□□□□□ -0.27
HDHD3-201ENST00000238379 V9GYH0 126 aa13.35□□□□□ -0.27
HDHD3-201ENST00000238379 P2RY10O00398 339 aa13.34□□□□□ -0.27
HDHD3-201ENST00000238379 PDCD5O14737 125 aa13.34□□□□□ -0.27
HDHD3-201ENST00000238379 HPGDSO60760 199 aa13.34□□□□□ -0.27
HDHD3-201ENST00000238379 ADRA2CP18825 462 aa13.34□□□□□ -0.27
HDHD3-201ENST00000238379 APEX1P27695 318 aaKnown RBP13.34□□□□□ -0.27
HDHD3-201ENST00000238379 CX3CR1P49238 355 aa13.34□□□□□ -0.27
HDHD3-201ENST00000238379 ZNF121P58317 390 aaPredicted RBP13.34□□□□□ -0.27
HDHD3-201ENST00000238379 PPP3R1P63098 170 aa13.34□□□□□ -0.27
HDHD3-201ENST00000238379 ARF1P84077 181 aaKnown RBP13.34□□□□□ -0.27
HDHD3-201ENST00000238379 GALK2Q01415 458 aa13.34□□□□□ -0.27
HDHD3-201ENST00000238379 ZNF813Q6ZN06 617 aa13.34□□□□□ -0.27
HDHD3-201ENST00000238379 ZNF627Q7L945 461 aa13.34□□□□□ -0.27
HDHD3-201ENST00000238379 PRSS45Q7RTY3 260 aa13.34□□□□□ -0.27
HDHD3-201ENST00000238379 LRRTM1Q86UE6 522 aa13.34□□□□□ -0.27
HDHD3-201ENST00000238379 SKA3Q8IX90 412 aa13.34□□□□□ -0.27
HDHD3-201ENST00000238379 ZNF100Q8IYN0 542 aa13.34□□□□□ -0.27
HDHD3-201ENST00000238379 GMPPAQ96IJ6 420 aaPredicted RBP13.34□□□□□ -0.27
HDHD3-201ENST00000238379 SLITRK2Q9H156 845 aa13.34□□□□□ -0.27
HDHD3-201ENST00000238379 PLEK2Q9NYT0 353 aa13.34□□□□□ -0.27
HDHD3-201ENST00000238379 DHDHQ9UQ10 334 aa13.34□□□□□ -0.27
HDHD3-201ENST00000238379 IGF2RP11717 2491 aa13.34□□□□□ -0.27
HDHD3-201ENST00000238379 PTPRQQ9UMZ3 2332 aa13.34□□□□□ -0.27
HDHD3-201ENST00000238379 ZNF587BE7ETH6 402 aa13.34□□□□□ -0.27
HDHD3-201ENST00000238379 SLC2A1P11166 492 aa13.34□□□□□ -0.27
HDHD3-201ENST00000238379 ZNF32P17041 273 aa13.34□□□□□ -0.27
HDHD3-201ENST00000238379 ATF1P18846 271 aa13.34□□□□□ -0.27
HDHD3-201ENST00000238379 ANOS1P23352 680 aa13.34□□□□□ -0.27
HDHD3-201ENST00000238379 FOXG1P55316 489 aaPredicted RBP13.34□□□□□ -0.27
HDHD3-201ENST00000238379 IFITM3Q01628 133 aa13.34□□□□□ -0.27
HDHD3-201ENST00000238379 SNX29P2Q8IUI4 249 aa13.34□□□□□ -0.27
HDHD3-201ENST00000238379 ZNF283Q8N7M2 679 aa13.34□□□□□ -0.27
HDHD3-201ENST00000238379 OR5M9Q8NGP3 310 aa13.34□□□□□ -0.27
HDHD3-201ENST00000238379 FGFBP3Q8TAT2 258 aa13.34□□□□□ -0.27
HDHD3-201ENST00000238379 EXTL1Q92935 676 aa13.34□□□□□ -0.27
HDHD3-201ENST00000238379 TRIB1Q96RU8 372 aa13.34□□□□□ -0.27
HDHD3-201ENST00000238379 GLRX2Q9NS18 164 aa13.34□□□□□ -0.27
HDHD3-201ENST00000238379 ZNF319Q9P2F9 582 aa13.34□□□□□ -0.27
HDHD3-201ENST00000238379 TP53TG5Q9Y2B4 290 aa13.34□□□□□ -0.27
HDHD3-201ENST00000238379 LAMA5O15230 3695 aa13.33□□□□□ -0.28
HDHD3-201ENST00000238379 A0A1B0GTI1 187 aa13.33□□□□□ -0.28
HDHD3-201ENST00000238379 OR14I1A6ND48 311 aa13.33□□□□□ -0.28
HDHD3-201ENST00000238379 SGCEO43556 437 aa13.33□□□□□ -0.28
HDHD3-201ENST00000238379 SS18L1O75177 396 aaPredicted RBP13.33□□□□□ -0.28
HDHD3-201ENST00000238379 PAHP00439 452 aa13.33□□□□□ -0.28
HDHD3-201ENST00000238379 CD2P06729 351 aa13.33□□□□□ -0.28
HDHD3-201ENST00000238379 PATE4P0C8F1 98 aa13.33□□□□□ -0.28
HDHD3-201ENST00000238379 SCRN3Q0VDG4 424 aa13.33□□□□□ -0.28
HDHD3-201ENST00000238379 RAB35Q15286 201 aa13.33□□□□□ -0.28
HDHD3-201ENST00000238379 SLC16A14Q7RTX9 510 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms