RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 PSMB1P20618 241 aaKnown RBP16.7■□□□□ 0.26
CLIP2-201ENST00000223398 CLINT1Q14677 625 aa16.7■□□□□ 0.26
CLIP2-201ENST00000223398 BRICD5Q6PL45 260 aa16.7■□□□□ 0.26
CLIP2-201ENST00000223398 DND1Q8IYX4 353 aaKnown RBP16.7■□□□□ 0.26
CLIP2-201ENST00000223398 NANOGP1Q8N7R0 232 aa16.7■□□□□ 0.26
CLIP2-201ENST00000223398 ZIC2O95409 532 aaPredicted RBP16.7■□□□□ 0.26
CLIP2-201ENST00000223398 CCR6P51684 374 aa16.7■□□□□ 0.26
CLIP2-201ENST00000223398 B3GNTL1Q67FW5 361 aaPredicted RBP16.7■□□□□ 0.26
CLIP2-201ENST00000223398 S100A7AQ86SG5 101 aa16.7■□□□□ 0.26
CLIP2-201ENST00000223398 DAZAP1Q96EP5 407 aaKnown RBP16.7■□□□□ 0.26
CLIP2-201ENST00000223398 HRH4Q9H3N8 390 aa16.7■□□□□ 0.26
CLIP2-201ENST00000223398 GDF2Q9UK05 429 aaPredicted RBP16.7■□□□□ 0.26
CLIP2-201ENST00000223398 ETV7Q9Y603 341 aa16.7■□□□□ 0.26
CLIP2-201ENST00000223398 ADAMTSL1Q8N6G6 1762 aa16.7■□□□□ 0.26
CLIP2-201ENST00000223398 A0A0B4J2A0 478 aa16.7■□□□□ 0.26
CLIP2-201ENST00000223398 UBL3O95164 117 aa16.7■□□□□ 0.26
CLIP2-201ENST00000223398 CLEC3BP05452 202 aa16.7■□□□□ 0.26
CLIP2-201ENST00000223398 CSF3P09919 207 aa16.7■□□□□ 0.26
CLIP2-201ENST00000223398 HTD2P86397 168 aa16.7■□□□□ 0.26
CLIP2-201ENST00000223398 ZNF117Q03924 483 aa16.7■□□□□ 0.26
CLIP2-201ENST00000223398 CLVS2Q5SYC1 327 aa16.7■□□□□ 0.26
CLIP2-201ENST00000223398 SPINK14Q6IE38 97 aa16.7■□□□□ 0.26
CLIP2-201ENST00000223398 CXorf67Q86X51 503 aaPredicted RBP16.7■□□□□ 0.26
CLIP2-201ENST00000223398 HPSE2Q8WWQ2 592 aa16.7■□□□□ 0.26
CLIP2-201ENST00000223398 OR2A5Q96R48 311 aa16.7■□□□□ 0.26
CLIP2-201ENST00000223398 PBOV1Q9GZY1 135 aa16.7■□□□□ 0.26
CLIP2-201ENST00000223398 SHPKQ9UHJ6 478 aa16.7■□□□□ 0.26
CLIP2-201ENST00000223398 PPP1R3CQ9UQK1 317 aa16.7■□□□□ 0.26
CLIP2-201ENST00000223398 ATG2BQ96BY7 2078 aa16.69■□□□□ 0.26
CLIP2-201ENST00000223398 IGLV3-16A0A075B6K0 115 aa16.69■□□□□ 0.26
CLIP2-201ENST00000223398 A0A087WUJ7 227 aa16.69■□□□□ 0.26
CLIP2-201ENST00000223398 MDFIC2A0A1B0GVS7 189 aa16.69■□□□□ 0.26
CLIP2-201ENST00000223398 ATP1B1P05026 303 aa16.69■□□□□ 0.26
CLIP2-201ENST00000223398 C19orf43Q9BQ61 176 aa16.69■□□□□ 0.26
CLIP2-201ENST00000223398 GABARAPH6UMI1 98 aa16.69■□□□□ 0.26
CLIP2-201ENST00000223398 YIF1AO95070 293 aa16.69■□□□□ 0.26
CLIP2-201ENST00000223398 GABARAPO95166 117 aa16.69■□□□□ 0.26
CLIP2-201ENST00000223398 USF2Q15853 346 aaPredicted RBP16.69■□□□□ 0.26
CLIP2-201ENST00000223398 ZCCHC4Q9H5U6 513 aa16.69■□□□□ 0.26
CLIP2-201ENST00000223398 MRPS34P82930 218 aaKnown RBP16.69■□□□□ 0.26
CLIP2-201ENST00000223398 OR2A2Q6IF42 318 aa16.69■□□□□ 0.26
CLIP2-201ENST00000223398 TMPRSS7Q7RTY8 843 aa16.69■□□□□ 0.26
CLIP2-201ENST00000223398 OR4C3Q8NH37 302 aa16.69■□□□□ 0.26
CLIP2-201ENST00000223398 SSUH2Q9Y2M2 353 aa16.69■□□□□ 0.26
CLIP2-201ENST00000223398 RREB1Q92766 1687 aa16.69■□□□□ 0.26
CLIP2-201ENST00000223398 TEX51A0A1B0GUA7 166 aa16.69■□□□□ 0.26
CLIP2-201ENST00000223398 ZNF628Q5EBL2 1059 aa16.69■□□□□ 0.26
CLIP2-201ENST00000223398 NRARPQ7Z6K4 114 aa16.69■□□□□ 0.26
CLIP2-201ENST00000223398 KIAA1958Q8N8K9 716 aa16.69■□□□□ 0.26
CLIP2-201ENST00000223398 FOXB1Q99853 325 aa16.69■□□□□ 0.26
CLIP2-201ENST00000223398 PLCXD1Q9NUJ7 323 aa16.69■□□□□ 0.26
CLIP2-201ENST00000223398 XRCC2O43543 280 aa16.68■□□□□ 0.26
CLIP2-201ENST00000223398 NOXA1Q86UR1 476 aa16.68■□□□□ 0.26
CLIP2-201ENST00000223398 SIGLEC11Q96RL6 698 aa16.68■□□□□ 0.26
CLIP2-201ENST00000223398 MBOAT4Q96T53 435 aa16.68■□□□□ 0.26
CLIP2-201ENST00000223398 RNF167Q9H6Y7 350 aa16.68■□□□□ 0.26
CLIP2-201ENST00000223398 SLC23A1Q9UHI7 598 aa16.68■□□□□ 0.26
CLIP2-201ENST00000223398 MCM3APO60318 1980 aa16.68■□□□□ 0.26
CLIP2-201ENST00000223398 GSK3AP49840 483 aa16.68■□□□□ 0.26
CLIP2-201ENST00000223398 RAB11AP62491 216 aa16.68■□□□□ 0.26
CLIP2-201ENST00000223398 CLDN22Q8N7P3 220 aa16.68■□□□□ 0.26
CLIP2-201ENST00000223398 KCNJ16Q9NPI9 418 aa16.68■□□□□ 0.26
CLIP2-201ENST00000223398 ZNF573Q86YE8 665 aa16.68■□□□□ 0.26
CLIP2-201ENST00000223398 ZDHHC23Q8IYP9 409 aa16.68■□□□□ 0.26
CLIP2-201ENST00000223398 HAS2Q92819 552 aa16.68■□□□□ 0.26
CLIP2-201ENST00000223398 MALSU1Q96EH3 234 aa16.68■□□□□ 0.26
CLIP2-201ENST00000223398 RIMS4Q9H426 269 aaPredicted RBP16.68■□□□□ 0.26
CLIP2-201ENST00000223398 GLTPQ9NZD2 209 aa16.68■□□□□ 0.26
CLIP2-201ENST00000223398 SUMO3P55854 103 aaPredicted RBP16.68■□□□□ 0.26
CLIP2-201ENST00000223398 RAB1AP62820 205 aa16.68■□□□□ 0.26
CLIP2-201ENST00000223398 NKG7Q16617 165 aa16.68■□□□□ 0.26
CLIP2-201ENST00000223398 ELFN2Q5R3F8 820 aa16.68■□□□□ 0.26
CLIP2-201ENST00000223398 OR56B4Q8NH76 319 aa16.68■□□□□ 0.26
CLIP2-201ENST00000223398 CFHR5Q9BXR6 569 aa16.68■□□□□ 0.26
CLIP2-201ENST00000223398 SRP9P49458 86 aaKnown RBP16.67■□□□□ 0.26
CLIP2-201ENST00000223398 MNX1P50219 401 aaPredicted RBP16.67■□□□□ 0.26
CLIP2-201ENST00000223398 ZNF121P58317 390 aaPredicted RBP16.67■□□□□ 0.26
CLIP2-201ENST00000223398 EBPQ15125 230 aaKnown RBP16.67■□□□□ 0.26
CLIP2-201ENST00000223398 OPRM1P35372 400 aa16.67■□□□□ 0.26
CLIP2-201ENST00000223398 HOXD12P35452 270 aa16.67■□□□□ 0.26
CLIP2-201ENST00000223398 TAF9Q16594 264 aa16.67■□□□□ 0.26
CLIP2-201ENST00000223398 SLC25A26Q70HW3 274 aa16.67■□□□□ 0.26
CLIP2-201ENST00000223398 ZDHHC16Q969W1 377 aa16.67■□□□□ 0.26
CLIP2-201ENST00000223398 WDR1O75083 606 aa16.67■□□□□ 0.26
CLIP2-201ENST00000223398 KIR2DL1P43626 348 aaPredicted RBP16.67■□□□□ 0.26
CLIP2-201ENST00000223398 RAE1P78406 368 aaKnown RBP16.67■□□□□ 0.26
CLIP2-201ENST00000223398 FZD5Q13467 585 aa16.67■□□□□ 0.26
CLIP2-201ENST00000223398 PCK2Q16822 640 aa16.67■□□□□ 0.26
CLIP2-201ENST00000223398 CCDC28AQ8IWP9 274 aa16.67■□□□□ 0.26
CLIP2-201ENST00000223398 NOXO1Q8NFA2 376 aa16.67■□□□□ 0.26
CLIP2-201ENST00000223398 PRR7Q8TB68 274 aa16.67■□□□□ 0.26
CLIP2-201ENST00000223398 SLCO1C1Q9NYB5 712 aa16.67■□□□□ 0.26
CLIP2-201ENST00000223398 KNTC1P50748 2209 aa16.67■□□□□ 0.26
CLIP2-201ENST00000223398 POM121CA8CG34 1229 aa16.67■□□□□ 0.26
CLIP2-201ENST00000223398 GLAP06280 429 aa16.67■□□□□ 0.26
CLIP2-201ENST00000223398 TAS2R30P59541 319 aa16.67■□□□□ 0.26
CLIP2-201ENST00000223398 OR8G2PQ6IF36 304 aa16.67■□□□□ 0.26
CLIP2-201ENST00000223398 LHFPL2Q6ZUX7 228 aa16.67■□□□□ 0.26
CLIP2-201ENST00000223398 NLRC3Q7RTR2 1065 aa16.67■□□□□ 0.26
CLIP2-201ENST00000223398 FJX1Q86VR8 437 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms