RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 COX5BP10606 129 aa12.96□□□□□ -0.33
RPA3-201ENST00000223129 WNT5AP41221 380 aa12.96□□□□□ -0.33
RPA3-201ENST00000223129 ZNF454Q8N9F8 522 aa12.96□□□□□ -0.33
RPA3-201ENST00000223129 OR1J2Q8NGS2 313 aa12.96□□□□□ -0.33
RPA3-201ENST00000223129 FBLIM1Q8WUP2 373 aa12.96□□□□□ -0.33
RPA3-201ENST00000223129 AKAP1Q92667 903 aaKnown RBP eCLIP12.96□□□□□ -0.33
RPA3-201ENST00000223129 LGALS12Q96DT0 336 aa12.96□□□□□ -0.33
RPA3-201ENST00000223129 COQ7Q99807 217 aa12.96□□□□□ -0.33
RPA3-201ENST00000223129 GRIP1Q9Y3R0 1128 aa12.96□□□□□ -0.33
RPA3-201ENST00000223129 LRBAP50851 2863 aa12.96□□□□□ -0.33
RPA3-201ENST00000223129 PRR32B1ATL7 298 aa12.96□□□□□ -0.34
RPA3-201ENST00000223129 E7EQL1 145 aa12.96□□□□□ -0.34
RPA3-201ENST00000223129 F5H5K5 113 aa12.96□□□□□ -0.34
RPA3-201ENST00000223129 MAGEB4O15481 346 aaPredicted RBP12.96□□□□□ -0.34
RPA3-201ENST00000223129 MYF6P23409 242 aa12.96□□□□□ -0.34
RPA3-201ENST00000223129 SSTR2P30874 369 aa12.96□□□□□ -0.34
RPA3-201ENST00000223129 CXCR4P61073 352 aa12.96□□□□□ -0.34
RPA3-201ENST00000223129 POU4F2Q12837 409 aa12.96□□□□□ -0.34
RPA3-201ENST00000223129 VHLLQ6RSH7 139 aa12.96□□□□□ -0.34
RPA3-201ENST00000223129 NAA40Q86UY6 237 aa12.96□□□□□ -0.34
RPA3-201ENST00000223129 ZNF101Q8IZC7 436 aa12.96□□□□□ -0.34
RPA3-201ENST00000223129 OR10H4Q8NGA5 316 aa12.96□□□□□ -0.34
RPA3-201ENST00000223129 ZFAND2BQ8WV99 257 aa12.96□□□□□ -0.34
RPA3-201ENST00000223129 CNBD2Q96M20 576 aa12.96□□□□□ -0.34
RPA3-201ENST00000223129 RHNO1Q9BSD3 238 aa12.96□□□□□ -0.34
RPA3-201ENST00000223129 ANKRD60Q9BZ19 345 aa12.96□□□□□ -0.34
RPA3-201ENST00000223129 RAB26Q9ULW5 256 aa12.96□□□□□ -0.34
RPA3-201ENST00000223129 PCDHGB5Q9Y5G0 923 aa12.96□□□□□ -0.34
RPA3-201ENST00000223129 NGFP01138 241 aa12.95□□□□□ -0.34
RPA3-201ENST00000223129 TAF13Q15543 124 aa12.95□□□□□ -0.34
RPA3-201ENST00000223129 ZNF672Q499Z4 452 aaPredicted RBP12.95□□□□□ -0.34
RPA3-201ENST00000223129 LRRN1Q6UXK5 716 aa12.95□□□□□ -0.34
RPA3-201ENST00000223129 SSX6Q7RTT6 188 aa12.95□□□□□ -0.34
RPA3-201ENST00000223129 RNF133Q8WVZ7 376 aa12.95□□□□□ -0.34
RPA3-201ENST00000223129 C4orf45Q96LM5 186 aa12.95□□□□□ -0.34
RPA3-201ENST00000223129 COPS4Q9BT78 406 aa12.95□□□□□ -0.34
RPA3-201ENST00000223129 DDX28Q9NUL7 540 aaKnown RBP12.95□□□□□ -0.34
RPA3-201ENST00000223129 CISD1Q9NZ45 108 aaKnown RBP12.95□□□□□ -0.34
RPA3-201ENST00000223129 EXOGQ9Y2C4 368 aaKnown RBP12.95□□□□□ -0.34
RPA3-201ENST00000223129 MYRFQ9Y2G1 1151 aa12.95□□□□□ -0.34
RPA3-201ENST00000223129 RPL36Q9Y3U8 105 aaKnown RBP12.95□□□□□ -0.34
RPA3-201ENST00000223129 A0A1W2PQL4 384 aaPredicted RBP12.95□□□□□ -0.34
RPA3-201ENST00000223129 ZNF878C9JN71 531 aa12.95□□□□□ -0.34
RPA3-201ENST00000223129 XPNPEP2O43895 674 aa12.95□□□□□ -0.34
RPA3-201ENST00000223129 GPRIN2O60269 458 aa12.95□□□□□ -0.34
RPA3-201ENST00000223129 NR4A1P22736 598 aa12.95□□□□□ -0.34
RPA3-201ENST00000223129 PRKXP51817 358 aa12.95□□□□□ -0.34
RPA3-201ENST00000223129 UCP2P55851 309 aa12.95□□□□□ -0.34
RPA3-201ENST00000223129 SNTB2Q13425 540 aaKnown RBP12.95□□□□□ -0.34
RPA3-201ENST00000223129 NRGNQ92686 78 aa12.95□□□□□ -0.34
RPA3-201ENST00000223129 PLEKHF2Q9H8W4 249 aa12.95□□□□□ -0.34
RPA3-201ENST00000223129 UBTD1Q9HAC8 227 aa12.95□□□□□ -0.34
RPA3-201ENST00000223129 SLCO1C1Q9NYB5 712 aa12.95□□□□□ -0.34
RPA3-201ENST00000223129 TMEM14AQ9Y6G1 99 aa12.95□□□□□ -0.34
RPA3-201ENST00000223129 J3QRE1 110 aa12.94□□□□□ -0.34
RPA3-201ENST00000223129 H2BFMP0C1H6 154 aa12.94□□□□□ -0.34
RPA3-201ENST00000223129 OR2T7P0C7T2 308 aa12.94□□□□□ -0.34
RPA3-201ENST00000223129 OPRL1P41146 370 aa12.94□□□□□ -0.34
RPA3-201ENST00000223129 ERVS71-1P61550 626 aa12.94□□□□□ -0.34
RPA3-201ENST00000223129 NKX6-1P78426 367 aaPredicted RBP12.94□□□□□ -0.34
RPA3-201ENST00000223129 ECH1Q13011 328 aa12.94□□□□□ -0.34
RPA3-201ENST00000223129 C11orf91Q3C1V1 193 aa12.94□□□□□ -0.34
RPA3-201ENST00000223129 KRTAP27-1Q3LI81 207 aa12.94□□□□□ -0.34
RPA3-201ENST00000223129 BPIFB6Q8NFQ5 453 aa12.94□□□□□ -0.34
RPA3-201ENST00000223129 OR2T27Q8NH04 317 aa12.94□□□□□ -0.34
RPA3-201ENST00000223129 EIF3KQ9UBQ5 218 aaKnown RBP12.94□□□□□ -0.34
RPA3-201ENST00000223129 ATPIF1Q9UII2 106 aa12.94□□□□□ -0.34
RPA3-201ENST00000223129 CACNA1DQ01668 2161 aa12.93□□□□□ -0.34
RPA3-201ENST00000223129 ZNF670-ZNF695F2Z2N8 137 aa12.93□□□□□ -0.34
RPA3-201ENST00000223129 SMPD2O60906 423 aa12.93□□□□□ -0.34
RPA3-201ENST00000223129 ABHD16AO95870 558 aa12.93□□□□□ -0.34
RPA3-201ENST00000223129 ACSM4P0C7M7 580 aa12.93□□□□□ -0.34
RPA3-201ENST00000223129 ANOS1P23352 680 aa12.93□□□□□ -0.34
RPA3-201ENST00000223129 THBS4P35443 961 aa12.93□□□□□ -0.34
RPA3-201ENST00000223129 ZNF85Q03923 595 aa12.93□□□□□ -0.34
RPA3-201ENST00000223129 ZNF322Q6U7Q0 402 aaPredicted RBP12.93□□□□□ -0.34
RPA3-201ENST00000223129 KRT77Q7Z794 578 aa12.93□□□□□ -0.34
RPA3-201ENST00000223129 OR52I1Q8NGK6 324 aa12.93□□□□□ -0.34
RPA3-201ENST00000223129 ABHD4Q8TB40 342 aa12.93□□□□□ -0.34
RPA3-201ENST00000223129 SPTSSAQ969W0 71 aa12.93□□□□□ -0.34
RPA3-201ENST00000223129 MNTQ99583 582 aa12.93□□□□□ -0.34
RPA3-201ENST00000223129 KCNJ15Q99712 375 aa12.93□□□□□ -0.34
RPA3-201ENST00000223129 LIME1Q9H400 295 aa12.93□□□□□ -0.34
RPA3-201ENST00000223129 CA10Q9NS85 328 aa12.93□□□□□ -0.34
RPA3-201ENST00000223129 MRPS18AQ9NVS2 196 aaKnown RBP12.93□□□□□ -0.34
RPA3-201ENST00000223129 SPEF1Q9Y4P9 236 aa12.93□□□□□ -0.34
RPA3-201ENST00000223129 N6AMT1Q9Y5N5 214 aa12.93□□□□□ -0.34
RPA3-201ENST00000223129 PLCE1Q9P212 2302 aa12.93□□□□□ -0.34
RPA3-201ENST00000223129 CSMD2Q7Z408 3487 aa12.93□□□□□ -0.34
RPA3-201ENST00000223129 M0R135 149 aa12.93□□□□□ -0.34
RPA3-201ENST00000223129 HS3ST1O14792 307 aa12.93□□□□□ -0.34
RPA3-201ENST00000223129 LCKP06239 509 aa12.93□□□□□ -0.34
RPA3-201ENST00000223129 ADRA2AP08913 450 aa12.93□□□□□ -0.34
RPA3-201ENST00000223129 SLC2A1P11166 492 aa12.93□□□□□ -0.34
RPA3-201ENST00000223129 HSD11B1P28845 292 aa12.93□□□□□ -0.34
RPA3-201ENST00000223129 PCSK6P29122 969 aa12.93□□□□□ -0.34
RPA3-201ENST00000223129 SLC15A1P46059 708 aa12.93□□□□□ -0.34
RPA3-201ENST00000223129 RAB40BQ12829 278 aa12.93□□□□□ -0.34
RPA3-201ENST00000223129 MSMPQ1L6U9 139 aa12.93□□□□□ -0.34
RPA3-201ENST00000223129 C6orf141Q5SZD1 244 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms