RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 EIF1AXP47813 144 aaKnown RBP12.64□□□□□ -0.39
RTFDC1-201ENST00000023939 INPP1P49441 399 aa12.64□□□□□ -0.39
RTFDC1-201ENST00000023939 LHX2P50458 406 aa12.64□□□□□ -0.39
RTFDC1-201ENST00000023939 ART1P52961 327 aa12.64□□□□□ -0.39
RTFDC1-201ENST00000023939 RIPPLY2Q5TAB7 128 aa12.64□□□□□ -0.39
RTFDC1-201ENST00000023939 FAM27BQ5VT28 67 aa12.64□□□□□ -0.39
RTFDC1-201ENST00000023939 UBQLNLQ8IYU4 475 aa12.64□□□□□ -0.39
RTFDC1-201ENST00000023939 TMEM251Q8N6I4 163 aa12.64□□□□□ -0.39
RTFDC1-201ENST00000023939 CELF2-AS1Q8N7Q2 184 aa12.64□□□□□ -0.39
RTFDC1-201ENST00000023939 ZFP62Q8NB50 900 aaPredicted RBP12.64□□□□□ -0.39
RTFDC1-201ENST00000023939 GJC3Q8NFK1 279 aa12.64□□□□□ -0.39
RTFDC1-201ENST00000023939 OR13C3Q8NGS6 347 aa12.64□□□□□ -0.39
RTFDC1-201ENST00000023939 C15orf40Q8WUR7 153 aa12.64□□□□□ -0.39
RTFDC1-201ENST00000023939 HAS2Q92819 552 aa12.64□□□□□ -0.39
RTFDC1-201ENST00000023939 HAVCR1Q96D42 359 aa12.64□□□□□ -0.39
RTFDC1-201ENST00000023939 ULBP2Q9BZM5 246 aa12.64□□□□□ -0.39
RTFDC1-201ENST00000023939 ZNF275Q9NSD4 429 aaPredicted RBP12.64□□□□□ -0.39
RTFDC1-201ENST00000023939 A0A1B0GVC2 190 aa12.63□□□□□ -0.39
RTFDC1-201ENST00000023939 LINC00854A0A1B0GVQ3 168 aa12.63□□□□□ -0.39
RTFDC1-201ENST00000023939 A6NIN4 97 aa12.63□□□□□ -0.39
RTFDC1-201ENST00000023939 RER1O15258 196 aa12.63□□□□□ -0.39
RTFDC1-201ENST00000023939 CD46P15529 392 aa12.63□□□□□ -0.39
RTFDC1-201ENST00000023939 ZNF708P17019 499 aa12.63□□□□□ -0.39
RTFDC1-201ENST00000023939 HSD11B1P28845 292 aa12.63□□□□□ -0.39
RTFDC1-201ENST00000023939 KIR2DL3P43628 341 aa12.63□□□□□ -0.39
RTFDC1-201ENST00000023939 CLDN18P56856 261 aa12.63□□□□□ -0.39
RTFDC1-201ENST00000023939 TAF13Q15543 124 aa12.63□□□□□ -0.39
RTFDC1-201ENST00000023939 SGCAQ16586 387 aa12.63□□□□□ -0.39
RTFDC1-201ENST00000023939 GLT8D1Q68CQ7 371 aa12.63□□□□□ -0.39
RTFDC1-201ENST00000023939 TMPRSS7Q7RTY8 843 aa12.63□□□□□ -0.39
RTFDC1-201ENST00000023939 DNAAF1Q8NEP3 725 aa12.63□□□□□ -0.39
RTFDC1-201ENST00000023939 CPT1CQ8TCG5 803 aa12.63□□□□□ -0.39
RTFDC1-201ENST00000023939 YIPF5Q969M3 257 aa12.63□□□□□ -0.39
RTFDC1-201ENST00000023939 S100A16Q96FQ6 103 aaKnown RBP12.63□□□□□ -0.39
RTFDC1-201ENST00000023939 SCMH1Q96GD3 660 aa12.63□□□□□ -0.39
RTFDC1-201ENST00000023939 HDHD2Q9H0R4 259 aa12.63□□□□□ -0.39
RTFDC1-201ENST00000023939 PLEKHA1Q9HB21 404 aa12.63□□□□□ -0.39
RTFDC1-201ENST00000023939 ACKR4Q9NPB9 350 aa12.63□□□□□ -0.39
RTFDC1-201ENST00000023939 SLC17A5Q9NRA2 495 aa12.63□□□□□ -0.39
RTFDC1-201ENST00000023939 PAQR5Q9NXK6 330 aaPredicted RBP12.63□□□□□ -0.39
RTFDC1-201ENST00000023939 CDV3Q9UKY7 258 aaKnown RBP12.63□□□□□ -0.39
RTFDC1-201ENST00000023939 CACNA1CQ13936 2221 aa12.63□□□□□ -0.39
RTFDC1-201ENST00000023939 LOC390937A0A1W2PQ73 354 aa12.62□□□□□ -0.39
RTFDC1-201ENST00000023939 ARGFXA6NJG6 315 aa12.62□□□□□ -0.39
RTFDC1-201ENST00000023939 P2RY10O00398 339 aa12.62□□□□□ -0.39
RTFDC1-201ENST00000023939 EEF1E1O43324 174 aaKnown RBP12.62□□□□□ -0.39
RTFDC1-201ENST00000023939 ADRB1P08588 477 aa12.62□□□□□ -0.39
RTFDC1-201ENST00000023939 CCL1P22362 96 aa12.62□□□□□ -0.39
RTFDC1-201ENST00000023939 CLDN12P56749 244 aa12.62□□□□□ -0.39
RTFDC1-201ENST00000023939 MRPS10P82664 201 aaKnown RBP12.62□□□□□ -0.39
RTFDC1-201ENST00000023939 RAB11BQ15907 218 aa12.62□□□□□ -0.39
RTFDC1-201ENST00000023939 ATP1A1-AS1Q5TC04 95 aa12.62□□□□□ -0.39
RTFDC1-201ENST00000023939 AAED1Q7RTV5 226 aa12.62□□□□□ -0.39
RTFDC1-201ENST00000023939 LYPD6Q86Y78 171 aa12.62□□□□□ -0.39
RTFDC1-201ENST00000023939 NKAIN3Q8N8D7 197 aa12.62□□□□□ -0.39
RTFDC1-201ENST00000023939 SYNPRQ8TBG9 265 aa12.62□□□□□ -0.39
RTFDC1-201ENST00000023939 ENKURQ8TC29 256 aa12.62□□□□□ -0.39
RTFDC1-201ENST00000023939 SMIM4Q8WVI0 70 aa12.62□□□□□ -0.39
RTFDC1-201ENST00000023939 ROBO4Q8WZ75 1007 aa12.62□□□□□ -0.39
RTFDC1-201ENST00000023939 TAS2R4Q9NYW5 299 aa12.62□□□□□ -0.39
RTFDC1-201ENST00000023939 WDFY4Q6ZS81 3184 aa12.62□□□□□ -0.39
RTFDC1-201ENST00000023939 A0A1B0GTI1 187 aa12.62□□□□□ -0.39
RTFDC1-201ENST00000023939 LANCL1O43813 399 aa12.62□□□□□ -0.39
RTFDC1-201ENST00000023939 CELA3AP09093 270 aa12.62□□□□□ -0.39
RTFDC1-201ENST00000023939 OTX1P32242 354 aaPredicted RBP12.62□□□□□ -0.39
RTFDC1-201ENST00000023939 NTF4P34130 210 aa12.62□□□□□ -0.39
RTFDC1-201ENST00000023939 MAGEA5P43359 124 aa12.62□□□□□ -0.39
RTFDC1-201ENST00000023939 MEOX1P50221 254 aa12.62□□□□□ -0.39
RTFDC1-201ENST00000023939 STK11Q15831 433 aa12.62□□□□□ -0.39
RTFDC1-201ENST00000023939 SLC36A2Q495M3 483 aa12.62□□□□□ -0.39
RTFDC1-201ENST00000023939 C1orf100Q5SVJ3 147 aa12.62□□□□□ -0.39
RTFDC1-201ENST00000023939 AGAP6Q5VW22 663 aa12.62□□□□□ -0.39
RTFDC1-201ENST00000023939 ZNF57Q68EA5 555 aaPredicted RBP12.62□□□□□ -0.39
RTFDC1-201ENST00000023939 ZNF529Q6P280 563 aa12.62□□□□□ -0.39
RTFDC1-201ENST00000023939 PRSS45Q7RTY3 260 aa12.62□□□□□ -0.39
RTFDC1-201ENST00000023939 GALNTL5Q7Z4T8 443 aa12.62□□□□□ -0.39
RTFDC1-201ENST00000023939 GPR137CQ8N3F9 429 aa12.62□□□□□ -0.39
RTFDC1-201ENST00000023939 MEIOBQ8N635 442 aa12.62□□□□□ -0.39
RTFDC1-201ENST00000023939 SLC25A28Q96A46 364 aa12.62□□□□□ -0.39
RTFDC1-201ENST00000023939 FOXRED1Q96CU9 486 aaPredicted RBP12.62□□□□□ -0.39
RTFDC1-201ENST00000023939 C7orf50Q9BRJ6 194 aaKnown RBP12.62□□□□□ -0.39
RTFDC1-201ENST00000023939 LRFN3Q9BTN0 628 aa12.62□□□□□ -0.39
RTFDC1-201ENST00000023939 RBM24Q9BX46 236 aaKnown RBP12.62□□□□□ -0.39
RTFDC1-201ENST00000023939 RNF122Q9H9V4 155 aa12.62□□□□□ -0.39
RTFDC1-201ENST00000023939 FAM86C1Q9NVL1 165 aa12.62□□□□□ -0.39
RTFDC1-201ENST00000023939 CLEC4AQ9UMR7 237 aa12.62□□□□□ -0.39
RTFDC1-201ENST00000023939 LOC100289279A0A1B0GTE1 492 aa12.61□□□□□ -0.39
RTFDC1-201ENST00000023939 A0A1B0GVI7 797 aa12.61□□□□□ -0.39
RTFDC1-201ENST00000023939 H3BSH0 61 aa12.61□□□□□ -0.39
RTFDC1-201ENST00000023939 SYT7O43581 403 aa12.61□□□□□ -0.39
RTFDC1-201ENST00000023939 ACTL6AO96019 429 aa12.61□□□□□ -0.39
RTFDC1-201ENST00000023939 ITGA5P08648 1049 aa12.61□□□□□ -0.39
RTFDC1-201ENST00000023939 DDOSTP39656 456 aa12.61□□□□□ -0.39
RTFDC1-201ENST00000023939 PTH2RP49190 550 aa12.61□□□□□ -0.39
RTFDC1-201ENST00000023939 CAPZA1P52907 286 aa12.61□□□□□ -0.39
RTFDC1-201ENST00000023939 ZNF121P58317 390 aaPredicted RBP12.61□□□□□ -0.39
RTFDC1-201ENST00000023939 PLGLB1Q02325 96 aa12.61□□□□□ -0.39
RTFDC1-201ENST00000023939 DNM1P46Q6ZS02 220 aa12.61□□□□□ -0.39
RTFDC1-201ENST00000023939 SERPINA12Q8IW75 414 aa12.61□□□□□ -0.39
RTFDC1-201ENST00000023939 DTX3Q8N9I9 347 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms