RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Abhd6Q8R2Y0 336 aa9.64□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Sgip1Q8VD37 806 aa9.64□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Tm4sf4Q91XD3 202 aa9.64□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Ak4Q9WUR9 223 aaKnown RBP9.64□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Gm11361A0A1Y7VKY1 152 aa9.64□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Olfr1076A2AK60 313 aa9.64□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Olfr623E9Q382 317 aa9.64□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Gm10260F6YVP7 152 aa9.64□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Rab3dP35276 219 aa9.64□□□□□ -0.87
Scn8a-201ENSMUST00000082209 GdnfP48540 211 aa9.64□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Rps18P62270 152 aaKnown RBP9.64□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Nxt2Q3UNA4 142 aa9.64□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Olfr3Q60879 313 aa9.64□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Hbq1aQ8BYM1 145 aa9.64□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Vmn1r87Q8R255 295 aa9.64□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Ndufb7Q9CR61 137 aa9.64□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Elavl1P70372 326 aaKnown RBP9.64□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Ctf1Q60753 203 aa9.64□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Adgrd1Q80T32 903 aa9.64□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Tubg2Q8VCK3 451 aa9.64□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Arpc3Q9JM76 178 aaKnown RBP9.64□□□□□ -0.87
Scn8a-201ENSMUST00000082209 1700023F06RikA2AB62 382 aa9.64□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Tead1P30051 426 aaKnown RBP9.64□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Q3USZ8 430 aa9.64□□□□□ -0.87
Scn8a-201ENSMUST00000082209 SrmQ64674 302 aa9.64□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Il36bQ9D6Z6 183 aa9.64□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Pmm2Q9Z2M7 242 aa9.64□□□□□ -0.87
Scn8a-201ENSMUST00000082209 H2-D1P14427 368 aa9.64□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Ccr8P56484 353 aa9.64□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Sec61a1P61620 476 aaKnown RBP9.64□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Gm5460Q3UQ97 254 aa9.64□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Amer3Q6NS69 780 aa9.64□□□□□ -0.87
Scn8a-201ENSMUST00000082209 CcnqQ8QZR8 250 aa9.64□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Olfr1384Q8VFA8 318 aa9.64□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Psat1Q99K85 370 aa9.64□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Tas1r1Q99PG6 842 aa9.64□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Pde7bQ9QXQ1 446 aa9.64□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Gm11634A0A1B0GSX1 172 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Olfr1082A0A1L1SUC9 313 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 BlkP16277 499 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Tppp2Q0P5Y3 170 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Olfr668Q8VGW3 318 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Poldip2Q91VA6 368 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 MrgprdQ91ZB8 321 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Dll4Q9JI71 686 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Arid2E9Q7E2 1828 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Zswim8Q3UHH1 1832 aaKnown RBP9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Gm5678A0A1B0GRG8 277 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Cd300cA2A7V7 229 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Zfp169E9Q3R6 731 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 EllO08856 602 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Cpne4Q8BLR2 557 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Dzank1Q8C008 778 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Tmem56Q8CGF5 276 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Tmem41bQ8K1A5 291 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Irf2bplQ8K3X4 775 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Olfr837Q8VFJ4 312 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Olfr272Q8VGA0 319 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 RabifQ91X96 123 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Taf1Q80UV9 1891 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Olfr376E9Q4M1 320 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Wnt7bP28047 349 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 RanP62827 216 aaKnown RBP9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Olfr1031Q7TR87 336 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Coq3Q8BMS4 370 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Asb16Q8VHS5 453 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Tmem19Q91W52 336 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Arrb2Q91YI4 410 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 NgbQ9ER97 151 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Cpne6Q9Z140 557 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Fam43bA2AM80 330 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Olfr608E9Q564 316 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 GzmmO08643 264 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Ube2mP61082 183 aaKnown RBP9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 DraxinQ6PAL1 343 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Cdkn3Q810P3 211 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 A730061H03RikQ8BGD2 154 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 CenpoQ8K015 298 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Olfr1151Q8VFQ8 308 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Kntc1Q8C3Y4 2207 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 H3f3cP02301 136 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Itgb7P26011 806 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Hoxb13P70321 286 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 H3f3aP84244 136 aaKnown RBP9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 UevldQ3U1V6 471 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Gm10696Q3UTC4 357 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 N4bp2l1Q3V2Q8 238 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Agpat4Q8K4X7 378 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Abhd17cQ8VCV1 320 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Nat8Q9JIY7 227 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Plce1Q8K4S1 2282 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Gm17067E9Q6S4 354 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Rps10P63325 165 aaKnown RBP9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Ptpmt1Q66GT5 193 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Q80UB0 333 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Olfr70Q80ZX9 316 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Smim4Q8C1Q6 80 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Kcnd3Q9Z0V1 655 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Igkv17-121A0A0G2JFA8 117 aa9.63□□□□□ -0.87
Scn8a-201ENSMUST00000082209 Tex264E9Q137 309 aa9.63□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 39.2 ms