RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 PnpoQ91XF0 261 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Exosc5Q9CRA8 235 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Emc4Q9CZX9 183 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Tmem9bQ9JJR8 199 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Isg20Q9JL16 300 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Mecp2Q9Z2D6 484 aaKnown RBP7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Fbn2Q61555 2907 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Pramef6A2A8M8 474 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Awat1A2ADU9 328 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Gpr155A2AWR3 868 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Gm42791D3YYB5 209 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Gm6465F7A7Y6 181 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Gm8906L7N2A2 181 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Alx4O35137 399 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Adam10O35598 749 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Rasd1O35626 280 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 BckdkO55028 412 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Pgam2O70250 253 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Gdf1P20863 357 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Actc1P68033 377 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Acta1P68134 377 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Cab39Q06138 341 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Ipcef1Q5DU31 406 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Tas2r120Q7M721 295 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Tmem30bQ8BHG3 353 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Pla2g3Q8BZT7 504 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 MetrnQ8C1Q4 291 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Gm9999Q8C5Y2 53 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Nsun3Q8CCT7 348 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Adhfe1Q8R0N6 465 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Vmn1r42Q8VBS7 329 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Olfr98Q8VFD9 309 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Olfr646Q8VGW2 312 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Nop16Q9CPT5 178 aaKnown RBP7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 EcdQ9CS74 641 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 MeiobQ9D513 470 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Hspb11Q9D6H2 143 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 GhrlQ9EQX0 117 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Yipf7Q9JIM5 254 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Fbxo15Q9QZN0 433 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Orc5Q9WUV0 435 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Zfhx3Q61329 3726 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Phf3B2RQG2 2025 aaKnown RBP7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 A26c2A0A140LHE4 291 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Olfr1084A0A1L1STZ9 313 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Olfr1082A0A1L1SUC9 313 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Pramef25A2ASI9 494 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Zfp944E9PUS4 492 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Olfr543E9PWI5 336 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Olfr585E9PXW4 318 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Adamts3E9Q287 1204 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Prss56F2YMG0 604 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Bnip2O54940 326 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 CyctP00015 105 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 HbegfQ06186 208 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Fam187bQ0VAY3 358 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Olfr1136Q0VBI4 310 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Lrfn1Q2WF71 766 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Jsrp1Q3MI48 332 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Csnk2a1Q60737 391 aaKnown RBP7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 St6gal1Q64685 403 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Ube2j2Q6P073 259 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Olfr201Q7TS38 308 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Lrfn4Q80XU8 636 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Negr1Q80Z24 348 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Mab21l2Q8BPP1 359 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Klhl12Q8BZM0 568 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Spem2Q8C5U4 503 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Cox10Q8CFY5 443 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Olfr866Q8VFI7 312 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Olfr648Q8VG19 316 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Defb6Q91VD6 63 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Nt5dc2Q91X76 390 aaKnown RBP7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Marc2Q922Q1 338 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Tex13bQ99MW5 186 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 4931417E11RikQ9CR05 305 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Cdk20Q9JHU3 346 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Galnt16Q9JJ61 558 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Dnaja4Q9JMC3 397 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Tbl2Q9R099 442 aaKnown RBP7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Trbv2A0A0B4J1G8 114 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 8030474K03RikE9Q4Y8 554 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Rdh16f1E9Q9P8 317 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Zfp988F6VKC7 633 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Zfp989H3BLB0 661 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Gm21411J3KMS0 136 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Itln1O88310 313 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Hprt1P00493 218 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 P01661 131 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 P01662 111 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 P01663 111 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Fgf11P70378 225 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 G6pd2P97324 513 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 CpeQ00493 476 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 SryQ05738 395 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Zfp987Q32P14 633 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Cep44Q5HZK1 386 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Iqcf4Q6P8Y2 204 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Gemin8Q8BHE1 238 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Steap2Q8BWB6 489 aa7.76□□□□□ -1.17
Retrieved 100 of 22,080 RNA–protein pairs in 38.7 ms