RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 GPX8Q8TED1 209 aa13.09□□□□□ -0.31
SCARB2-221ENST00000640341 ADIPOR1Q96A54 375 aa13.09□□□□□ -0.31
SCARB2-221ENST00000640341 S1PR5Q9H228 398 aa13.09□□□□□ -0.31
SCARB2-221ENST00000640341 CTSFQ9UBX1 484 aa13.09□□□□□ -0.31
SCARB2-221ENST00000640341 OR52A1Q9UKL2 312 aa13.09□□□□□ -0.31
SCARB2-221ENST00000640341 KLK13Q9UKR3 277 aa13.09□□□□□ -0.31
SCARB2-221ENST00000640341 C5orf51A6NDU8 294 aa13.09□□□□□ -0.31
SCARB2-221ENST00000640341 SLC6A8P48029 635 aa13.09□□□□□ -0.31
SCARB2-221ENST00000640341 EPHA4P54764 986 aa13.09□□□□□ -0.31
SCARB2-221ENST00000640341 CCINQ13939 588 aa13.09□□□□□ -0.31
SCARB2-221ENST00000640341 SGCBQ16585 318 aa13.09□□□□□ -0.31
SCARB2-221ENST00000640341 HDDC2Q7Z4H3 204 aa13.09□□□□□ -0.31
SCARB2-221ENST00000640341 TRAPPC6BQ86SZ2 158 aa13.09□□□□□ -0.31
SCARB2-221ENST00000640341 ZNF101Q8IZC7 436 aa13.09□□□□□ -0.31
SCARB2-221ENST00000640341 OR52N5Q8NH56 324 aa13.09□□□□□ -0.31
SCARB2-221ENST00000640341 SLC25A28Q96A46 364 aa13.09□□□□□ -0.31
SCARB2-221ENST00000640341 ZBTB8AQ96BR9 441 aa13.09□□□□□ -0.31
SCARB2-221ENST00000640341 PTGES2Q9H7Z7 377 aa13.09□□□□□ -0.31
SCARB2-221ENST00000640341 KANTRA0A1W2PQU2 76 aa13.08□□□□□ -0.32
SCARB2-221ENST00000640341 PCP4L1A6NKN8 68 aa13.08□□□□□ -0.32
SCARB2-221ENST00000640341 GNB3P16520 340 aa13.08□□□□□ -0.32
SCARB2-221ENST00000640341 PAPD4Q6PIY7 484 aaKnown RBP13.08□□□□□ -0.32
SCARB2-221ENST00000640341 COX15Q7KZN9 410 aa13.08□□□□□ -0.32
SCARB2-221ENST00000640341 CDH26Q8IXH8 852 aa13.08□□□□□ -0.32
SCARB2-221ENST00000640341 WDR13Q9H1Z4 485 aa13.08□□□□□ -0.32
SCARB2-221ENST00000640341 TXNIPQ9H3M7 391 aa13.08□□□□□ -0.32
SCARB2-221ENST00000640341 PRR13Q9NZ81 148 aa13.08□□□□□ -0.32
SCARB2-221ENST00000640341 EPHA6Q9UF33 1036 aa13.08□□□□□ -0.32
SCARB2-221ENST00000640341 SDK2Q58EX2 2172 aa13.08□□□□□ -0.32
SCARB2-221ENST00000640341 A0A1W2PPC1 479 aa13.08□□□□□ -0.32
SCARB2-221ENST00000640341 PI3P19957 117 aa13.08□□□□□ -0.32
SCARB2-221ENST00000640341 ATP1B3P54709 279 aa13.08□□□□□ -0.32
SCARB2-221ENST00000640341 ADGRE4PQ86SQ3 457 aa13.08□□□□□ -0.32
SCARB2-221ENST00000640341 FJX1Q86VR8 437 aa13.08□□□□□ -0.32
SCARB2-221ENST00000640341 WDFY1Q8IWB7 410 aa13.08□□□□□ -0.32
SCARB2-221ENST00000640341 TSTD1Q8NFU3 115 aa13.08□□□□□ -0.32
SCARB2-221ENST00000640341 ADAMTS18Q8TE60 1221 aa13.08□□□□□ -0.32
SCARB2-221ENST00000640341 PPP1R1CQ8WVI7 109 aa13.08□□□□□ -0.32
SCARB2-221ENST00000640341 DAZLQ92904 295 aaKnown RBP13.08□□□□□ -0.32
SCARB2-221ENST00000640341 VRK1Q99986 396 aaPredicted RBP13.08□□□□□ -0.32
SCARB2-221ENST00000640341 FOXQ1Q9C009 403 aa13.08□□□□□ -0.32
SCARB2-221ENST00000640341 SELENOIQ9C0D9 397 aa13.08□□□□□ -0.32
SCARB2-221ENST00000640341 WWTR1Q9GZV5 400 aa13.08□□□□□ -0.32
SCARB2-221ENST00000640341 TWSG1Q9GZX9 223 aa13.08□□□□□ -0.32
SCARB2-221ENST00000640341 EXOSC3Q9NQT5 275 aaKnown RBP13.08□□□□□ -0.32
SCARB2-221ENST00000640341 IGLV1-36A0A0B4J1U3 117 aa13.07□□□□□ -0.32
SCARB2-221ENST00000640341 TLCD2A6NGC4 264 aa13.07□□□□□ -0.32
SCARB2-221ENST00000640341 CCDC85CA6NKD9 419 aa13.07□□□□□ -0.32
SCARB2-221ENST00000640341 F5H0A9 414 aaPredicted RBP13.07□□□□□ -0.32
SCARB2-221ENST00000640341 CSRP1P21291 193 aaKnown RBP13.07□□□□□ -0.32
SCARB2-221ENST00000640341 FBLP22087 321 aaKnown RBP13.07□□□□□ -0.32
SCARB2-221ENST00000640341 IL13RA1P78552 427 aa13.07□□□□□ -0.32
SCARB2-221ENST00000640341 ARMC10Q8N2F6 343 aa13.07□□□□□ -0.32
SCARB2-221ENST00000640341 OR52N4Q8NGI2 321 aa13.07□□□□□ -0.32
SCARB2-221ENST00000640341 ASB17Q8WXJ9 295 aa13.07□□□□□ -0.32
SCARB2-221ENST00000640341 WBP1Q96G27 269 aa13.07□□□□□ -0.32
SCARB2-221ENST00000640341 IFT46Q9NQC8 304 aa13.07□□□□□ -0.32
SCARB2-221ENST00000640341 SUSD2Q9UGT4 822 aa13.07□□□□□ -0.32
SCARB2-221ENST00000640341 TRAV14DV4A0A0A6YYC5 116 aa13.07□□□□□ -0.32
SCARB2-221ENST00000640341 HMSDA8MTL9 139 aa13.07□□□□□ -0.32
SCARB2-221ENST00000640341 A8MVM7 634 aa13.07□□□□□ -0.32
SCARB2-221ENST00000640341 FOLR1P15328 257 aa13.07□□□□□ -0.32
SCARB2-221ENST00000640341 CSNK1EP49674 416 aaKnown RBP13.07□□□□□ -0.32
SCARB2-221ENST00000640341 POLR2HP52434 150 aaKnown RBP13.07□□□□□ -0.32
SCARB2-221ENST00000640341 LY6G6FQ5SQ64 297 aa13.07□□□□□ -0.32
SCARB2-221ENST00000640341 GKN2Q86XP6 184 aa13.07□□□□□ -0.32
SCARB2-221ENST00000640341 LIPHQ8WWY8 451 aa13.07□□□□□ -0.32
SCARB2-221ENST00000640341 ST8SIA2Q92186 375 aa13.07□□□□□ -0.32
SCARB2-221ENST00000640341 PELOQ9BRX2 385 aaKnown RBP13.07□□□□□ -0.32
SCARB2-221ENST00000640341 TMPRSS13Q9BYE2 586 aa13.07□□□□□ -0.32
SCARB2-221ENST00000640341 CNTD2Q9H8S5 307 aa13.07□□□□□ -0.32
SCARB2-221ENST00000640341 PRMT8Q9NR22 394 aaPredicted RBP13.07□□□□□ -0.32
SCARB2-221ENST00000640341 PMS2P2O95744 297 aa13.07□□□□□ -0.32
SCARB2-221ENST00000640341 PMP2P02689 132 aa13.07□□□□□ -0.32
SCARB2-221ENST00000640341 IFNA6P05013 189 aa13.07□□□□□ -0.32
SCARB2-221ENST00000640341 DLSTP36957 453 aa13.07□□□□□ -0.32
SCARB2-221ENST00000640341 TLE3Q04726 772 aa13.07□□□□□ -0.32
SCARB2-221ENST00000640341 SLC51BQ86UW2 128 aa13.07□□□□□ -0.32
SCARB2-221ENST00000640341 BVESQ8NE79 360 aa13.07□□□□□ -0.32
SCARB2-221ENST00000640341 OR10H5Q8NGA6 315 aa13.07□□□□□ -0.32
SCARB2-221ENST00000640341 OR1L3Q8NH93 324 aa13.07□□□□□ -0.32
SCARB2-221ENST00000640341 WNT2BQ93097 391 aa13.07□□□□□ -0.32
SCARB2-221ENST00000640341 FBXW5Q969U6 566 aa13.07□□□□□ -0.32
SCARB2-221ENST00000640341 C8orf44Q96CB5 159 aa13.07□□□□□ -0.32
SCARB2-221ENST00000640341 CST11Q9H112 138 aa13.07□□□□□ -0.32
SCARB2-221ENST00000640341 ZNF304Q9HCX3 659 aa13.07□□□□□ -0.32
SCARB2-221ENST00000640341 FREM2Q5SZK8 3169 aa13.06□□□□□ -0.32
SCARB2-221ENST00000640341 PLPP3O14495 311 aa13.06□□□□□ -0.32
SCARB2-221ENST00000640341 B3GALNT1O75752 331 aa13.06□□□□□ -0.32
SCARB2-221ENST00000640341 HRH1P35367 487 aa13.06□□□□□ -0.32
SCARB2-221ENST00000640341 DHODHQ02127 395 aa13.06□□□□□ -0.32
SCARB2-221ENST00000640341 PPP1R1AQ13522 171 aa13.06□□□□□ -0.32
SCARB2-221ENST00000640341 UBXN2BQ14CS0 331 aa13.06□□□□□ -0.32
SCARB2-221ENST00000640341 ELAVL1Q15717 326 aaKnown RBP13.06□□□□□ -0.32
SCARB2-221ENST00000640341 NUP54Q7Z3B4 507 aa13.06□□□□□ -0.32
SCARB2-221ENST00000640341 RNF144BQ7Z419 303 aa13.06□□□□□ -0.32
SCARB2-221ENST00000640341 OR5M9Q8NGP3 310 aa13.06□□□□□ -0.32
SCARB2-221ENST00000640341 NPRL2Q8WTW4 380 aa13.06□□□□□ -0.32
SCARB2-221ENST00000640341 C2CD4DB7Z1M9 353 aa13.06□□□□□ -0.32
SCARB2-221ENST00000640341 D6RAR5 112 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms