RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 STRAPQ9Y3F4 350 aaKnown RBP5.55□□□□□ -1.52
SCN1A-212ENST00000636194 A3GALT2U3KPV4 340 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 ROS1P08922 2347 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 MN1Q10571 1320 aaPredicted RBP5.55□□□□□ -1.52
SCN1A-212ENST00000636194 CEP170BQ9Y4F5 1589 aaPredicted RBP5.55□□□□□ -1.52
SCN1A-212ENST00000636194 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.55□□□□□ -1.52
SCN1A-212ENST00000636194 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.55□□□□□ -1.52
SCN1A-212ENST00000636194 ZNF865P0CJ78 1059 aaPredicted RBP5.55□□□□□ -1.52
SCN1A-212ENST00000636194 ELLP55199 621 aaPredicted RBP5.55□□□□□ -1.52
SCN1A-212ENST00000636194 TRA2BP62995 288 aaKnown RBP5.55□□□□□ -1.52
SCN1A-212ENST00000636194 HFEQ30201 348 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 VMA21Q3ZAQ7 101 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 SAPCD1Q5SSQ6 148 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 ACSM5Q6NUN0 579 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 RETREG3Q86VR2 466 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 NAXDQ8IW45 347 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 MFSD6LQ8IWD5 586 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 OR2L13Q8N349 312 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 KRTCAP2Q8N6L1 136 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 SSC4DQ8WTU2 575 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 SCARB1Q8WTV0 552 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 PURBQ96QR8 312 aaKnown RBP5.55□□□□□ -1.52
SCN1A-212ENST00000636194 STARD5Q9NSY2 213 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 PROCRQ9UNN8 238 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 MOKQ9UQ07 419 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 KCNMB2Q9Y691 235 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 FEZF1A0PJY2 475 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 KDM4EB2RXH2 506 aaPredicted RBP5.54□□□□□ -1.52
SCN1A-212ENST00000636194 NXPH3O95157 252 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 HRASP01112 189 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 SLC35E2BP0CK96 405 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 ARNTP27540 789 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 CXCR4P61073 352 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 FABP9Q0Z7S8 132 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 AMIGO3Q86WK7 504 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 OR4S1Q8NGB4 309 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 LNX1Q8TBB1 728 aaPredicted RBP5.54□□□□□ -1.52
SCN1A-212ENST00000636194 SPACA9Q96E40 222 aaPredicted RBP5.54□□□□□ -1.52
SCN1A-212ENST00000636194 NEURL2Q9BR09 285 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 RCC2Q9P258 522 aaKnown RBP5.54□□□□□ -1.52
SCN1A-212ENST00000636194 CBLCQ9ULV8 474 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 SLC45A1Q9Y2W3 748 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 ZC3H12DA2A288 527 aaKnown RBP5.54□□□□□ -1.52
SCN1A-212ENST00000636194 MYBPHLA2RUH7 354 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 ZNF195O14628 629 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 NUPL2O15504 423 aaKnown RBP5.54□□□□□ -1.52
SCN1A-212ENST00000636194 TTRP02766 147 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 PRSS8Q16651 343 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 TMEM176BQ3YBM2 270 aaPredicted RBP5.54□□□□□ -1.52
SCN1A-212ENST00000636194 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.54□□□□□ -1.52
SCN1A-212ENST00000636194 AGBL4Q5VU57 503 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 HMGN2P46Q86SG4 172 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 KMT5CQ86Y97 462 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 SLC26A10Q8NG04 563 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 DIRC2Q96SL1 478 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 ADOQ96SZ5 270 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 MAP1LC3CQ9BXW4 147 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 SSSCA1O60232 199 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 EIF4E2O60573 245 aaKnown RBP5.54□□□□□ -1.52
SCN1A-212ENST00000636194 SCRG1O75711 98 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 CDS2O95674 445 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 IL4P05112 153 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 CST2P09228 141 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 FUT1P19526 365 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 OR1D4P47884 311 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 ETFDHQ16134 617 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 FBXL22Q6P050 247 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 CALHM3Q86XJ0 350 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 C4orf36Q96KX1 117 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 C1QTNF2Q9BXJ5 285 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 SEC11CQ9BY50 192 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 SPHK2Q9NRA0 654 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 GMPR2Q9P2T1 348 aaKnown RBP5.54□□□□□ -1.52
SCN1A-212ENST00000636194 NPIPB6E9PJ23 425 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 HS3ST1O14792 307 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 RAD1O60671 282 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 SYT8Q8NBV8 401 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 SEH1LQ96EE3 360 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 PERPQ96FX8 193 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 C10orf90Q96M02 699 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 PRSS1P07477 247 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 IL1RNP18510 177 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 ERVFC1P60507 584 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 SNRPGP62308 76 aaKnown RBP5.54□□□□□ -1.52
SCN1A-212ENST00000636194 EPGNQ6UW88 154 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 OR2W3Q7Z3T1 314 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 ADGRE4PQ86SQ3 457 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 ILDR1Q86SU0 546 aaPredicted RBP5.54□□□□□ -1.52
SCN1A-212ENST00000636194 SLC25A43Q8WUT9 341 aaPredicted RBP5.54□□□□□ -1.52
SCN1A-212ENST00000636194 DMRTA2Q96SC8 542 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 ZNF426Q9BUY5 554 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 NAA60Q9H7X0 242 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.54□□□□□ -1.52
SCN1A-212ENST00000636194 ROBO2Q9HCK4 1378 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 AQP9O43315 295 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 RNF224P0DH78 156 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 LAMP1P11279 417 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 CTSSP25774 331 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 SLC6A11P48066 632 aa5.54□□□□□ -1.52
SCN1A-212ENST00000636194 GNG4P50150 75 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms