RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-223ENST00000636058 ZNF32P17041 273 aa8.38□□□□□ -1.07
CACNA1A-223ENST00000636058 DCTDP32321 178 aa8.38□□□□□ -1.07
CACNA1A-223ENST00000636058 TTKP33981 857 aa8.38□□□□□ -1.07
CACNA1A-223ENST00000636058 TGFBR2P37173 567 aa8.38□□□□□ -1.07
CACNA1A-223ENST00000636058 TGM4P49221 684 aa8.38□□□□□ -1.07
CACNA1A-223ENST00000636058 RGS6P49758 472 aa8.38□□□□□ -1.07
CACNA1A-223ENST00000636058 GBX2P52951 348 aaPredicted RBP8.38□□□□□ -1.07
CACNA1A-223ENST00000636058 TAS2R43P59537 309 aa8.38□□□□□ -1.07
CACNA1A-223ENST00000636058 PSG4Q00888 419 aa8.38□□□□□ -1.07
CACNA1A-223ENST00000636058 TLE1Q04724 770 aa8.38□□□□□ -1.07
CACNA1A-223ENST00000636058 TPBGQ13641 420 aa8.38□□□□□ -1.07
CACNA1A-223ENST00000636058 RAB35Q15286 201 aa8.38□□□□□ -1.07
CACNA1A-223ENST00000636058 SSX1Q16384 188 aa8.38□□□□□ -1.07
CACNA1A-223ENST00000636058 GABRA6Q16445 453 aa8.38□□□□□ -1.07
CACNA1A-223ENST00000636058 TSTQ16762 297 aaKnown RBP8.38□□□□□ -1.07
CACNA1A-223ENST00000636058 TBRG1Q3YBR2 411 aa8.38□□□□□ -1.07
CACNA1A-223ENST00000636058 SLC36A2Q495M3 483 aa8.38□□□□□ -1.07
CACNA1A-223ENST00000636058 CCDC58Q4VC31 144 aa8.38□□□□□ -1.07
CACNA1A-223ENST00000636058 HIKESHIQ53FT3 197 aa8.38□□□□□ -1.07
CACNA1A-223ENST00000636058 ELFN2Q5R3F8 820 aa8.38□□□□□ -1.07
CACNA1A-223ENST00000636058 SFRP5Q5T4F7 317 aa8.38□□□□□ -1.07
CACNA1A-223ENST00000636058 OR7E24Q6IFN5 339 aa8.38□□□□□ -1.07
CACNA1A-223ENST00000636058 SPATC1Q76KD6 591 aa8.38□□□□□ -1.07
CACNA1A-223ENST00000636058 DPPA2Q7Z7J5 298 aa8.38□□□□□ -1.07
CACNA1A-223ENST00000636058 CXorf67Q86X51 503 aaPredicted RBP8.38□□□□□ -1.07
CACNA1A-223ENST00000636058 LIX1LQ8IVB5 337 aa8.38□□□□□ -1.07
CACNA1A-223ENST00000636058 PHC2Q8IXK0 858 aa8.38□□□□□ -1.07
CACNA1A-223ENST00000636058 YIPF7Q8N8F6 280 aa8.38□□□□□ -1.07
CACNA1A-223ENST00000636058 RELL2Q8NC24 303 aaPredicted RBP8.38□□□□□ -1.07
CACNA1A-223ENST00000636058 FGFBP3Q8TAT2 258 aa8.38□□□□□ -1.07
CACNA1A-223ENST00000636058 RPS4Y2Q8TD47 263 aa8.38□□□□□ -1.07
CACNA1A-223ENST00000636058 YIPF6Q96EC8 236 aa8.38□□□□□ -1.07
CACNA1A-223ENST00000636058 ATF6BQ99941 703 aa8.38□□□□□ -1.07
CACNA1A-223ENST00000636058 OR2H1Q9GZK4 316 aa8.38□□□□□ -1.07
CACNA1A-223ENST00000636058 HDHD2Q9H0R4 259 aa8.38□□□□□ -1.07
CACNA1A-223ENST00000636058 CENPMQ9NSP4 180 aa8.38□□□□□ -1.07
CACNA1A-223ENST00000636058 ST6GALNAC2Q9UJ37 374 aa8.38□□□□□ -1.07
CACNA1A-223ENST00000636058 FBXL3Q9UKT7 428 aa8.38□□□□□ -1.07
CACNA1A-223ENST00000636058 GRIP1Q9Y3R0 1128 aa8.38□□□□□ -1.07
CACNA1A-223ENST00000636058 SIRT4Q9Y6E7 314 aaPredicted RBP8.38□□□□□ -1.07
CACNA1A-223ENST00000636058 POLEQ07864 2286 aa8.38□□□□□ -1.07
CACNA1A-223ENST00000636058 ARPC4-TTLL3A0A0A6YYG9 625 aa8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 SMIM31A0A1B0GVY4 71 aa8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 CIB4A0PJX0 185 aa8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 OR6C6A6NF89 314 aa8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 B8ZZF3 427 aa8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 CCRL2O00421 344 aa8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 OGG1O15527 345 aa8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 SGCEO43556 437 aa8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 PLPP2O43688 288 aa8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 SYNGR3O43761 229 aa8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 DOK2O60496 412 aa8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 SRSF10O75494 262 aaKnown RBP8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 RPP14O95059 124 aaKnown RBP8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 UBL3O95164 117 aa8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 HLA-HP01893 362 aa8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 PATE4P0C8F1 98 aa8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 HOXB1P14653 301 aaPredicted RBP8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 PSMB1P20618 241 aaKnown RBP8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 OTX1P32242 354 aaPredicted RBP8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 ARR3P36575 388 aa8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 PSMB10P40306 273 aa8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 RIDAP52758 137 aaKnown RBP8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 NANOS3P60323 173 aaKnown RBP8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 GRB2P62993 217 aaKnown RBP8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 GPR50Q13585 617 aa8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 CDK5R1Q15078 307 aa8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 KRTAP27-1Q3LI81 207 aa8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 LIPKQ5VXJ0 399 aa8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 DMKNQ6E0U4 476 aaPredicted RBP8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 ZNF774Q6NX45 483 aa8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 FDX2Q6P4F2 183 aa8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 RPL22L1Q6P5R6 122 aaKnown RBP8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 STAC2Q6ZMT1 411 aa8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 LUZP2Q86TE4 346 aa8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 CCDC36Q8IYA8 594 aa8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 C17orf78Q8N4C9 275 aa8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 ZFP41Q8N8Y5 198 aa8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 NANOS1Q8WY41 292 aaKnown RBP8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 HSD17B8Q92506 261 aa8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 UFD1Q92890 307 aa8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 FUNDC2Q9BWH2 189 aa8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 RBM38Q9H0Z9 239 aaKnown RBP8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 WNT5BQ9H1J7 359 aa8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 NIPAL2Q9H841 368 aa8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 NOX3Q9HBY0 568 aa8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 NDUFB11Q9NX14 153 aa8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 GALNT8Q9NY28 637 aa8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 B3GNT2Q9NY97 397 aa8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 PLEK2Q9NYT0 353 aa8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 ATPIF1Q9UII2 106 aa8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 SLC5A6Q9Y289 635 aa8.37□□□□□ -1.07
CACNA1A-223ENST00000636058 COL6A6A6NMZ7 2263 aa8.36□□□□□ -1.07
CACNA1A-223ENST00000636058 A0A1B0GUH1 482 aa8.36□□□□□ -1.07
CACNA1A-223ENST00000636058 EEF1E1-BLOC1S5C9J1V9 151 aa8.36□□□□□ -1.07
CACNA1A-223ENST00000636058 EEF1E1O43324 174 aaKnown RBP8.36□□□□□ -1.07
CACNA1A-223ENST00000636058 PNPP00491 289 aa8.36□□□□□ -1.07
CACNA1A-223ENST00000636058 PRB1P04280 392 aa8.36□□□□□ -1.07
CACNA1A-223ENST00000636058 CD1AP06126 327 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms