RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 PRODH2Q9UF12 536 aa13.31□□□□□ -0.28
CACNA1A-220ENST00000635988 MEX3AA1L020 520 aaKnown RBP13.3□□□□□ -0.28
CACNA1A-220ENST00000635988 FITM1A5D6W6 292 aa13.3□□□□□ -0.28
CACNA1A-220ENST00000635988 POM121BA6NF01 834 aa13.3□□□□□ -0.28
CACNA1A-220ENST00000635988 SCDO00767 359 aa13.3□□□□□ -0.28
CACNA1A-220ENST00000635988 ZNF264O43296 627 aa13.3□□□□□ -0.28
CACNA1A-220ENST00000635988 TIMP1P01033 207 aa13.3□□□□□ -0.28
CACNA1A-220ENST00000635988 IFNA6P05013 189 aa13.3□□□□□ -0.28
CACNA1A-220ENST00000635988 S100A8P05109 93 aa13.3□□□□□ -0.28
CACNA1A-220ENST00000635988 SPARCP09486 303 aa13.3□□□□□ -0.28
CACNA1A-220ENST00000635988 MAOAP21397 527 aa13.3□□□□□ -0.28
CACNA1A-220ENST00000635988 PAX6P26367 422 aa13.3□□□□□ -0.28
CACNA1A-220ENST00000635988 KCNJ3P48549 501 aa13.3□□□□□ -0.28
CACNA1A-220ENST00000635988 EIF5AP63241 154 aaKnown RBP13.3□□□□□ -0.28
CACNA1A-220ENST00000635988 FUT7Q11130 342 aa13.3□□□□□ -0.28
CACNA1A-220ENST00000635988 OR7A5Q15622 319 aa13.3□□□□□ -0.28
CACNA1A-220ENST00000635988 PAQR4Q8N4S7 273 aaPredicted RBP13.3□□□□□ -0.28
CACNA1A-220ENST00000635988 OR13C3Q8NGS6 347 aa13.3□□□□□ -0.28
CACNA1A-220ENST00000635988 METTL21AQ8WXB1 218 aa13.3□□□□□ -0.28
CACNA1A-220ENST00000635988 TAAR8Q969N4 342 aa13.3□□□□□ -0.28
CACNA1A-220ENST00000635988 CYTL1Q9NRR1 136 aa13.3□□□□□ -0.28
CACNA1A-220ENST00000635988 LPAR3Q9UBY5 353 aa13.3□□□□□ -0.28
CACNA1A-220ENST00000635988 GDF2Q9UK05 429 aaPredicted RBP13.3□□□□□ -0.28
CACNA1A-220ENST00000635988 NOSIPQ9Y314 301 aaKnown RBP13.3□□□□□ -0.28
CACNA1A-220ENST00000635988 C13orf42A0A1B0GVH6 325 aa13.3□□□□□ -0.28
CACNA1A-220ENST00000635988 CLDN4O14493 209 aa13.3□□□□□ -0.28
CACNA1A-220ENST00000635988 FAM157CP0CG43 387 aa13.3□□□□□ -0.28
CACNA1A-220ENST00000635988 SMIM6P0DI80 62 aa13.3□□□□□ -0.28
CACNA1A-220ENST00000635988 SERPINF1P36955 418 aa13.3□□□□□ -0.28
CACNA1A-220ENST00000635988 SRSF3P84103 164 aaKnown RBP13.3□□□□□ -0.28
CACNA1A-220ENST00000635988 BIKQ13323 160 aa13.3□□□□□ -0.28
CACNA1A-220ENST00000635988 PEA15Q15121 130 aa13.3□□□□□ -0.28
CACNA1A-220ENST00000635988 EIF5AL1Q6IS14 154 aaKnown RBP13.3□□□□□ -0.28
CACNA1A-220ENST00000635988 ACBD4Q8NC06 268 aa13.3□□□□□ -0.28
CACNA1A-220ENST00000635988 ZNF563Q8TA94 476 aa13.3□□□□□ -0.28
CACNA1A-220ENST00000635988 ADAMTS18Q8TE60 1221 aa13.3□□□□□ -0.28
CACNA1A-220ENST00000635988 TMED6Q8WW62 240 aa13.3□□□□□ -0.28
CACNA1A-220ENST00000635988 FAM46BQ96A09 425 aa13.3□□□□□ -0.28
CACNA1A-220ENST00000635988 MRGPRFQ96AM1 343 aa13.3□□□□□ -0.28
CACNA1A-220ENST00000635988 NRIP2Q9BQI9 281 aa13.3□□□□□ -0.28
CACNA1A-220ENST00000635988 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.3□□□□□ -0.28
CACNA1A-220ENST00000635988 SELENOIQ9C0D9 397 aa13.3□□□□□ -0.28
CACNA1A-220ENST00000635988 RNF122Q9H9V4 155 aa13.3□□□□□ -0.28
CACNA1A-220ENST00000635988 PRTFDC1Q9NRG1 225 aa13.3□□□□□ -0.28
CACNA1A-220ENST00000635988 STARD5Q9NSY2 213 aa13.3□□□□□ -0.28
CACNA1A-220ENST00000635988 RCC2Q9P258 522 aaKnown RBP13.3□□□□□ -0.28
CACNA1A-220ENST00000635988 LOC100509620A0A075B734 347 aa13.29□□□□□ -0.28
CACNA1A-220ENST00000635988 A0A0B4J2A0 478 aa13.29□□□□□ -0.28
CACNA1A-220ENST00000635988 PRSS37A4D1T9 235 aa13.29□□□□□ -0.28
CACNA1A-220ENST00000635988 ZNF705EA8MWA4 302 aaPredicted RBP13.29□□□□□ -0.28
CACNA1A-220ENST00000635988 APBB3O95704 486 aa13.29□□□□□ -0.28
CACNA1A-220ENST00000635988 ISG15P05161 165 aa13.29□□□□□ -0.28
CACNA1A-220ENST00000635988 AKR1C4P17516 323 aa13.29□□□□□ -0.28
CACNA1A-220ENST00000635988 SLC6A9P48067 706 aa13.29□□□□□ -0.28
CACNA1A-220ENST00000635988 MFGE8Q08431 387 aaPredicted RBP13.29□□□□□ -0.28
CACNA1A-220ENST00000635988 CD226Q15762 336 aa13.29□□□□□ -0.28
CACNA1A-220ENST00000635988 OOSP2Q86WS3 158 aa13.29□□□□□ -0.28
CACNA1A-220ENST00000635988 TSACCQ96A04 125 aaPredicted RBP13.29□□□□□ -0.28
CACNA1A-220ENST00000635988 C8orf44Q96CB5 159 aa13.29□□□□□ -0.28
CACNA1A-220ENST00000635988 NKX3-1Q99801 234 aaPredicted RBP13.29□□□□□ -0.28
CACNA1A-220ENST00000635988 HRASLS2Q9NWW9 162 aa13.29□□□□□ -0.28
CACNA1A-220ENST00000635988 SHPKQ9UHJ6 478 aa13.29□□□□□ -0.28
CACNA1A-220ENST00000635988 WIF1Q9Y5W5 379 aa13.29□□□□□ -0.28
CACNA1A-220ENST00000635988 HEATR5AQ86XA9 2040 aa13.29□□□□□ -0.28
CACNA1A-220ENST00000635988 TGFBR3LH3BV60 316 aa13.29□□□□□ -0.28
CACNA1A-220ENST00000635988 RAB27BO00194 218 aa13.29□□□□□ -0.28
CACNA1A-220ENST00000635988 S100A9P06702 114 aaKnown RBP13.29□□□□□ -0.28
CACNA1A-220ENST00000635988 ITGB8P26012 769 aa13.29□□□□□ -0.28
CACNA1A-220ENST00000635988 SLC6A8P48029 635 aa13.29□□□□□ -0.28
CACNA1A-220ENST00000635988 GSK3AP49840 483 aa13.29□□□□□ -0.28
CACNA1A-220ENST00000635988 CAV2P51636 162 aa13.29□□□□□ -0.28
CACNA1A-220ENST00000635988 SPOCK1Q08629 439 aa13.29□□□□□ -0.28
CACNA1A-220ENST00000635988 HYAL4Q2M3T9 481 aa13.29□□□□□ -0.28
CACNA1A-220ENST00000635988 ZNF704Q6ZNC4 412 aaPredicted RBP13.29□□□□□ -0.28
CACNA1A-220ENST00000635988 MED25Q71SY5 747 aa13.29□□□□□ -0.28
CACNA1A-220ENST00000635988 ELP5Q8TE02 316 aa13.29□□□□□ -0.28
CACNA1A-220ENST00000635988 WNT2BQ93097 391 aa13.29□□□□□ -0.28
CACNA1A-220ENST00000635988 PPP1R14AQ96A00 147 aa13.29□□□□□ -0.28
CACNA1A-220ENST00000635988 RNF126Q9BV68 326 aa13.29□□□□□ -0.28
CACNA1A-220ENST00000635988 RNF208Q9H0X6 261 aa13.29□□□□□ -0.28
CACNA1A-220ENST00000635988 RHOFQ9HBH0 211 aa13.29□□□□□ -0.28
CACNA1A-220ENST00000635988 R4GMQ9 66 aa13.29□□□□□ -0.28
CACNA1A-220ENST00000635988 OIP5O43482 229 aa13.28□□□□□ -0.28
CACNA1A-220ENST00000635988 RPL27P61353 136 aaKnown RBP13.28□□□□□ -0.28
CACNA1A-220ENST00000635988 EIF2B1Q14232 305 aaKnown RBP13.28□□□□□ -0.28
CACNA1A-220ENST00000635988 GFOD2Q3B7J2 385 aa13.28□□□□□ -0.28
CACNA1A-220ENST00000635988 OR10K2Q6IF99 312 aa13.28□□□□□ -0.28
CACNA1A-220ENST00000635988 CBLN3Q6UW01 205 aa13.28□□□□□ -0.28
CACNA1A-220ENST00000635988 MAMDC2Q7Z304 686 aaPredicted RBP13.28□□□□□ -0.28
CACNA1A-220ENST00000635988 FRMD1Q8N878 549 aa13.28□□□□□ -0.28
CACNA1A-220ENST00000635988 OR51A2Q8NGJ7 313 aa13.28□□□□□ -0.28
CACNA1A-220ENST00000635988 C2CD4CQ8TF44 421 aa13.28□□□□□ -0.28
CACNA1A-220ENST00000635988 NUDT16L1Q9BRJ7 211 aaKnown RBP13.28□□□□□ -0.28
CACNA1A-220ENST00000635988 ABHD6Q9BV23 337 aa13.28□□□□□ -0.28
CACNA1A-220ENST00000635988 ADAM19Q9H013 955 aa13.28□□□□□ -0.28
CACNA1A-220ENST00000635988 SMCO4Q9NRQ5 59 aa13.28□□□□□ -0.28
CACNA1A-220ENST00000635988 EDARQ9UNE0 448 aa13.28□□□□□ -0.28
CACNA1A-220ENST00000635988 LRP12Q9Y561 859 aa13.28□□□□□ -0.28
CACNA1A-220ENST00000635988 TRAV36DV7A0A075B6V5 113 aa13.28□□□□□ -0.28
CACNA1A-220ENST00000635988 TNFRSF10CO14798 259 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms