RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 IGFBP5P24593 272 aa13.35□□□□□ -0.27
LINC00339-209ENST00000635450 IL2RGP31785 369 aa13.35□□□□□ -0.27
LINC00339-209ENST00000635450 HTR5AP47898 357 aa13.35□□□□□ -0.27
LINC00339-209ENST00000635450 CHRFAM7AQ494W8 412 aa13.35□□□□□ -0.27
LINC00339-209ENST00000635450 C1orf174Q8IYL3 243 aa13.35□□□□□ -0.27
LINC00339-209ENST00000635450 ATG16L2Q8NAA4 619 aa13.35□□□□□ -0.27
LINC00339-209ENST00000635450 CYB561A3Q8NBI2 242 aa13.35□□□□□ -0.27
LINC00339-209ENST00000635450 NPEPL1Q8NDH3 523 aa13.35□□□□□ -0.27
LINC00339-209ENST00000635450 PROKR2Q8NFJ6 384 aa13.35□□□□□ -0.27
LINC00339-209ENST00000635450 GJC3Q8NFK1 279 aa13.35□□□□□ -0.27
LINC00339-209ENST00000635450 OR1J1Q8NGS3 322 aa13.35□□□□□ -0.27
LINC00339-209ENST00000635450 OR2T4Q8NH00 348 aa13.35□□□□□ -0.27
LINC00339-209ENST00000635450 NRBF2Q96F24 287 aa13.35□□□□□ -0.27
LINC00339-209ENST00000635450 SYT3Q9BQG1 590 aa13.35□□□□□ -0.27
LINC00339-209ENST00000635450 PIMREGQ9BSJ6 248 aa13.35□□□□□ -0.27
LINC00339-209ENST00000635450 CDADC1Q9BWV3 514 aa13.35□□□□□ -0.27
LINC00339-209ENST00000635450 TPK1Q9H3S4 243 aa13.35□□□□□ -0.27
LINC00339-209ENST00000635450 ELOVL3Q9HB03 270 aa13.35□□□□□ -0.27
LINC00339-209ENST00000635450 KIF17Q9P2E2 1029 aa13.35□□□□□ -0.27
LINC00339-209ENST00000635450 ASH2LQ9UBL3 628 aa13.35□□□□□ -0.27
LINC00339-209ENST00000635450 GPR160Q9UJ42 338 aa13.35□□□□□ -0.27
LINC00339-209ENST00000635450 FZR1Q9UM11 496 aa13.35□□□□□ -0.27
LINC00339-209ENST00000635450 AP4S1Q9Y587 144 aa13.35□□□□□ -0.27
LINC00339-209ENST00000635450 LOC100509620A0A075B734 347 aa13.34□□□□□ -0.27
LINC00339-209ENST00000635450 A0A1W2PPW3 197 aa13.34□□□□□ -0.27
LINC00339-209ENST00000635450 LRP5LA4QPB2 252 aa13.34□□□□□ -0.27
LINC00339-209ENST00000635450 RIIAD1A6NNX1 92 aa13.34□□□□□ -0.27
LINC00339-209ENST00000635450 LYNX1G3V0Z9 82 aa13.34□□□□□ -0.27
LINC00339-209ENST00000635450 GPANK1O95872 356 aa13.34□□□□□ -0.27
LINC00339-209ENST00000635450 ADRA2AP08913 450 aa13.34□□□□□ -0.27
LINC00339-209ENST00000635450 LYNX1P0DP58 116 aa13.34□□□□□ -0.27
LINC00339-209ENST00000635450 GAAP10253 952 aa13.34□□□□□ -0.27
LINC00339-209ENST00000635450 ZNF3P17036 446 aa13.34□□□□□ -0.27
LINC00339-209ENST00000635450 FASP25445 335 aa13.34□□□□□ -0.27
LINC00339-209ENST00000635450 POU1F1P28069 291 aa13.34□□□□□ -0.27
LINC00339-209ENST00000635450 KLF3P57682 345 aaPredicted RBP13.34□□□□□ -0.27
LINC00339-209ENST00000635450 TEKQ02763 1124 aa13.34□□□□□ -0.27
LINC00339-209ENST00000635450 MEP1BQ16820 701 aa13.34□□□□□ -0.27
LINC00339-209ENST00000635450 OTPQ5XKR4 325 aa13.34□□□□□ -0.27
LINC00339-209ENST00000635450 SHQ1Q6PI26 577 aaKnown RBP13.34□□□□□ -0.27
LINC00339-209ENST00000635450 ASRGL1Q7L266 308 aa13.34□□□□□ -0.27
LINC00339-209ENST00000635450 LRP11Q86VZ4 500 aa13.34□□□□□ -0.27
LINC00339-209ENST00000635450 SLC37A3Q8NCC5 494 aa13.34□□□□□ -0.27
LINC00339-209ENST00000635450 SLC26A10Q8NG04 563 aa13.34□□□□□ -0.27
LINC00339-209ENST00000635450 OR4Q3Q8NH05 313 aa13.34□□□□□ -0.27
LINC00339-209ENST00000635450 SYNPRQ8TBG9 265 aa13.34□□□□□ -0.27
LINC00339-209ENST00000635450 NEU4Q8WWR8 484 aaPredicted RBP13.34□□□□□ -0.27
LINC00339-209ENST00000635450 MSI2Q96DH6 328 aaKnown RBP13.34□□□□□ -0.27
LINC00339-209ENST00000635450 MS4A5Q9H3V2 200 aa13.34□□□□□ -0.27
LINC00339-209ENST00000635450 CHODLQ9H9P2 273 aa13.34□□□□□ -0.27
LINC00339-209ENST00000635450 REV1Q9UBZ9 1251 aa13.34□□□□□ -0.27
LINC00339-209ENST00000635450 FCGR1AP12314 374 aa13.33□□□□□ -0.28
LINC00339-209ENST00000635450 OSMP13725 252 aa13.33□□□□□ -0.28
LINC00339-209ENST00000635450 ZNF823P16415 610 aa13.33□□□□□ -0.28
LINC00339-209ENST00000635450 PRKACGP22612 351 aa13.33□□□□□ -0.28
LINC00339-209ENST00000635450 GCH1P30793 250 aa13.33□□□□□ -0.28
LINC00339-209ENST00000635450 GRK5P34947 590 aa13.33□□□□□ -0.28
LINC00339-209ENST00000635450 ERVS71-1P61550 626 aa13.33□□□□□ -0.28
LINC00339-209ENST00000635450 SRSF2Q01130 221 aaKnown RBP13.33□□□□□ -0.28
LINC00339-209ENST00000635450 CCNIQ14094 377 aa13.33□□□□□ -0.28
LINC00339-209ENST00000635450 MAD2L1BPQ15013 274 aaPredicted RBP13.33□□□□□ -0.28
LINC00339-209ENST00000635450 MOGQ16653 247 aa13.33□□□□□ -0.28
LINC00339-209ENST00000635450 NKPD1Q17RQ9 610 aa13.33□□□□□ -0.28
LINC00339-209ENST00000635450 ZNF718Q3SXZ3 478 aa13.33□□□□□ -0.28
LINC00339-209ENST00000635450 CYB5R2Q6BCY4 276 aa13.33□□□□□ -0.28
LINC00339-209ENST00000635450 SLC27A4Q6P1M0 643 aa13.33□□□□□ -0.28
LINC00339-209ENST00000635450 VASH1Q7L8A9 365 aaPredicted RBP13.33□□□□□ -0.28
LINC00339-209ENST00000635450 HS3ST5Q8IZT8 346 aa13.33□□□□□ -0.28
LINC00339-209ENST00000635450 OR2AJ1Q8NGZ0 328 aa13.33□□□□□ -0.28
LINC00339-209ENST00000635450 OR5K1Q8NHB7 308 aa13.33□□□□□ -0.28
LINC00339-209ENST00000635450 ABHD4Q8TB40 342 aa13.33□□□□□ -0.28
LINC00339-209ENST00000635450 SNX33Q8WV41 574 aa13.33□□□□□ -0.28
LINC00339-209ENST00000635450 DNAJC9Q8WXX5 260 aa13.33□□□□□ -0.28
LINC00339-209ENST00000635450 UTP4Q969X6 686 aaKnown RBP13.33□□□□□ -0.28
LINC00339-209ENST00000635450 C4orf45Q96LM5 186 aa13.33□□□□□ -0.28
LINC00339-209ENST00000635450 TEX12Q9BXU0 123 aa13.33□□□□□ -0.28
LINC00339-209ENST00000635450 MYOZ1Q9NP98 299 aaPredicted RBP13.33□□□□□ -0.28
LINC00339-209ENST00000635450 SLCO1C1Q9NYB5 712 aa13.33□□□□□ -0.28
LINC00339-209ENST00000635450 LOC390937A0A1W2PQ73 354 aa13.32□□□□□ -0.28
LINC00339-209ENST00000635450 NDUFS8O00217 210 aa13.32□□□□□ -0.28
LINC00339-209ENST00000635450 RER1O15258 196 aa13.32□□□□□ -0.28
LINC00339-209ENST00000635450 ABHD16AO95870 558 aa13.32□□□□□ -0.28
LINC00339-209ENST00000635450 DAOP14920 347 aa13.32□□□□□ -0.28
LINC00339-209ENST00000635450 ZNF250P15622 560 aa13.32□□□□□ -0.28
LINC00339-209ENST00000635450 PYCR1P32322 319 aa13.32□□□□□ -0.28
LINC00339-209ENST00000635450 WNT5AP41221 380 aa13.32□□□□□ -0.28
LINC00339-209ENST00000635450 ALDH3B1P43353 468 aa13.32□□□□□ -0.28
LINC00339-209ENST00000635450 CRMP1Q14194 572 aa13.32□□□□□ -0.28
LINC00339-209ENST00000635450 TRIP10Q15642 601 aa13.32□□□□□ -0.28
LINC00339-209ENST00000635450 ATP6AP1Q15904 470 aa13.32□□□□□ -0.28
LINC00339-209ENST00000635450 PHC2Q8IXK0 858 aa13.32□□□□□ -0.28
LINC00339-209ENST00000635450 ZNF101Q8IZC7 436 aa13.32□□□□□ -0.28
LINC00339-209ENST00000635450 OR9Q1Q8NGQ5 310 aa13.32□□□□□ -0.28
LINC00339-209ENST00000635450 OR1F12Q8NHA8 337 aa13.32□□□□□ -0.28
LINC00339-209ENST00000635450 DUS3LQ96G46 650 aaKnown RBP13.32□□□□□ -0.28
LINC00339-209ENST00000635450 NTN4Q9HB63 628 aa13.32□□□□□ -0.28
LINC00339-209ENST00000635450 CMC2Q9NRP2 79 aa13.32□□□□□ -0.28
LINC00339-209ENST00000635450 TAAR3PQ9P1P4 343 aa13.32□□□□□ -0.28
LINC00339-209ENST00000635450 ATPIF1Q9UII2 106 aa13.32□□□□□ -0.28
LINC00339-209ENST00000635450 KCNG2Q9UJ96 466 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms