RNA–Protein interactions for RNA: ENST00000635030.1

SMARCA2-233, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 4

Gene SMARCA2, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-233	ENST00000635030	BMP5	P22003	454 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	FCAR	P24071	287 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	CXCR1	P25024	350 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	PRDX3	P30048	256 aa	Known RBP	4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	GNRHR	P30968	328 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	RPL29	P47914	159 aa	Known RBP	4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	GABRA4	P48169	554 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	CX3CR1	P49238	355 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	NOVA1	P51513	510 aa	Known RBP	4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	STC1	P52823	247 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	GAS1	P54826	345 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	SLC37A1	P57057	533 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	ACVR1	Q04771	509 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	UBE2V1	Q13404	147 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	RUNX2	Q13950	521 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	ZNF235	Q14590	738 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	MEF2D	Q14814	521 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	PCGF3	Q3KNV8	242 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	ZNF789	Q5FWF6	425 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	ZNF311	Q5JNZ3	666 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	COA6	Q5JTJ3	125 aa	Known RBP	4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	C1orf189	Q5VU69	101 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	WSCD1	Q658N2	575 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	TRIM40	Q6P9F5	258 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	PSRC1	Q6PGN9	363 aa	Predicted RBP	4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	PRSS57	Q6UWY2	283 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	MEX3B	Q6ZN04	569 aa	Known RBP	4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	CLEC20A	Q6ZU45	233 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	SLC25A26	Q70HW3	274 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	SMIM5	Q71RC9	77 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	CEACAM19	Q7Z692	300 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	C5orf24	Q7Z6I8	188 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	MRGPRE	Q86SM8	312 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	LINC01551	Q86U37	167 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	PIM3	Q86V86	326 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	GLB1L2	Q8IW92	636 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	KRTCAP2	Q8N6L1	136 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	ZFP41	Q8N8Y5	198 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	ZNF738	Q8NE65	137 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	OR4C5	Q8NGB2	326 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	OR4S1	Q8NGB4	309 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	OR52B4	Q8NGK2	314 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	OR1P1	Q8NH06	330 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	LYPD6B	Q8NI32	183 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	CD300LF	Q8TDQ1	290 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	DUSP19	Q8WTR2	217 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	UBTD2	Q8WUN7	234 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	SECTM1	Q8WVN6	248 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	SPRYD4	Q8WW59	207 aa	Predicted RBP	4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	ZCCHC14	Q8WYQ9	949 aa	Known RBP	4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	OR1E3	Q8WZA6	343 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	DCUN1D4	Q92564	292 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	CDS1	Q92903	461 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	KISS1R	Q969F8	398 aa	Predicted RBP	4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	NTNG2	Q96CW9	530 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	CXorf40B	Q96DE9	158 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	IMP4	Q96G21	291 aa	Known RBP	4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	ALKBH3	Q96Q83	286 aa	Predicted RBP	4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	NDC1	Q9BTX1	674 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	MRPL13	Q9BYD1	178 aa	Known RBP	4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	GLIS2	Q9BZE0	524 aa	Predicted RBP	4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	SLITRK2	Q9H156	845 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	WDR13	Q9H1Z4	485 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	NELFA	Q9H3P2	528 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	ZNF430	Q9H8G1	570 aa	Predicted RBP	4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	IPPK	Q9H8X2	491 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	MKKS	Q9NPJ1	570 aa	Predicted RBP	4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	TMEM184C	Q9NVA4	438 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	H2AFY2	Q9P0M6	372 aa	Predicted RBP	4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	SIX4	Q9UIU6	781 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	ZNF223	Q9UK11	482 aa	Predicted RBP	4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	FARSA	Q9Y285	508 aa	Known RBP	4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	STRAP	Q9Y3F4	350 aa	Known RBP	4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	PLXNB3	Q9ULL4	1909 aa		4.79	□□□□□ -1.64
SMARCA2-233	ENST00000635030	DOCK4	Q8N1I0	1966 aa		4.78	□□□□□ -1.64
SMARCA2-233	ENST00000635030	PLXNA2	O75051	1894 aa		4.78	□□□□□ -1.64
SMARCA2-233	ENST00000635030	TRAV30	A0A087WSZ9	112 aa		4.78	□□□□□ -1.64
SMARCA2-233	ENST00000635030	TMEM272	A0A1B0GTI8	110 aa		4.78	□□□□□ -1.64
SMARCA2-233	ENST00000635030		A0A1W2PPE2	198 aa		4.78	□□□□□ -1.64
SMARCA2-233	ENST00000635030	XKRY2	A2RUG3	117 aa		4.78	□□□□□ -1.64
SMARCA2-233	ENST00000635030		A6NNC1	897 aa		4.78	□□□□□ -1.64
SMARCA2-233	ENST00000635030	VSTM5	A8MXK1	200 aa		4.78	□□□□□ -1.64
SMARCA2-233	ENST00000635030		H0Y8G0	127 aa		4.78	□□□□□ -1.64
SMARCA2-233	ENST00000635030		K7EPK0	472 aa		4.78	□□□□□ -1.64
SMARCA2-233	ENST00000635030	RAB27B	O00194	218 aa		4.78	□□□□□ -1.64
SMARCA2-233	ENST00000635030	SEPT4	O43236	478 aa		4.78	□□□□□ -1.64
SMARCA2-233	ENST00000635030	TSPAN6	O43657	245 aa		4.78	□□□□□ -1.64
SMARCA2-233	ENST00000635030	NME6	O75414	186 aa	Predicted RBP	4.78	□□□□□ -1.64
SMARCA2-233	ENST00000635030	TNFSF15	O95150	251 aa		4.78	□□□□□ -1.64
SMARCA2-233	ENST00000635030	KAT7	O95251	611 aa		4.78	□□□□□ -1.64
SMARCA2-233	ENST00000635030	KNG1	P01042	644 aa		4.78	□□□□□ -1.64
SMARCA2-233	ENST00000635030	GAPDH	P04406	335 aa	Known RBP	4.78	□□□□□ -1.64
SMARCA2-233	ENST00000635030	ARG1	P05089	322 aa		4.78	□□□□□ -1.64
SMARCA2-233	ENST00000635030	CTSL	P07711	333 aa		4.78	□□□□□ -1.64
SMARCA2-233	ENST00000635030	HOXC6	P09630	235 aa		4.78	□□□□□ -1.64
SMARCA2-233	ENST00000635030	SLC35G6	P0C7Q6	338 aa		4.78	□□□□□ -1.64
SMARCA2-233	ENST00000635030	OR2T7	P0C7T2	308 aa		4.78	□□□□□ -1.64
SMARCA2-233	ENST00000635030	TRGC1	P0CF51	173 aa		4.78	□□□□□ -1.64
SMARCA2-233	ENST00000635030	TMIGD3	P0DMS9	266 aa	Predicted RBP	4.78	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms