RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 LRRTM1Q86UE6 522 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 CTAGE6Q86UF2 777 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 LRRC6Q86X45 466 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 TGIF2LYQ8IUE0 185 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 CRLF3Q8IUI8 442 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 PHC2Q8IXK0 858 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 KRT222Q8N1A0 295 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 ZCCHC7Q8N3Z6 543 aaKnown RBP1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 CSNK1A1LQ8N752 337 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 TTC29Q8NA56 475 aaPredicted RBP1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 AQP11Q8NBQ7 271 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 BEST4Q8NFU0 473 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 OR52K1Q8NGK4 314 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 OR52J3Q8NH60 311 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 FAM57AQ8TBR7 257 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 M1APQ8TC57 530 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 CD200R1Q8TD46 325 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 AGAP11Q8TF27 550 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 SPRYD4Q8WW59 207 aaPredicted RBP1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 ELMO1Q92556 727 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 NRGNQ92686 78 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 RAD51AP1Q96B01 352 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 UPRTQ96BW1 309 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 DCUN1D1Q96GG9 259 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 AKR1E2Q96JD6 320 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 CNDP1Q96KN2 507 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 ART5Q96L15 291 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 FAM173AQ9BQD7 235 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 SLC30A2Q9BRI3 323 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 PYGO2Q9BRQ0 406 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 DPH7Q9BTV6 452 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 CABLES2Q9BTV7 478 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 ALG12Q9BV10 488 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 KIFC1Q9BW19 673 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 IL1RL2Q9HB29 575 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 DCAF13Q9NV06 445 aaKnown RBP1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 C1orf123Q9NWV4 160 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 SMPD3Q9NY59 655 aaPredicted RBP1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 TAS2R16Q9NYV7 291 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 C6orf203Q9P0P8 240 aaPredicted RBP1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 STOX2Q9P2F5 926 aaPredicted RBP1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 GALPQ9UBC7 116 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 ASIC3Q9UHC3 531 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 ZNF346Q9UL40 294 aaKnown RBP1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 EXOSC1Q9Y3B2 195 aaKnown RBP1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 FBXO7Q9Y3I1 522 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 L3MBTL1Q9Y468 752 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 OR10H1Q9Y4A9 318 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 SCN3AQ9NY46 2000 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 MGAM2Q2M2H8 2515 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 CR1P17927 2039 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 PINLYPA6NC86 204 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 MFSD2BA6NFX1 497 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 SAGE2PA6NJ88 616 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 GABRR3A8MPY1 467 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 H7C0C1 242 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 SOCS3O14543 225 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 TM9SF1O15321 606 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 ARHGEF9O43307 516 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 ZSCAN12O43309 604 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 OR1F1O43749 312 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 IDH3BO43837 385 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 GALR3O60755 368 aaPredicted RBP1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 ZNF354AO60765 605 aaPredicted RBP1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 RAMP1O60894 148 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 DNAJB6O75190 326 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 NIPSNAP2O75323 286 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 RDH16O75452 317 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 CTAG2O75638 210 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 SCELO95171 688 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 WISP3O95389 354 aaPredicted RBP1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 NUDT14O95848 222 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 F10P00742 488 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 OPN1LWP04000 364 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 SNRPCP09234 159 aaKnown RBP1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 SMIM10L1P0DMW3 83 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 ICAM2P13598 275 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 H2AFXP16104 143 aaPredicted RBP1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 ZNF24P17028 368 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 IL1RNP18510 177 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 KLK2P20151 261 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 TPSB2P20231 275 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 OGNP20774 298 aaKnown RBP1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 ZNF10P21506 573 aaPredicted RBP1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 NT5EP21589 574 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 CMPK1P30085 196 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 PPP2R1BP30154 601 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 FDFT1P37268 417 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 COILP38432 576 aaPredicted RBP1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 SLC1A2P43004 574 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 XCR1P46094 333 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 ATP5OP48047 213 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 RGS4P49798 205 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 EMDP50402 254 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 HLCSP50747 726 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 IST1P53990 364 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 EMP2P54851 167 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 RWDD2BP57060 319 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 MLF1P58340 268 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 DSCR10P59022 87 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms