RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 ANKRD9Q96BM1 317 aaPredicted RBP10.4□□□□□ -0.74
LINC00538-201ENST00000626109 FAM46AQ96IP4 442 aaKnown RBP10.4□□□□□ -0.74
LINC00538-201ENST00000626109 PACRGQ96M98 296 aaPredicted RBP10.4□□□□□ -0.74
LINC00538-201ENST00000626109 MCHR1Q99705 422 aa10.4□□□□□ -0.74
LINC00538-201ENST00000626109 RERGLQ9H628 205 aa10.4□□□□□ -0.74
LINC00538-201ENST00000626109 CALHM2Q9HA72 323 aa10.4□□□□□ -0.74
LINC00538-201ENST00000626109 EQTNQ9NQ60 294 aa10.4□□□□□ -0.74
LINC00538-201ENST00000626109 ASB6Q9NWX5 421 aa10.4□□□□□ -0.74
LINC00538-201ENST00000626109 ZNF175Q9Y473 711 aa10.4□□□□□ -0.74
LINC00538-201ENST00000626109 FER1L5A0AVI2 2057 aa10.4□□□□□ -0.74
LINC00538-201ENST00000626109 OR2W5A6NFC9 320 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 TMEM238C9JI98 176 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 NPIPA7E9PJI5 369 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 ARPC3O15145 178 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 CTDSPLO15194 276 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 SURF4O15260 269 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 WIPF1O43516 503 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 SLC19A2O60779 497 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 NOS1APO75052 506 aaPredicted RBP10.39□□□□□ -0.75
LINC00538-201ENST00000626109 ALOX12BO75342 701 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 KLF7O75840 302 aaPredicted RBP10.39□□□□□ -0.75
LINC00538-201ENST00000626109 CSF3P09919 207 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 OR2T7P0C7T2 308 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 RNF224P0DH78 156 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 NPIPA8P0DM63 369 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 SLC6A9P48067 706 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 NKX2-5P52952 324 aaPredicted RBP10.39□□□□□ -0.75
LINC00538-201ENST00000626109 FOXL2P58012 376 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 HSF2Q03933 536 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 BIKQ13323 160 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 QPRTQ15274 297 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 TGIF1Q15583 401 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 NSDHLQ15738 373 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 PYHIN1Q6K0P9 492 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 PRSS57Q6UWY2 283 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 ABHD12BQ7Z5M8 362 aaPredicted RBP10.39□□□□□ -0.75
LINC00538-201ENST00000626109 WFDC3Q8IUB2 231 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 RDH10Q8IZV5 341 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 LRRC25Q8N386 305 aaPredicted RBP10.39□□□□□ -0.75
LINC00538-201ENST00000626109 LNX2Q8N448 690 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 OR9A2Q8NGT5 310 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 ACOT12Q8WYK0 555 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 TSLPQ969D9 159 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 OTULINQ96BN8 352 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 MS4A4EQ96PG1 132 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 NEDD4LQ96PU5 975 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 SEC22CQ9BRL7 303 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 CTDSP1Q9GZU7 261 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 MIXL1Q9H2W2 232 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 C19orf25Q9UFG5 118 aaPredicted RBP10.39□□□□□ -0.75
LINC00538-201ENST00000626109 KCNE3Q9Y6H6 103 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 NUP210LQ5VU65 1888 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 CCDC88CQ9P219 2028 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 SPEGQ15772 3267 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 IGKV3D-11A0A0A0MRZ8 115 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 MBD3L4A6NDZ8 208 aaPredicted RBP10.39□□□□□ -0.75
LINC00538-201ENST00000626109 MBD3L3A6NE82 208 aaPredicted RBP10.39□□□□□ -0.75
LINC00538-201ENST00000626109 GNB5O14775 395 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 SSX4O60224 188 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 OR10H2O60403 315 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 CD3EP07766 207 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 LIMS3P0CW19 117 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 LIMS4P0CW20 117 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 SLC2A2P11168 524 aaPredicted RBP10.39□□□□□ -0.75
LINC00538-201ENST00000626109 CPMP14384 443 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 INPP1P49441 399 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 CNN1P51911 297 aaKnown RBP10.39□□□□□ -0.75
LINC00538-201ENST00000626109 RPS18P62269 152 aaKnown RBP10.39□□□□□ -0.75
LINC00538-201ENST00000626109 IGLV3-21P80748 117 aaPredicted RBP10.39□□□□□ -0.75
LINC00538-201ENST00000626109 FABP5Q01469 135 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 RBPJQ06330 500 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 TAB1Q15750 504 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 PGGHGQ32M88 737 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 CLEC12AQ5QGZ9 265 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 LHFPL3Q86UP9 236 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 RANBP3LQ86VV4 465 aaPredicted RBP10.39□□□□□ -0.75
LINC00538-201ENST00000626109 TM9SF4Q92544 642 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 ZNF681Q96N22 645 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 WNT10AQ9GZT5 417 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 RNF121Q9H920 327 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 NTMQ9P121 344 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 CDH10Q9Y6N8 788 aa10.39□□□□□ -0.75
LINC00538-201ENST00000626109 IFNA16P05015 189 aa10.38□□□□□ -0.75
LINC00538-201ENST00000626109 UMODP07911 640 aa10.38□□□□□ -0.75
LINC00538-201ENST00000626109 SLC35E2P0CK97 266 aa10.38□□□□□ -0.75
LINC00538-201ENST00000626109 F8A1P23610 371 aa10.38□□□□□ -0.75
LINC00538-201ENST00000626109 MYL9P24844 172 aa10.38□□□□□ -0.75
LINC00538-201ENST00000626109 HLA-DMAP28067 261 aa10.38□□□□□ -0.75
LINC00538-201ENST00000626109 MAGEB1P43366 347 aa10.38□□□□□ -0.75
LINC00538-201ENST00000626109 MLF1P58340 268 aa10.38□□□□□ -0.75
LINC00538-201ENST00000626109 ZNF750Q32MQ0 723 aa10.38□□□□□ -0.75
LINC00538-201ENST00000626109 ARHGAP11BQ3KRB8 267 aa10.38□□□□□ -0.75
LINC00538-201ENST00000626109 RPL13AP3Q6NVV1 102 aa10.38□□□□□ -0.75
LINC00538-201ENST00000626109 PLET1Q6UQ28 207 aa10.38□□□□□ -0.75
LINC00538-201ENST00000626109 SLC35D2Q76EJ3 337 aa10.38□□□□□ -0.75
LINC00538-201ENST00000626109 OLIG3Q7RTU3 272 aa10.38□□□□□ -0.75
LINC00538-201ENST00000626109 HMGN2P46Q86SG4 172 aa10.38□□□□□ -0.75
LINC00538-201ENST00000626109 KLBQ86Z14 1044 aa10.38□□□□□ -0.75
LINC00538-201ENST00000626109 RNF113BQ8IZP6 322 aaKnown RBP10.38□□□□□ -0.75
LINC00538-201ENST00000626109 FAM89BQ8N5H3 189 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms