RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 C1orf174Q8IYL3 243 aa5.49□□□□□ -1.53
TCF4-249ENST00000625716 ZCCHC24Q8N2G6 241 aaKnown RBP5.49□□□□□ -1.53
TCF4-249ENST00000625716 SYT8Q8NBV8 401 aa5.49□□□□□ -1.53
TCF4-249ENST00000625716 OR52L1Q8NGH7 329 aa5.49□□□□□ -1.53
TCF4-249ENST00000625716 OR1J1Q8NGS3 322 aa5.49□□□□□ -1.53
TCF4-249ENST00000625716 AKR7LQ8NHP1 331 aa5.49□□□□□ -1.53
TCF4-249ENST00000625716 BCAS4Q8TDM0 211 aa5.49□□□□□ -1.53
TCF4-249ENST00000625716 GNPDA2Q8TDQ7 276 aa5.49□□□□□ -1.53
TCF4-249ENST00000625716 NABP1Q96AH0 204 aa5.49□□□□□ -1.53
TCF4-249ENST00000625716 NMD3Q96D46 503 aaKnown RBP5.49□□□□□ -1.53
TCF4-249ENST00000625716 DHRS1Q96LJ7 313 aa5.49□□□□□ -1.53
TCF4-249ENST00000625716 FOXN4Q96NZ1 517 aa5.49□□□□□ -1.53
TCF4-249ENST00000625716 ERMAPQ96PL5 475 aaPredicted RBP5.49□□□□□ -1.53
TCF4-249ENST00000625716 TRIM15Q9C019 465 aa5.49□□□□□ -1.53
TCF4-249ENST00000625716 OR2H1Q9GZK4 316 aa5.49□□□□□ -1.53
TCF4-249ENST00000625716 TPK1Q9H3S4 243 aa5.49□□□□□ -1.53
TCF4-249ENST00000625716 ELOVL3Q9HB03 270 aa5.49□□□□□ -1.53
TCF4-249ENST00000625716 IL1RAPQ9NPH3 570 aa5.49□□□□□ -1.53
TCF4-249ENST00000625716 NRIP3Q9NQ35 241 aa5.49□□□□□ -1.53
TCF4-249ENST00000625716 DECR2Q9NUI1 292 aa5.49□□□□□ -1.53
TCF4-249ENST00000625716 PRR13Q9NZ81 148 aa5.49□□□□□ -1.53
TCF4-249ENST00000625716 TAAR3PQ9P1P4 343 aa5.49□□□□□ -1.53
TCF4-249ENST00000625716 NDRG4Q9ULP0 352 aaKnown RBP5.49□□□□□ -1.53
TCF4-249ENST00000625716 PRPF19Q9UMS4 504 aaKnown RBP5.49□□□□□ -1.53
TCF4-249ENST00000625716 PLA2G2DQ9UNK4 145 aa5.49□□□□□ -1.53
TCF4-249ENST00000625716 SIGLEC7Q9Y286 467 aa5.49□□□□□ -1.53
TCF4-249ENST00000625716 POLR1DQ9Y2S0 133 aa5.49□□□□□ -1.53
TCF4-249ENST00000625716 PRR14LQ5THK1 2151 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 PLSCR5A0PG75 271 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 A8MV72 311 aaPredicted RBP5.48□□□□□ -1.53
TCF4-249ENST00000625716 NUDT19A8MXV4 375 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 GNGT2O14610 69 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 IMPA2O14732 288 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 SGCEO43556 437 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 IDH3BO43837 385 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 CCNB2O95067 398 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 PPP1R3DO95685 299 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 HLA-DQA2P01906 255 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 SEMG1P04279 462 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 NAT2P11245 290 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 APEHP13798 732 aaKnown RBP5.48□□□□□ -1.53
TCF4-249ENST00000625716 ZNF250P15622 560 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 GSTM3P21266 225 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 FPR3P25089 353 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 GZMKP49863 264 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 TSPAN31Q12999 210 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 AQP6Q13520 282 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 MAD2L1BPQ15013 274 aaPredicted RBP5.48□□□□□ -1.53
TCF4-249ENST00000625716 TMEM249Q2WGJ8 235 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 PCGF3Q3KNV8 242 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 ALKBH6Q3KRA9 238 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 RPL13AP3Q6NVV1 102 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 ZNF774Q6NX45 483 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 C1orf94Q6P1W5 598 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 LEG1Q6P5S2 330 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 PGM2L1Q6PCE3 622 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 UGT2A3Q6UWM9 527 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 FOXL2NBQ6ZUU3 175 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 TRPM8Q7Z2W7 1104 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 ZER1Q7Z7L7 766 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 LRP11Q86VZ4 500 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 ZNF786Q8N393 782 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 PAQR4Q8N4S7 273 aaPredicted RBP5.48□□□□□ -1.53
TCF4-249ENST00000625716 CPEB3Q8NE35 698 aaKnown RBP5.48□□□□□ -1.53
TCF4-249ENST00000625716 RDH5Q92781 318 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 RASD2Q96D21 266 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 SAMD8Q96LT4 415 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 GPX7Q96SL4 187 aaPredicted RBP5.48□□□□□ -1.53
TCF4-249ENST00000625716 THTPAQ9BU02 230 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 ZNF416Q9BWM5 594 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 NUAK2Q9H093 628 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 WNT5BQ9H1J7 359 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 C1orf21Q9H246 121 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 SYT4Q9H2B2 425 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 OR52D1Q9H346 318 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 MAGIXQ9H6Y5 334 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 REEP1Q9H902 201 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 EMC7Q9NPA0 242 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 HINT3Q9NQE9 182 aaKnown RBP5.48□□□□□ -1.53
TCF4-249ENST00000625716 POLE4Q9NR33 117 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 PLEK2Q9NYT0 353 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 VSX1Q9NZR4 365 aaPredicted RBP5.48□□□□□ -1.53
TCF4-249ENST00000625716 COA3Q9Y2R0 106 aaPredicted RBP5.48□□□□□ -1.53
TCF4-249ENST00000625716 ROS1P08922 2347 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 ARID1AO14497 2285 aa5.48□□□□□ -1.53
TCF4-249ENST00000625716 TEP1Q99973 2627 aaKnown RBP5.47□□□□□ -1.53
TCF4-249ENST00000625716 USF3Q68DE3 2245 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 LOC100509620A0A075B734 347 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 C17orf100A8MU93 164 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 VWC2LB2RUY7 222 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 ARPC3O15145 178 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 GYG2O15488 501 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 DOK2O60496 412 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 CRLF1O75462 422 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 ABHD16AO95870 558 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 TXNDC12O95881 172 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 CLPTM1O96005 669 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 IFNA2P01563 188 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 RAP2AP10114 183 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 COX5BP10606 129 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms