RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 NKAIN3Q8N8D7 197 aa11.6□□□□□ -0.55
MSH6-215ENST00000622629 TM4SF19Q96DZ7 209 aa11.6□□□□□ -0.55
MSH6-215ENST00000622629 SARGQ9BW04 601 aa11.6□□□□□ -0.55
MSH6-215ENST00000622629 SHPKQ9UHJ6 478 aa11.6□□□□□ -0.55
MSH6-215ENST00000622629 ZNF223Q9UK11 482 aaPredicted RBP11.6□□□□□ -0.55
MSH6-215ENST00000622629 OIP5O43482 229 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 PTP4A3O75365 173 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 MPZL1O95297 269 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 THY1P04216 161 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 FOLR1P15328 257 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 PVALBP20472 110 aaPredicted RBP11.59□□□□□ -0.55
MSH6-215ENST00000622629 TAS2R31P59538 309 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 PLP2Q04941 152 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 CD200R1LQ6Q8B3 271 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 C17orf107Q6ZR85 190 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 GRAMD2AQ8IUY3 354 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 SGPP2Q8IWX5 399 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 RELL2Q8NC24 303 aaPredicted RBP11.59□□□□□ -0.55
MSH6-215ENST00000622629 KCNG3Q8TAE7 436 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 PIGTQ969N2 578 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 MENTQ9BUN1 341 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 VN1R1Q9GZP7 353 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 PPA2Q9H2U2 334 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 SLCO5A1Q9H2Y9 848 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 LDAHQ9H6V9 325 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 PCDHB16Q9NRJ7 776 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 SLC17A2O00624 439 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 RGS13O14921 159 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 FOXS1O43638 330 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 SRFP11831 508 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 CTLA4P16410 223 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 NAGAP17050 411 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 PI3P19957 117 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 ADH6P28332 368 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 RAB2AP61019 212 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 UBE2IP63279 158 aaKnown RBP11.59□□□□□ -0.55
MSH6-215ENST00000622629 RNF4P78317 190 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 C21orf62-AS1Q17RA5 79 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 OR4S1Q8NGB4 309 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 CD300LFQ8TDQ1 290 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 FOXJ3Q9UPW0 622 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 LRP12Q9Y561 859 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 FBXO24O75426 580 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 UBBP0CG47 229 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 PRKACAP17612 351 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 POU3F3P20264 500 aaPredicted RBP11.59□□□□□ -0.55
MSH6-215ENST00000622629 ALOX5APP20292 161 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 APOBEC1P41238 236 aaKnown RBP11.59□□□□□ -0.55
MSH6-215ENST00000622629 P2RX3P56373 397 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 FOXL2P58012 376 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 PWWP2BQ6NUJ5 590 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 MDGA2Q7Z553 956 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 SLC51BQ86UW2 128 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 OR1L3Q8NH93 324 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 NAT6Q93015 286 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 CDX2Q99626 313 aaPredicted RBP11.59□□□□□ -0.55
MSH6-215ENST00000622629 TPOP07202 933 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 GPR3P46089 330 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 MAP2K6P52564 334 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 MTCP1P56278 107 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 MC2RQ01718 297 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 RFPL4BQ6ZWI9 263 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 FJX1Q86VR8 437 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 ZC3HAV1LQ96H79 300 aaKnown RBP11.59□□□□□ -0.55
MSH6-215ENST00000622629 RADILQ96JH8 1075 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 TINAGL1Q9GZM7 467 aaPredicted RBP11.59□□□□□ -0.55
MSH6-215ENST00000622629 OR10A2Q9H208 303 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 DLL4Q9NR61 685 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 SLC22A11Q9NSA0 550 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 FRRS1LQ9P0K9 344 aa11.59□□□□□ -0.55
MSH6-215ENST00000622629 A0A0D9SG52 128 aa11.58□□□□□ -0.56
MSH6-215ENST00000622629 OR2J2O76002 312 aa11.58□□□□□ -0.56
MSH6-215ENST00000622629 GLSO94925 669 aaPredicted RBP11.58□□□□□ -0.56
MSH6-215ENST00000622629 FOXF1Q12946 379 aa11.58□□□□□ -0.56
MSH6-215ENST00000622629 ARL6IP1Q15041 203 aa11.58□□□□□ -0.56
MSH6-215ENST00000622629 TOR2AQ5JU69 321 aa11.58□□□□□ -0.56
MSH6-215ENST00000622629 SYT13Q7L8C5 426 aa11.58□□□□□ -0.56
MSH6-215ENST00000622629 SULF2Q8IWU5 870 aa11.58□□□□□ -0.56
MSH6-215ENST00000622629 OR1N1Q8NGS0 311 aa11.58□□□□□ -0.56
MSH6-215ENST00000622629 STK35Q8TDR2 534 aa11.58□□□□□ -0.56
MSH6-215ENST00000622629 HRH4Q9H3N8 390 aa11.58□□□□□ -0.56
MSH6-215ENST00000622629 NCOR1O75376 2440 aa11.58□□□□□ -0.56
MSH6-215ENST00000622629 BORCS7-ASMTA0A0B4J1R7 106 aa11.58□□□□□ -0.56
MSH6-215ENST00000622629 SLC33A1O00400 549 aaPredicted RBP11.58□□□□□ -0.56
MSH6-215ENST00000622629 GLB1P16278 677 aa11.58□□□□□ -0.56
MSH6-215ENST00000622629 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.58□□□□□ -0.56
MSH6-215ENST00000622629 C19orf48Q6RUI8 117 aa11.58□□□□□ -0.56
MSH6-215ENST00000622629 OR11H7Q8NGC8 314 aa11.58□□□□□ -0.56
MSH6-215ENST00000622629 OR56B1Q8NGI3 324 aa11.58□□□□□ -0.56
MSH6-215ENST00000622629 OR51A4Q8NGJ6 313 aa11.58□□□□□ -0.56
MSH6-215ENST00000622629 ARL11Q969Q4 196 aa11.58□□□□□ -0.56
MSH6-215ENST00000622629 WDR89Q96FK6 387 aaPredicted RBP11.58□□□□□ -0.56
MSH6-215ENST00000622629 MED30Q96HR3 178 aa11.58□□□□□ -0.56
MSH6-215ENST00000622629 UQCC2Q9BRT2 126 aa11.58□□□□□ -0.56
MSH6-215ENST00000622629 SDHAF2Q9NX18 166 aa11.58□□□□□ -0.56
MSH6-215ENST00000622629 UBE2J1Q9Y385 318 aaPredicted RBP11.58□□□□□ -0.56
MSH6-215ENST00000622629 NLRC5Q86WI3 1866 aa11.58□□□□□ -0.56
MSH6-215ENST00000622629 SPTA1P02549 2419 aa11.58□□□□□ -0.56
MSH6-215ENST00000622629 C4orf47A7E2U8 309 aa11.58□□□□□ -0.56
MSH6-215ENST00000622629 DBHP09172 617 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms