RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 HIST1H3AP68431 136 aa12.5□□□□□ -0.41
CLTCL1-212ENST00000622493 FAPQ12884 760 aa12.5□□□□□ -0.41
CLTCL1-212ENST00000622493 PRR30Q53SZ7 412 aaPredicted RBP12.5□□□□□ -0.41
CLTCL1-212ENST00000622493 HIST2H3PS2Q5TEC6 136 aa12.5□□□□□ -0.41
CLTCL1-212ENST00000622493 FDX2Q6P4F2 183 aa12.5□□□□□ -0.41
CLTCL1-212ENST00000622493 CD200R1LQ6Q8B3 271 aa12.5□□□□□ -0.41
CLTCL1-212ENST00000622493 TFAP2EQ6VUC0 442 aa12.5□□□□□ -0.41
CLTCL1-212ENST00000622493 SEM1Q6ZVN7 128 aa12.5□□□□□ -0.41
CLTCL1-212ENST00000622493 NCCRP1Q6ZVX7 275 aaPredicted RBP12.5□□□□□ -0.41
CLTCL1-212ENST00000622493 HIST2H3AQ71DI3 136 aa12.5□□□□□ -0.41
CLTCL1-212ENST00000622493 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.5□□□□□ -0.41
CLTCL1-212ENST00000622493 CENPSQ8N2Z9 138 aa12.5□□□□□ -0.41
CLTCL1-212ENST00000622493 LRRC18Q8N456 261 aa12.5□□□□□ -0.41
CLTCL1-212ENST00000622493 MS4A15Q8N5U1 240 aa12.5□□□□□ -0.41
CLTCL1-212ENST00000622493 ZFP41Q8N8Y5 198 aa12.5□□□□□ -0.41
CLTCL1-212ENST00000622493 NIPAL2Q9H841 368 aa12.5□□□□□ -0.41
CLTCL1-212ENST00000622493 PLSCR4Q9NRQ2 329 aa12.5□□□□□ -0.41
CLTCL1-212ENST00000622493 PRSS50Q9UI38 385 aa12.5□□□□□ -0.41
CLTCL1-212ENST00000622493 LRP12Q9Y561 859 aa12.5□□□□□ -0.41
CLTCL1-212ENST00000622493 SIRT4Q9Y6E7 314 aaPredicted RBP12.5□□□□□ -0.41
CLTCL1-212ENST00000622493 SPENQ96T58 3664 aaKnown RBP12.49□□□□□ -0.41
CLTCL1-212ENST00000622493 ARHGAP21Q5T5U3 1957 aa12.49□□□□□ -0.41
CLTCL1-212ENST00000622493 TRBV2A0A0J9YWF9 115 aa12.49□□□□□ -0.41
CLTCL1-212ENST00000622493 PNMA8CA0A1B0GUJ8 204 aa12.49□□□□□ -0.41
CLTCL1-212ENST00000622493 A0A1W2PPW3 197 aa12.49□□□□□ -0.41
CLTCL1-212ENST00000622493 GPRIN2O60269 458 aa12.49□□□□□ -0.41
CLTCL1-212ENST00000622493 H2BFMP0C1H6 154 aa12.49□□□□□ -0.41
CLTCL1-212ENST00000622493 B4GALT1P15291 398 aa12.49□□□□□ -0.41
CLTCL1-212ENST00000622493 CRYBB2P43320 205 aa12.49□□□□□ -0.41
CLTCL1-212ENST00000622493 CCR9P51686 369 aa12.49□□□□□ -0.41
CLTCL1-212ENST00000622493 NFATC3Q12968 1075 aa12.49□□□□□ -0.41
CLTCL1-212ENST00000622493 OR7E24Q6IFN5 339 aa12.49□□□□□ -0.41
CLTCL1-212ENST00000622493 ZNF544Q6NX49 715 aa12.49□□□□□ -0.41
CLTCL1-212ENST00000622493 ZNF813Q6ZN06 617 aa12.49□□□□□ -0.41
CLTCL1-212ENST00000622493 CFAP77Q6ZQR2 320 aa12.49□□□□□ -0.41
CLTCL1-212ENST00000622493 DOLPP1Q86YN1 238 aa12.49□□□□□ -0.41
CLTCL1-212ENST00000622493 CNEP1R1Q8N9A8 125 aa12.49□□□□□ -0.41
CLTCL1-212ENST00000622493 PGLYRP3Q96LB9 341 aa12.49□□□□□ -0.41
CLTCL1-212ENST00000622493 OR51E2Q9H255 320 aa12.49□□□□□ -0.41
CLTCL1-212ENST00000622493 CENPMQ9NSP4 180 aa12.49□□□□□ -0.41
CLTCL1-212ENST00000622493 SSR3Q9UNL2 185 aa12.49□□□□□ -0.41
CLTCL1-212ENST00000622493 GRIP1Q9Y3R0 1128 aa12.49□□□□□ -0.41
CLTCL1-212ENST00000622493 FREM1Q5H8C1 2179 aa12.49□□□□□ -0.41
CLTCL1-212ENST00000622493 PRRC2CQ9Y520 2896 aaKnown RBP12.49□□□□□ -0.41
CLTCL1-212ENST00000622493 TLN1Q9Y490 2541 aaKnown RBP12.48□□□□□ -0.41
CLTCL1-212ENST00000622493 RER1O15258 196 aa12.48□□□□□ -0.41
CLTCL1-212ENST00000622493 TNFSF13O75888 250 aa12.48□□□□□ -0.41
CLTCL1-212ENST00000622493 TOXO94900 526 aa12.48□□□□□ -0.41
CLTCL1-212ENST00000622493 RPP14O95059 124 aaKnown RBP12.48□□□□□ -0.41
CLTCL1-212ENST00000622493 NR4A1P22736 598 aa12.48□□□□□ -0.41
CLTCL1-212ENST00000622493 CEACAM8P31997 349 aaPredicted RBP12.48□□□□□ -0.41
CLTCL1-212ENST00000622493 PSMB10P40306 273 aa12.48□□□□□ -0.41
CLTCL1-212ENST00000622493 GRB2P62993 217 aaKnown RBP12.48□□□□□ -0.41
CLTCL1-212ENST00000622493 ARF1P84077 181 aaKnown RBP12.48□□□□□ -0.41
CLTCL1-212ENST00000622493 SCRN3Q0VDG4 424 aa12.48□□□□□ -0.41
CLTCL1-212ENST00000622493 ALKBH1Q13686 389 aaKnown RBP12.48□□□□□ -0.41
CLTCL1-212ENST00000622493 RGS21Q2M5E4 152 aa12.48□□□□□ -0.41
CLTCL1-212ENST00000622493 ARL9Q6T311 187 aa12.48□□□□□ -0.41
CLTCL1-212ENST00000622493 KLHL24Q6TFL4 600 aa12.48□□□□□ -0.41
CLTCL1-212ENST00000622493 Q6ZT83 130 aa12.48□□□□□ -0.41
CLTCL1-212ENST00000622493 SLC16A14Q7RTX9 510 aa12.48□□□□□ -0.41
CLTCL1-212ENST00000622493 OR10S1Q8NGN2 331 aa12.48□□□□□ -0.41
CLTCL1-212ENST00000622493 HTRA1Q92743 480 aa12.48□□□□□ -0.41
CLTCL1-212ENST00000622493 GHSRQ92847 366 aa12.48□□□□□ -0.41
CLTCL1-212ENST00000622493 RPL3LQ92901 407 aaKnown RBP12.48□□□□□ -0.41
CLTCL1-212ENST00000622493 RNF166Q96A37 237 aaPredicted RBP12.48□□□□□ -0.41
CLTCL1-212ENST00000622493 FBXO17Q96EF6 278 aa12.48□□□□□ -0.41
CLTCL1-212ENST00000622493 CHCHD6Q9BRQ6 235 aa12.48□□□□□ -0.41
CLTCL1-212ENST00000622493 PNRC2Q9NPJ4 139 aaKnown RBP12.48□□□□□ -0.41
CLTCL1-212ENST00000622493 DDX28Q9NUL7 540 aaKnown RBP12.48□□□□□ -0.41
CLTCL1-212ENST00000622493 TIMM10BQ9Y5J6 103 aa12.48□□□□□ -0.41
CLTCL1-212ENST00000622493 CACNA1CQ13936 2221 aa12.48□□□□□ -0.41
CLTCL1-212ENST00000622493 MAP1BP46821 2468 aaKnown RBP12.48□□□□□ -0.41
CLTCL1-212ENST00000622493 TRDV1A0A1B0GX56 115 aa12.48□□□□□ -0.41
CLTCL1-212ENST00000622493 GPX5O75715 221 aa12.48□□□□□ -0.41
CLTCL1-212ENST00000622493 SERPINA3P01011 423 aa12.48□□□□□ -0.41
CLTCL1-212ENST00000622493 TMIGD3P0DMS9 266 aaPredicted RBP12.48□□□□□ -0.41
CLTCL1-212ENST00000622493 CTSSP25774 331 aa12.48□□□□□ -0.41
CLTCL1-212ENST00000622493 FGF9P31371 208 aaPredicted RBP12.48□□□□□ -0.41
CLTCL1-212ENST00000622493 GDI2P50395 445 aaKnown RBP12.48□□□□□ -0.41
CLTCL1-212ENST00000622493 MMP16P51512 607 aa12.48□□□□□ -0.41
CLTCL1-212ENST00000622493 BMXP51813 675 aa12.48□□□□□ -0.41
CLTCL1-212ENST00000622493 RPS25P62851 125 aaKnown RBP12.48□□□□□ -0.41
CLTCL1-212ENST00000622493 TGFBR3Q03167 851 aa12.48□□□□□ -0.41
CLTCL1-212ENST00000622493 LY6DQ14210 128 aa12.48□□□□□ -0.41
CLTCL1-212ENST00000622493 DPPA2Q7Z7J5 298 aa12.48□□□□□ -0.41
CLTCL1-212ENST00000622493 OR2G2Q8NGZ5 317 aa12.48□□□□□ -0.41
CLTCL1-212ENST00000622493 TMEM203Q969S6 136 aa12.48□□□□□ -0.41
CLTCL1-212ENST00000622493 TMED9Q9BVK6 235 aa12.48□□□□□ -0.41
CLTCL1-212ENST00000622493 R4GMQ9 66 aa12.48□□□□□ -0.41
CLTCL1-212ENST00000622493 NCOA6Q14686 2063 aaPredicted RBP12.48□□□□□ -0.41
CLTCL1-212ENST00000622493 ARPC4-TTLL3A0A0A6YYG9 625 aa12.47□□□□□ -0.41
CLTCL1-212ENST00000622493 LOC100506127A0A0U1RQW1 187 aa12.47□□□□□ -0.41
CLTCL1-212ENST00000622493 WNT11O96014 354 aa12.47□□□□□ -0.41
CLTCL1-212ENST00000622493 CD8BP10966 210 aa12.47□□□□□ -0.41
CLTCL1-212ENST00000622493 HSD11B1P28845 292 aa12.47□□□□□ -0.41
CLTCL1-212ENST00000622493 NANOS3P60323 173 aaKnown RBP12.47□□□□□ -0.41
CLTCL1-212ENST00000622493 VBP1P61758 197 aa12.47□□□□□ -0.41
CLTCL1-212ENST00000622493 SLC3A1Q07837 685 aa12.47□□□□□ -0.41
CLTCL1-212ENST00000622493 FOXF2Q12947 444 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms