RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 MRGPRX3Q96LB0 322 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 SAMD8Q96LT4 415 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 TMUB1Q9BVT8 246 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 MYOTQ9UBF9 498 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 TRPC4Q9UBN4 977 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 GOLGA4Q13439 2230 aaKnown RBP7.17□□□□□ -1.26
VPS11-209ENST00000622309 ZSWIM8A7E2V4 1837 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 SLC22A31A6NKX4 558 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 ANKRD66B4E2M5 251 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 GAPDHSO14556 408 aaPredicted RBP7.17□□□□□ -1.26
VPS11-209ENST00000622309 EIF1AYO14602 144 aaKnown RBP7.17□□□□□ -1.26
VPS11-209ENST00000622309 INSIG1O15503 277 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 GPRIN2O60269 458 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 PRAMEF11O60813 436 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 C8GP07360 202 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 ELFN1P0C7U0 828 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 KCNE1P15382 129 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 TBPP20226 339 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 CHATP28329 748 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 EIF1AXP47813 144 aaKnown RBP7.17□□□□□ -1.26
VPS11-209ENST00000622309 SULT1A2P50226 295 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 PNLIPRP1P54315 467 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 CDC42EP1Q00587 391 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 EFEMP1Q12805 493 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 EXOSC6Q5RKV6 272 aaKnown RBP7.17□□□□□ -1.26
VPS11-209ENST00000622309 PRAMEF14Q5SWL7 426 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 ZNF774Q6NX45 483 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 ZNF620Q6ZNG0 422 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 ZNF573Q86YE8 665 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 TUSC5Q8IXB3 177 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 FAM185AQ8N0U4 392 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 SLC35G3Q8N808 338 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 OR1N1Q8NGS0 311 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 OR13D1Q8NGV5 346 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 ZCCHC14Q8WYQ9 949 aaKnown RBP7.17□□□□□ -1.26
VPS11-209ENST00000622309 TNFRSF14Q92956 283 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 TM4SF18Q96CE8 201 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 SMIM19Q96E16 107 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 DEFB118Q96PH6 123 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 DIRC2Q96SL1 478 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 CRLS1Q9UJA2 301 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 PADI3Q9ULW8 664 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 MRPS33Q9Y291 106 aaKnown RBP7.17□□□□□ -1.26
VPS11-209ENST00000622309 MSRB2Q9Y3D2 182 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 ETV7Q9Y603 341 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 TRAV18A0A075B6X5 111 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 A0A0G2JN53 185 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 ZNF727A8MUV8 499 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 GCGP01275 180 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 CLEC3BP05452 202 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 GALTP07902 379 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 FURINP09958 794 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 GABRR1P24046 479 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 CTSSP25774 331 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 PCSK1P29120 753 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 IL13RA1P78552 427 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 LTBQ06643 244 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 ZNF616Q08AN1 781 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 BATFQ16520 125 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 XKR4Q5GH76 650 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 SOHLH1Q5JUK2 328 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 MED27Q6P2C8 311 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 WDR88Q6ZMY6 472 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 Q7L0L9 218 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 FAM129CQ86XR2 697 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 GABRG1Q8N1C3 465 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 MFSD8Q8NHS3 518 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 OTUB2Q96DC9 234 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 RCC1LQ96I51 464 aaKnown RBP7.17□□□□□ -1.26
VPS11-209ENST00000622309 DNAJC4Q9NNZ3 241 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 GPR173Q9NS66 373 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.17□□□□□ -1.26
VPS11-209ENST00000622309 P4HTMQ9NXG6 502 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 PITPNC1Q9UKF7 332 aa7.17□□□□□ -1.26
VPS11-209ENST00000622309 TDRD15B5MCY1 1934 aaKnown RBP7.16□□□□□ -1.26
VPS11-209ENST00000622309 A0A087WV62 115 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 A0A0U1RQV5 110 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 CST2P09228 141 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 MMP7P09237 267 aaPredicted RBP7.16□□□□□ -1.26
VPS11-209ENST00000622309 TAS2R50P59544 299 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 ACTBP60709 375 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 SNRPNP63162 240 aaKnown RBP7.16□□□□□ -1.26
VPS11-209ENST00000622309 ACTG1P63261 375 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 EBPQ15125 230 aaKnown RBP7.16□□□□□ -1.26
VPS11-209ENST00000622309 DUSP5Q16690 384 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 PIP5KL1Q5T9C9 394 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 LEMD1Q68G75 181 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 ZNF343Q6P1L6 599 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 TMCO2Q7Z6W1 182 aaPredicted RBP7.16□□□□□ -1.26
VPS11-209ENST00000622309 C17orf64Q86WR6 236 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 COMMD1Q8N668 190 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 OR52L1Q8NGH7 329 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 Q8WTZ3 238 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 OIT3Q8WWZ8 545 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 SNX22Q96L94 193 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 PDCD1LG2Q9BQ51 273 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 G6PC3Q9BUM1 346 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 GPR87Q9BY21 358 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 CNTNAP3Q9BZ76 1288 aa7.16□□□□□ -1.26
VPS11-209ENST00000622309 SLC35B3Q9H1N7 401 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms