RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 ENDOGQ14249 297 aaKnown RBP18.93■□□□□ 0.62
SPAST-204ENST00000621856 ZNF837Q96EG3 531 aaPredicted RBP18.93■□□□□ 0.62
SPAST-204ENST00000621856 WDYHV1Q96HA8 205 aa18.93■□□□□ 0.62
SPAST-204ENST00000621856 G6PC2Q9NQR9 355 aa18.93■□□□□ 0.62
SPAST-204ENST00000621856 ADAM30Q9UKF2 790 aa18.93■□□□□ 0.62
SPAST-204ENST00000621856 TNRC6AQ8NDV7 1962 aaKnown RBP18.93■□□□□ 0.62
SPAST-204ENST00000621856 TRBV5-7A0A0A0MS05 114 aa18.92■□□□□ 0.62
SPAST-204ENST00000621856 KRT33AO76009 404 aa18.92■□□□□ 0.62
SPAST-204ENST00000621856 CPN1P15169 458 aa18.92■□□□□ 0.62
SPAST-204ENST00000621856 MRPS34P82930 218 aaKnown RBP18.92■□□□□ 0.62
SPAST-204ENST00000621856 ZNF704Q6ZNC4 412 aaPredicted RBP18.92■□□□□ 0.62
SPAST-204ENST00000621856 MCEMP1Q8IX19 187 aa18.92■□□□□ 0.62
SPAST-204ENST00000621856 CPT1CQ8TCG5 803 aa18.92■□□□□ 0.62
SPAST-204ENST00000621856 TMEM106AQ96A25 262 aa18.92■□□□□ 0.62
SPAST-204ENST00000621856 NIPAL2Q9H841 368 aa18.92■□□□□ 0.62
SPAST-204ENST00000621856 CALHM2Q9HA72 323 aa18.92■□□□□ 0.62
SPAST-204ENST00000621856 ABCB10Q9NRK6 738 aa18.92■□□□□ 0.62
SPAST-204ENST00000621856 FAM206AQ9NX38 181 aa18.92■□□□□ 0.62
SPAST-204ENST00000621856 TBX1O43435 398 aa18.91■□□□□ 0.62
SPAST-204ENST00000621856 DOK2O60496 412 aa18.91■□□□□ 0.62
SPAST-204ENST00000621856 UPK1BO75841 260 aa18.91■□□□□ 0.62
SPAST-204ENST00000621856 RAF1P04049 648 aa18.91■□□□□ 0.62
SPAST-204ENST00000621856 SLC2A2P11168 524 aaPredicted RBP18.91■□□□□ 0.62
SPAST-204ENST00000621856 NPR2P20594 1047 aa18.91■□□□□ 0.62
SPAST-204ENST00000621856 MMP16P51512 607 aa18.91■□□□□ 0.62
SPAST-204ENST00000621856 CEP78Q5JTW2 689 aa18.91■□□□□ 0.62
SPAST-204ENST00000621856 FAM131AQ6UXB0 335 aa18.91■□□□□ 0.62
SPAST-204ENST00000621856 RHOUQ7L0Q8 258 aa18.91■□□□□ 0.62
SPAST-204ENST00000621856 TUSC5Q8IXB3 177 aa18.91■□□□□ 0.62
SPAST-204ENST00000621856 ZNF433Q8N7K0 673 aaPredicted RBP18.91■□□□□ 0.62
SPAST-204ENST00000621856 GJC3Q8NFK1 279 aa18.91■□□□□ 0.62
SPAST-204ENST00000621856 PARPBPQ9NWS1 579 aa18.91■□□□□ 0.62
SPAST-204ENST00000621856 CLEC4AQ9UMR7 237 aa18.91■□□□□ 0.62
SPAST-204ENST00000621856 DHDHQ9UQ10 334 aa18.91■□□□□ 0.62
SPAST-204ENST00000621856 A0A1B0GVG6 124 aa18.91■□□□□ 0.62
SPAST-204ENST00000621856 SLC19A2O60779 497 aa18.91■□□□□ 0.62
SPAST-204ENST00000621856 ACHEP22303 614 aa18.91■□□□□ 0.62
SPAST-204ENST00000621856 THBS2P35442 1172 aa18.91■□□□□ 0.62
SPAST-204ENST00000621856 PSMA6P60900 246 aaKnown RBP18.91■□□□□ 0.62
SPAST-204ENST00000621856 RNPS1Q15287 305 aaKnown RBP18.91■□□□□ 0.62
SPAST-204ENST00000621856 RIPPLY2Q5TAB7 128 aa18.91■□□□□ 0.62
SPAST-204ENST00000621856 SLCO5A1Q9H2Y9 848 aa18.91■□□□□ 0.62
SPAST-204ENST00000621856 GPR35Q9HC97 309 aa18.91■□□□□ 0.62
SPAST-204ENST00000621856 PNRC2Q9NPJ4 139 aaKnown RBP18.91■□□□□ 0.62
SPAST-204ENST00000621856 V9GYH0 126 aa18.91■□□□□ 0.62
SPAST-204ENST00000621856 FABP12A6NFH5 140 aa18.9■□□□□ 0.62
SPAST-204ENST00000621856 ANKRD61A6NGH8 418 aa18.9■□□□□ 0.62
SPAST-204ENST00000621856 FAM25AB3EWG3 89 aa18.9■□□□□ 0.62
SPAST-204ENST00000621856 FAM25CB3EWG5 89 aa18.9■□□□□ 0.62
SPAST-204ENST00000621856 FAM25GB3EWG6 89 aa18.9■□□□□ 0.62
SPAST-204ENST00000621856 IGHG3P01860 377 aa18.9■□□□□ 0.62
SPAST-204ENST00000621856 UBCP0CG48 685 aaKnown RBP18.9■□□□□ 0.62
SPAST-204ENST00000621856 EPXP11678 715 aa18.9■□□□□ 0.62
SPAST-204ENST00000621856 PRKXP51817 358 aa18.9■□□□□ 0.62
SPAST-204ENST00000621856 GRB2P62993 217 aaKnown RBP18.9■□□□□ 0.62
SPAST-204ENST00000621856 IFITM3Q01628 133 aa18.9■□□□□ 0.62
SPAST-204ENST00000621856 ZNF181Q2M3W8 571 aa18.9■□□□□ 0.62
SPAST-204ENST00000621856 RGS21Q2M5E4 152 aa18.9■□□□□ 0.62
SPAST-204ENST00000621856 CEACAM16Q2WEN9 425 aa18.9■□□□□ 0.62
SPAST-204ENST00000621856 TMEM244Q5VVB8 128 aa18.9■□□□□ 0.62
SPAST-204ENST00000621856 LINGO2Q7L985 606 aa18.9■□□□□ 0.62
SPAST-204ENST00000621856 PBOV1Q9GZY1 135 aa18.9■□□□□ 0.62
SPAST-204ENST00000621856 TMEM38BQ9NVV0 291 aa18.9■□□□□ 0.62
SPAST-204ENST00000621856 HHLA2Q9UM44 414 aa18.9■□□□□ 0.62
SPAST-204ENST00000621856 ARPC4-TTLL3A0A0A6YYG9 625 aa18.89■□□□□ 0.61
SPAST-204ENST00000621856 LOC107986453A0A1B0GWG9 222 aa18.89■□□□□ 0.61
SPAST-204ENST00000621856 ZNF724A8MTY0 619 aa18.89■□□□□ 0.61
SPAST-204ENST00000621856 DLL1O00548 723 aa18.89■□□□□ 0.61
SPAST-204ENST00000621856 ZNF169Q14929 603 aaPredicted RBP18.89■□□□□ 0.61
SPAST-204ENST00000621856 FAM27BQ5VT28 67 aa18.89■□□□□ 0.61
SPAST-204ENST00000621856 CNIH2Q6PI25 160 aa18.89■□□□□ 0.61
SPAST-204ENST00000621856 STAC2Q6ZMT1 411 aa18.89■□□□□ 0.61
SPAST-204ENST00000621856 TRMT10AQ8TBZ6 339 aaKnown RBP18.89■□□□□ 0.61
SPAST-204ENST00000621856 ZCCHC4Q9H5U6 513 aa18.89■□□□□ 0.61
SPAST-204ENST00000621856 MOB1AQ9H8S9 216 aa18.89■□□□□ 0.61
SPAST-204ENST00000621856 RNF122Q9H9V4 155 aa18.89■□□□□ 0.61
SPAST-204ENST00000621856 N6AMT1Q9Y5N5 214 aa18.89■□□□□ 0.61
SPAST-204ENST00000621856 P2RY10O00398 339 aa18.88■□□□□ 0.61
SPAST-204ENST00000621856 ISG15P05161 165 aa18.88■□□□□ 0.61
SPAST-204ENST00000621856 CD2P06729 351 aa18.88■□□□□ 0.61
SPAST-204ENST00000621856 ZNF12P17014 697 aa18.88■□□□□ 0.61
SPAST-204ENST00000621856 ATF1P18846 271 aa18.88■□□□□ 0.61
SPAST-204ENST00000621856 APEX1P27695 318 aaKnown RBP18.88■□□□□ 0.61
SPAST-204ENST00000621856 CX3CR1P49238 355 aa18.88■□□□□ 0.61
SPAST-204ENST00000621856 TSPO2Q5TGU0 170 aa18.88■□□□□ 0.61
SPAST-204ENST00000621856 ZNF283Q8N7M2 679 aa18.88■□□□□ 0.61
SPAST-204ENST00000621856 OR13C3Q8NGS6 347 aa18.88■□□□□ 0.61
SPAST-204ENST00000621856 FOXB1Q99853 325 aa18.88■□□□□ 0.61
SPAST-204ENST00000621856 LINC00470Q9BZP3 86 aa18.88■□□□□ 0.61
SPAST-204ENST00000621856 BCO1Q9HAY6 547 aa18.88■□□□□ 0.61
SPAST-204ENST00000621856 V9GY05 133 aa18.88■□□□□ 0.61
SPAST-204ENST00000621856 NCOA6Q14686 2063 aaPredicted RBP18.88■□□□□ 0.61
SPAST-204ENST00000621856 TRAV8-7A0A075B6U6 113 aa18.88■□□□□ 0.61
SPAST-204ENST00000621856 PAHP00439 452 aa18.88■□□□□ 0.61
SPAST-204ENST00000621856 IGHV3-9P01782 118 aa18.88■□□□□ 0.61
SPAST-204ENST00000621856 YES1P07947 543 aa18.88■□□□□ 0.61
SPAST-204ENST00000621856 AZGP1P25311 298 aaKnown RBP18.88■□□□□ 0.61
SPAST-204ENST00000621856 IGFL3Q6UXB1 125 aa18.88■□□□□ 0.61
SPAST-204ENST00000621856 LUZP2Q86TE4 346 aa18.88■□□□□ 0.61
SPAST-204ENST00000621856 ELMOD2Q8IZ81 293 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms