RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 WDR88Q6ZMY6 472 aa12.53□□□□□ -0.4
CIITA-213ENST00000618327 C9orf40Q8IXQ3 194 aa12.53□□□□□ -0.4
CIITA-213ENST00000618327 STEAP2Q8NFT2 490 aa12.53□□□□□ -0.4
CIITA-213ENST00000618327 OR8D4Q8NGM9 314 aa12.53□□□□□ -0.4
CIITA-213ENST00000618327 HSD17B8Q92506 261 aa12.53□□□□□ -0.4
CIITA-213ENST00000618327 SMIM19Q96E16 107 aa12.53□□□□□ -0.4
CIITA-213ENST00000618327 RANGRFQ9HD47 186 aaPredicted RBP12.53□□□□□ -0.4
CIITA-213ENST00000618327 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.52□□□□□ -0.4
CIITA-213ENST00000618327 ZNF705FA8MVS1 300 aaPredicted RBP12.52□□□□□ -0.4
CIITA-213ENST00000618327 ZNF705DP0CH99 300 aaPredicted RBP12.52□□□□□ -0.4
CIITA-213ENST00000618327 ZNF705BP0CI00 300 aaPredicted RBP12.52□□□□□ -0.4
CIITA-213ENST00000618327 APEX1P27695 318 aaKnown RBP12.52□□□□□ -0.4
CIITA-213ENST00000618327 CX3CR1P49238 355 aa12.52□□□□□ -0.4
CIITA-213ENST00000618327 AKR1C2P52895 323 aa12.52□□□□□ -0.4
CIITA-213ENST00000618327 PPA1Q15181 289 aa12.52□□□□□ -0.4
CIITA-213ENST00000618327 ZNF684Q5T5D7 378 aa12.52□□□□□ -0.4
CIITA-213ENST00000618327 TIGD3Q6B0B8 471 aa12.52□□□□□ -0.4
CIITA-213ENST00000618327 JMJD6Q6NYC1 403 aaPredicted RBP12.52□□□□□ -0.4
CIITA-213ENST00000618327 RRNAD1Q96FB5 475 aaKnown RBP12.52□□□□□ -0.4
CIITA-213ENST00000618327 PTTG3PQ9NZH4 202 aa12.52□□□□□ -0.4
CIITA-213ENST00000618327 KCNS2Q9ULS6 477 aa12.52□□□□□ -0.4
CIITA-213ENST00000618327 OR6C6A6NF89 314 aa12.52□□□□□ -0.41
CIITA-213ENST00000618327 KLK10O43240 276 aa12.52□□□□□ -0.41
CIITA-213ENST00000618327 SNAPINO95295 136 aa12.52□□□□□ -0.41
CIITA-213ENST00000618327 CTSBP07858 339 aa12.52□□□□□ -0.41
CIITA-213ENST00000618327 APEHP13798 732 aaKnown RBP12.52□□□□□ -0.41
CIITA-213ENST00000618327 RAB4BP61018 213 aa12.52□□□□□ -0.41
CIITA-213ENST00000618327 ECH1Q13011 328 aa12.52□□□□□ -0.41
CIITA-213ENST00000618327 TOMM34Q15785 309 aaPredicted RBP12.52□□□□□ -0.41
CIITA-213ENST00000618327 HACD4Q5VWC8 232 aa12.52□□□□□ -0.41
CIITA-213ENST00000618327 SLC22A24Q8N4F4 322 aa12.52□□□□□ -0.41
CIITA-213ENST00000618327 PLPP7Q8NBV4 271 aa12.52□□□□□ -0.41
CIITA-213ENST00000618327 ZNF721Q8TF20 911 aa12.52□□□□□ -0.41
CIITA-213ENST00000618327 ST6GALNAC5Q9BVH7 336 aa12.52□□□□□ -0.41
CIITA-213ENST00000618327 LOC107986453A0A1B0GWG9 222 aa12.52□□□□□ -0.41
CIITA-213ENST00000618327 B4E171 279 aa12.52□□□□□ -0.41
CIITA-213ENST00000618327 AKAIN1P0CW23 69 aa12.52□□□□□ -0.41
CIITA-213ENST00000618327 TPT1P13693 172 aaKnown RBP12.52□□□□□ -0.41
CIITA-213ENST00000618327 TSPAN7P41732 249 aa12.52□□□□□ -0.41
CIITA-213ENST00000618327 FOXL2P58012 376 aa12.52□□□□□ -0.41
CIITA-213ENST00000618327 FABP5Q01469 135 aa12.52□□□□□ -0.41
CIITA-213ENST00000618327 ISXQ2M1V0 245 aa12.52□□□□□ -0.41
CIITA-213ENST00000618327 LINC00299Q6ZSB3 139 aa12.52□□□□□ -0.41
CIITA-213ENST00000618327 PGAP1Q75T13 922 aa12.52□□□□□ -0.41
CIITA-213ENST00000618327 TEX19Q8NA77 164 aa12.52□□□□□ -0.41
CIITA-213ENST00000618327 OR1J2Q8NGS2 313 aa12.52□□□□□ -0.41
CIITA-213ENST00000618327 ROBO4Q8WZ75 1007 aa12.52□□□□□ -0.41
CIITA-213ENST00000618327 LIN7BQ9HAP6 207 aa12.52□□□□□ -0.41
CIITA-213ENST00000618327 FBXO8Q9NRD0 319 aa12.52□□□□□ -0.41
CIITA-213ENST00000618327 FAM86C1Q9NVL1 165 aa12.52□□□□□ -0.41
CIITA-213ENST00000618327 SLC5A6Q9Y289 635 aa12.52□□□□□ -0.41
CIITA-213ENST00000618327 CHST2Q9Y4C5 530 aa12.52□□□□□ -0.41
CIITA-213ENST00000618327 PLSCR5A0PG75 271 aa12.52□□□□□ -0.41
CIITA-213ENST00000618327 OR6C65A6NJZ3 312 aa12.52□□□□□ -0.41
CIITA-213ENST00000618327 MKRN2OSH3BPM6 223 aa12.52□□□□□ -0.41
CIITA-213ENST00000618327 HPP00738 406 aa12.52□□□□□ -0.41
CIITA-213ENST00000618327 TGFBR1P36897 503 aa12.52□□□□□ -0.41
CIITA-213ENST00000618327 CASP3P42574 277 aa12.52□□□□□ -0.41
CIITA-213ENST00000618327 BATFQ16520 125 aa12.52□□□□□ -0.41
CIITA-213ENST00000618327 GLYATL3Q5SZD4 288 aa12.52□□□□□ -0.41
CIITA-213ENST00000618327 OR5D18Q8NGL1 313 aa12.52□□□□□ -0.41
CIITA-213ENST00000618327 OR52N5Q8NH56 324 aa12.52□□□□□ -0.41
CIITA-213ENST00000618327 MOGAT1Q96PD6 335 aa12.52□□□□□ -0.41
CIITA-213ENST00000618327 SNX18Q96RF0 628 aa12.52□□□□□ -0.41
CIITA-213ENST00000618327 ZNF223Q9UK11 482 aaPredicted RBP12.52□□□□□ -0.41
CIITA-213ENST00000618327 SPTA1P02549 2419 aa12.52□□□□□ -0.41
CIITA-213ENST00000618327 LINC01387J3KSC0 135 aa12.51□□□□□ -0.41
CIITA-213ENST00000618327 KNG1P01042 644 aa12.51□□□□□ -0.41
CIITA-213ENST00000618327 RAF1P04049 648 aa12.51□□□□□ -0.41
CIITA-213ENST00000618327 ZNF93P35789 620 aaPredicted RBP12.51□□□□□ -0.41
CIITA-213ENST00000618327 NKAIN3Q8N8D7 197 aa12.51□□□□□ -0.41
CIITA-213ENST00000618327 OR51D1Q8NGF3 324 aa12.51□□□□□ -0.41
CIITA-213ENST00000618327 OR2M2Q96R28 347 aa12.51□□□□□ -0.41
CIITA-213ENST00000618327 METTL9Q9H1A3 318 aa12.51□□□□□ -0.41
CIITA-213ENST00000618327 ZFP64Q9NPA5 681 aa12.51□□□□□ -0.41
CIITA-213ENST00000618327 OBP2BQ9NPH6 170 aa12.51□□□□□ -0.41
CIITA-213ENST00000618327 REV1Q9UBZ9 1251 aa12.51□□□□□ -0.41
CIITA-213ENST00000618327 MRPS28Q9Y2Q9 187 aaKnown RBP12.51□□□□□ -0.41
CIITA-213ENST00000618327 NCOR1O75376 2440 aa12.51□□□□□ -0.41
CIITA-213ENST00000618327 TSTD3H0UI37 97 aa12.51□□□□□ -0.41
CIITA-213ENST00000618327 DHHO43323 396 aa12.51□□□□□ -0.41
CIITA-213ENST00000618327 HRGP04196 525 aa12.51□□□□□ -0.41
CIITA-213ENST00000618327 SLC17A1Q14916 467 aa12.51□□□□□ -0.41
CIITA-213ENST00000618327 XAF1Q6GPH4 301 aa12.51□□□□□ -0.41
CIITA-213ENST00000618327 DYNC2LI1Q8TCX1 351 aa12.51□□□□□ -0.41
CIITA-213ENST00000618327 VRK1Q99986 396 aaPredicted RBP12.51□□□□□ -0.41
CIITA-213ENST00000618327 MICU1Q9BPX6 476 aa12.51□□□□□ -0.41
CIITA-213ENST00000618327 TMEM59Q9BXS4 323 aa12.51□□□□□ -0.41
CIITA-213ENST00000618327 KCNIP1Q9NZI2 227 aa12.51□□□□□ -0.41
CIITA-213ENST00000618327 STEAP1Q9UHE8 339 aa12.51□□□□□ -0.41
CIITA-213ENST00000618327 SLCO1B1Q9Y6L6 691 aa12.51□□□□□ -0.41
CIITA-213ENST00000618327 CENPVL1A0A0U1RR11 272 aa12.51□□□□□ -0.41
CIITA-213ENST00000618327 HSPB2A8KAH6 182 aa12.51□□□□□ -0.41
CIITA-213ENST00000618327 UBL3O95164 117 aa12.51□□□□□ -0.41
CIITA-213ENST00000618327 NTN1O95631 604 aa12.51□□□□□ -0.41
CIITA-213ENST00000618327 GP1BAP07359 652 aa12.51□□□□□ -0.41
CIITA-213ENST00000618327 ANKRD34CP0C6C1 535 aa12.51□□□□□ -0.41
CIITA-213ENST00000618327 UBBP0CG47 229 aa12.51□□□□□ -0.41
CIITA-213ENST00000618327 SLC25A1P53007 311 aa12.51□□□□□ -0.41
CIITA-213ENST00000618327 RAP2BP61225 183 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms