RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 SELEP16581 610 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 FGF7P21781 194 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 EIF1P41567 113 aaKnown RBP5.5□□□□□ -1.53
RFX3-212ENST00000617270 CCR9P51686 369 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 SNRPNP63162 240 aaKnown RBP5.5□□□□□ -1.53
RFX3-212ENST00000617270 ERHP84090 104 aaKnown RBP5.5□□□□□ -1.53
RFX3-212ENST00000617270 PRDX4Q13162 271 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 OLIG1Q8TAK6 271 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 OPALINQ96PE5 141 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 GAREM1Q9H706 876 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 KLK4Q9Y5K2 254 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 RP1L1Q8IWN7 2480 aaPredicted RBP5.5□□□□□ -1.53
RFX3-212ENST00000617270 A0A096LPE4 126 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 A0A1W2PPZ6 126 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 ANKRD61A6NGH8 418 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 JTBO76095 146 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 TTRP02766 147 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 OR5AL1P0C617 328 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 BMP5P22003 454 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 MNX1P50219 401 aaPredicted RBP5.5□□□□□ -1.53
RFX3-212ENST00000617270 MISPQ8IVT2 679 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 BCL2L2Q92843 193 aaPredicted RBP5.5□□□□□ -1.53
RFX3-212ENST00000617270 LCORQ96JN0 433 aaPredicted RBP5.5□□□□□ -1.53
RFX3-212ENST00000617270 CMTM3Q96MX0 182 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 SPACA5Q96QH8 159 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 ACSS1Q9NUB1 689 aaPredicted RBP5.5□□□□□ -1.53
RFX3-212ENST00000617270 ANKRD12Q6UB98 2062 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 B4GALT3O60512 393 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 HTR1FP30939 366 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 ADRA1AP35348 466 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 OPRM1P35372 400 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 RBP2P50120 134 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.5□□□□□ -1.53
RFX3-212ENST00000617270 DOK3Q7L591 496 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 HSD17B13Q7Z5P4 300 aaPredicted RBP5.5□□□□□ -1.53
RFX3-212ENST00000617270 UBE3DQ7Z6J8 389 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 PRR14Q9BWN1 585 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 BCO1Q9HAY6 547 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 CTSFQ9UBX1 484 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 ADAM11O75078 769 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 RBP4P02753 201 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 TBXA2RP21731 343 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 RPL12P30050 165 aaKnown RBP5.5□□□□□ -1.53
RFX3-212ENST00000617270 ALKBH6Q3KRA9 238 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 ACSM6Q6P461 480 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 GRINAQ7Z429 371 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 GABRG1Q8N1C3 465 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 MSL2Q9HCI7 577 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 CLEC2DQ9UHP7 191 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 TRAPPC4Q9Y296 219 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 MRPS2Q9Y399 296 aaKnown RBP5.5□□□□□ -1.53
RFX3-212ENST00000617270 KIF1AQ12756 1690 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 TMEM200CA6NKL6 621 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 H3BVH4 76 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 NQO2P16083 231 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 CD1BP29016 333 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 COTL1Q14019 142 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 SLC17A1Q14916 467 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 SPRED3Q2MJR0 410 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 CD276Q5ZPR3 534 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 TMEM81Q6P7N7 255 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 MFSD4AQ8N468 514 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 NARFLQ9H6Q4 476 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 DLL4Q9NR61 685 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 SIRT3Q9NTG7 399 aaPredicted RBP5.5□□□□□ -1.53
RFX3-212ENST00000617270 PSENENQ9NZ42 101 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 PSORS1C1Q9UIG5 152 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 CORINQ9Y5Q5 1042 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 ZC3H12DA2A288 527 aaKnown RBP5.5□□□□□ -1.53
RFX3-212ENST00000617270 C5orf49A4QMS7 147 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 CYR61O00622 381 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 CTNSO60931 367 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 SOD1P00441 154 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 MMP7P09237 267 aaPredicted RBP5.5□□□□□ -1.53
RFX3-212ENST00000617270 AOAHP28039 575 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 CSNK1G2P78368 415 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 DGCR2P98153 550 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 C17orf67Q0P5P2 114 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 THEM4Q5T1C6 240 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 ASTLQ6HA08 431 aaPredicted RBP5.5□□□□□ -1.53
RFX3-212ENST00000617270 RPUSD3Q6P087 351 aaKnown RBP5.5□□□□□ -1.53
RFX3-212ENST00000617270 PLXDC2Q6UX71 529 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 CYS1Q717R9 158 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 TRILQ7L0X0 811 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 LRRTM3Q86VH5 581 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 OR5AP2Q8NGF4 316 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 SLC35A4Q96G79 324 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 PCYT2Q99447 389 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 MFRPQ9BY79 579 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 AP5S1Q9NUS5 200 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 GDE1Q9NZC3 331 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 TRAPPC1Q9Y5R8 145 aa5.5□□□□□ -1.53
RFX3-212ENST00000617270 ZNF716A6NP11 495 aa5.49□□□□□ -1.53
RFX3-212ENST00000617270 S100A8P05109 93 aa5.49□□□□□ -1.53
RFX3-212ENST00000617270 ALDOCP09972 364 aaKnown RBP5.49□□□□□ -1.53
RFX3-212ENST00000617270 AREGP15514 252 aa5.49□□□□□ -1.53
RFX3-212ENST00000617270 POLR2IP36954 125 aaKnown RBP5.49□□□□□ -1.53
RFX3-212ENST00000617270 PAX5Q02548 391 aa5.49□□□□□ -1.53
RFX3-212ENST00000617270 ZNF816Q0VGE8 651 aaPredicted RBP5.49□□□□□ -1.53
RFX3-212ENST00000617270 ZNF750Q32MQ0 723 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms