RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 SLC25A24Q6NUK1 477 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 ADGRE4PQ86SQ3 457 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 TDHQ8IZJ6 230 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 SLC22A24Q8N4F4 322 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 HGDQ93099 445 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 OR6C1Q96RD1 312 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 SCPEP1Q9HB40 452 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 C12orf4Q9NQ89 552 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 HPF1Q9NWY4 346 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 VWA8A3KMH1 1905 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 MTRF1O75570 445 aaKnown RBP5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 VAMP5O95183 116 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 GAAP10253 952 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 MSX1P28360 303 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 RAD52P43351 418 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 GAS1P54826 345 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 SLC36A2Q495M3 483 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 BEX5Q5H9J7 111 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 GABRG1Q8N1C3 465 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 SLC22A18ASQ8N1D0 253 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 DDIT4LQ96D03 193 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 HIST1H2AAQ96QV6 131 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 DUSP23Q9BVJ7 150 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 ALKBH4Q9NXW9 302 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 TCRBV16S1A1N1A0A5B0 115 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 LTBRP36941 435 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 GLP1RP43220 463 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 CSNK2A1P68400 391 aaPredicted RBP5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 EXOSC2Q13868 293 aaKnown RBP5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 AKIRIN2Q53H80 203 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 KCNIP4Q6PIL6 250 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 CSNK2A3Q8NEV1 391 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 OR5M1Q8NGP8 315 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 PNPLA2Q96AD5 504 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 PADI1Q9ULC6 663 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 MEMO1Q9Y316 297 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 RHBDD3Q9Y3P4 386 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 DOCK9Q9BZ29 2069 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 NSG1A0A0A6YYJ2 146 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 PYCARD-AS1I3L0S3 204 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 TPD52L2O43399 206 aaKnown RBP5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 XRCC3O43542 346 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 STK17BO94768 372 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 GLSO94925 669 aaPredicted RBP5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 NDUFB6O95139 128 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 CRYZL1O95825 349 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 JMJD7P0C870 316 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 NAGAP17050 411 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 EIF1P41567 113 aaKnown RBP5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 FHL5Q5TD97 284 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 PXKQ7Z7A4 578 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 SLC51BQ86UW2 128 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 KMT5CQ86Y97 462 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 GTPBP8Q8N3Z3 284 aaPredicted RBP5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 NKAIN3Q8N8D7 197 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 PTPMT1Q8WUK0 201 aaPredicted RBP5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 BORCS8Q96FH0 119 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 TRAF4Q9BUZ4 470 aaPredicted RBP5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 A0A0B4J293 547 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 SERPINA5P05154 406 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 GIPP09681 153 aaPredicted RBP5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 ADRA2CP18825 462 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 APOBEC1P41238 236 aaKnown RBP5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 MMP16P51512 607 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 GPR85P60893 370 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 S100A10P60903 97 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 EGR3Q06889 387 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 FGL1Q08830 312 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 SKP2Q13309 424 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 ST3GAL2Q16842 350 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 TRILQ7L0X0 811 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 OR51A4Q8NGJ6 313 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 SLAMF6Q96DU3 332 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 RAB3CQ96E17 227 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 TSNAXQ99598 290 aaKnown RBP5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 ZNF436Q9C0F3 470 aaPredicted RBP5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 WWTR1Q9GZV5 400 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 PCED1AQ9H1Q7 454 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 SLC39A1Q9NY26 324 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 LAMA3Q16787 3333 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 SNRPGP15A8MWD9 76 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 P04436 131 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 NGFRP08138 427 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 UBCP0CG48 685 aaKnown RBP5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 ZNF35P13682 527 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 FOXF1Q12946 379 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 CFAP77Q6ZQR2 320 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 ZNF687Q8N1G0 1237 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 ZNF321PQ8N8H1 164 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 ZNF615Q8N8J6 731 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 FAM71CQ8NEG0 241 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 RNF128Q8TEB7 428 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 CMTM3Q96MX0 182 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 AMELYQ99218 206 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 TAS2R4Q9NYW5 299 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 MEIKINA0A087WXM9 373 aa5.07□□□□□ -1.6
SYNCRIP-204ENST00000616122 C17orf51A8MQB3 221 aa5.07□□□□□ -1.6
SYNCRIP-204ENST00000616122 IFI6P09912 130 aa5.07□□□□□ -1.6
SYNCRIP-204ENST00000616122 GLI4P10075 376 aa5.07□□□□□ -1.6
SYNCRIP-204ENST00000616122 IL9P15248 144 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms