RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 GJA4P35212 333 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 RPP30P78346 268 aaKnown RBP11.88□□□□□ -0.51
MSH6-214ENST00000616033 ZNF77Q15935 545 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 LINC01590Q5TEZ4 76 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 TRAPPC6BQ86SZ2 158 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 ZNF383Q8NA42 475 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 OR5AP2Q8NGF4 316 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 OR9A4Q8NGU2 314 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 MARCH1Q8TCQ1 289 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 COX14Q96I36 57 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 THOC3Q96J01 351 aaKnown RBP11.88□□□□□ -0.51
MSH6-214ENST00000616033 KLHDC3Q9BQ90 382 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 LAT2Q9GZY6 243 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 EPHA6Q9UF33 1036 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 WASF3Q9UPY6 502 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 MRPS33Q9Y291 106 aaKnown RBP11.88□□□□□ -0.51
MSH6-214ENST00000616033 HOXB5P09067 269 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 MUC1P15941 1255 aaPredicted RBP11.88□□□□□ -0.51
MSH6-214ENST00000616033 RCC1P18754 421 aaPredicted RBP11.88□□□□□ -0.51
MSH6-214ENST00000616033 CD1CP29017 333 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 HRH1P35367 487 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 RORAP35398 523 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 F2RL1P55085 397 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 C1QL3Q5VWW1 255 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 PAPD4Q6PIY7 484 aaKnown RBP11.88□□□□□ -0.51
MSH6-214ENST00000616033 CBLN3Q6UW01 205 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 RCBTB1Q8NDN9 531 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 RSPRY1Q96DX4 576 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 PHB2Q99623 299 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 NAA11Q9BSU3 229 aaPredicted RBP11.88□□□□□ -0.51
MSH6-214ENST00000616033 FGF22Q9HCT0 170 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 ACKR4Q9NPB9 350 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 ICAM5Q9UMF0 924 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 CHD9Q3L8U1 2897 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 LOC100289279A0A1B0GTE1 492 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 MPZL1O95297 269 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 PNPP00491 289 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 CISD3P0C7P0 127 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 TPT1P13693 172 aaKnown RBP11.88□□□□□ -0.51
MSH6-214ENST00000616033 HTR2CP28335 458 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 NPY4RP50391 375 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 SSTP61278 116 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 DPY19L2P2Q6ZN68 376 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 COMMD2Q86X83 199 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 BAP18Q8IXM2 172 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 C15orf40Q8WUR7 153 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 MAFIPQ8WZ33 124 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 RHOFQ9HBH0 211 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 CKLFQ9UBR5 152 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 SERTAD3Q9UJW9 196 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 KLK13Q9UKR3 277 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 MRPS18BQ9Y676 258 aaKnown RBP11.88□□□□□ -0.51
MSH6-214ENST00000616033 COL4A6Q14031 1691 aa11.87□□□□□ -0.51
MSH6-214ENST00000616033 A0A1W2PPC1 479 aa11.87□□□□□ -0.51
MSH6-214ENST00000616033 A6NLC8 198 aa11.87□□□□□ -0.51
MSH6-214ENST00000616033 H0YGG7 62 aa11.87□□□□□ -0.51
MSH6-214ENST00000616033 CLN5O75503 358 aa11.87□□□□□ -0.51
MSH6-214ENST00000616033 STK17BO94768 372 aa11.87□□□□□ -0.51
MSH6-214ENST00000616033 ARG1P05089 322 aa11.87□□□□□ -0.51
MSH6-214ENST00000616033 SFTA3P0C7M3 94 aa11.87□□□□□ -0.51
MSH6-214ENST00000616033 GNB3P16520 340 aa11.87□□□□□ -0.51
MSH6-214ENST00000616033 P2RY4P51582 365 aa11.87□□□□□ -0.51
MSH6-214ENST00000616033 RAB2AP61019 212 aa11.87□□□□□ -0.51
MSH6-214ENST00000616033 ARF3P61204 181 aaPredicted RBP11.87□□□□□ -0.51
MSH6-214ENST00000616033 GPR18Q14330 331 aa11.87□□□□□ -0.51
MSH6-214ENST00000616033 LINC00346Q8IVM7 164 aa11.87□□□□□ -0.51
MSH6-214ENST00000616033 TMIEQ8NEW7 156 aa11.87□□□□□ -0.51
MSH6-214ENST00000616033 OR13C8Q8NGS7 320 aa11.87□□□□□ -0.51
MSH6-214ENST00000616033 SLAMF9Q96A28 289 aa11.87□□□□□ -0.51
MSH6-214ENST00000616033 ZDHHC12Q96GR4 267 aa11.87□□□□□ -0.51
MSH6-214ENST00000616033 LRP3O75074 770 aa11.87□□□□□ -0.51
MSH6-214ENST00000616033 ADH1CP00326 375 aa11.87□□□□□ -0.51
MSH6-214ENST00000616033 CD96P40200 585 aa11.87□□□□□ -0.51
MSH6-214ENST00000616033 KIR3DL2P43630 455 aa11.87□□□□□ -0.51
MSH6-214ENST00000616033 RIDAP52758 137 aaKnown RBP11.87□□□□□ -0.51
MSH6-214ENST00000616033 PPP1CAP62136 330 aa11.87□□□□□ -0.51
MSH6-214ENST00000616033 PMPCAQ10713 525 aa11.87□□□□□ -0.51
MSH6-214ENST00000616033 ALG11Q2TAA5 492 aa11.87□□□□□ -0.51
MSH6-214ENST00000616033 C2orf27AQ580R0 203 aa11.87□□□□□ -0.51
MSH6-214ENST00000616033 SLC16A9Q7RTY1 509 aa11.87□□□□□ -0.51
MSH6-214ENST00000616033 FJX1Q86VR8 437 aa11.87□□□□□ -0.51
MSH6-214ENST00000616033 RRNAD1Q96FB5 475 aaKnown RBP11.87□□□□□ -0.51
MSH6-214ENST00000616033 A0A1W2PQU0 124 aa11.86□□□□□ -0.51
MSH6-214ENST00000616033 SLC16A7O60669 478 aa11.86□□□□□ -0.51
MSH6-214ENST00000616033 GPR75O95800 540 aa11.86□□□□□ -0.51
MSH6-214ENST00000616033 SCGB1D2O95969 90 aa11.86□□□□□ -0.51
MSH6-214ENST00000616033 TIMP1P01033 207 aa11.86□□□□□ -0.51
MSH6-214ENST00000616033 ITGB2P05107 769 aa11.86□□□□□ -0.51
MSH6-214ENST00000616033 GLI4P10075 376 aa11.86□□□□□ -0.51
MSH6-214ENST00000616033 PSG6Q00889 435 aa11.86□□□□□ -0.51
MSH6-214ENST00000616033 ELOCQ15369 112 aa11.86□□□□□ -0.51
MSH6-214ENST00000616033 FIGLAQ6QHK4 219 aa11.86□□□□□ -0.51
MSH6-214ENST00000616033 BEND4Q6ZU67 534 aa11.86□□□□□ -0.51
MSH6-214ENST00000616033 AVL9Q8NBF6 648 aa11.86□□□□□ -0.51
MSH6-214ENST00000616033 SECTM1Q8WVN6 248 aa11.86□□□□□ -0.51
MSH6-214ENST00000616033 INTS14Q96SY0 518 aa11.86□□□□□ -0.51
MSH6-214ENST00000616033 DUSP22Q9NRW4 184 aa11.86□□□□□ -0.51
MSH6-214ENST00000616033 RHPN2P1A8MT19 583 aa11.86□□□□□ -0.51
MSH6-214ENST00000616033 HCRTR1O43613 425 aa11.86□□□□□ -0.51
MSH6-214ENST00000616033 GATCO43716 136 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms