RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 IFNA2P01563 188 aa11.78□□□□□ -0.52
FOXN3-219ENST00000615335 CD2P06729 351 aa11.78□□□□□ -0.52
FOXN3-219ENST00000615335 EFNA3P52797 238 aa11.78□□□□□ -0.52
FOXN3-219ENST00000615335 GABREP78334 506 aa11.78□□□□□ -0.52
FOXN3-219ENST00000615335 DUSP8Q13202 625 aa11.78□□□□□ -0.52
FOXN3-219ENST00000615335 BIKQ13323 160 aa11.78□□□□□ -0.52
FOXN3-219ENST00000615335 TOMM20Q15388 145 aa11.78□□□□□ -0.52
FOXN3-219ENST00000615335 MRPL14Q6P1L8 145 aaKnown RBP11.78□□□□□ -0.52
FOXN3-219ENST00000615335 DGAT2L6Q6ZPD8 337 aa11.78□□□□□ -0.52
FOXN3-219ENST00000615335 TMPRSS11FQ6ZWK6 438 aa11.78□□□□□ -0.52
FOXN3-219ENST00000615335 OR2L13Q8N349 312 aa11.78□□□□□ -0.52
FOXN3-219ENST00000615335 SNX33Q8WV41 574 aa11.78□□□□□ -0.52
FOXN3-219ENST00000615335 SDF2Q99470 211 aa11.78□□□□□ -0.52
FOXN3-219ENST00000615335 PRSS27Q9BQR3 290 aa11.78□□□□□ -0.52
FOXN3-219ENST00000615335 SLC26A1Q9H2B4 701 aa11.78□□□□□ -0.52
FOXN3-219ENST00000615335 ABRACLQ9P1F3 81 aa11.78□□□□□ -0.52
FOXN3-219ENST00000615335 ASPMQ8IZT6 3477 aa11.78□□□□□ -0.52
FOXN3-219ENST00000615335 CENPVL1A0A0U1RR11 272 aa11.77□□□□□ -0.52
FOXN3-219ENST00000615335 BTBD17A6NE02 478 aa11.77□□□□□ -0.52
FOXN3-219ENST00000615335 THBS1P07996 1170 aa11.77□□□□□ -0.52
FOXN3-219ENST00000615335 BMP7P18075 431 aa11.77□□□□□ -0.52
FOXN3-219ENST00000615335 FUT1P19526 365 aa11.77□□□□□ -0.52
FOXN3-219ENST00000615335 FOXO1Q12778 655 aa11.77□□□□□ -0.52
FOXN3-219ENST00000615335 ZNF345Q14585 488 aa11.77□□□□□ -0.52
FOXN3-219ENST00000615335 OLFML2AQ68BL7 652 aa11.77□□□□□ -0.52
FOXN3-219ENST00000615335 TMPRSS7Q7RTY8 843 aa11.77□□□□□ -0.52
FOXN3-219ENST00000615335 TIPARPQ7Z3E1 657 aaKnown RBP11.77□□□□□ -0.52
FOXN3-219ENST00000615335 TMEM200AQ86VY9 491 aa11.77□□□□□ -0.52
FOXN3-219ENST00000615335 ZNF383Q8NA42 475 aa11.77□□□□□ -0.52
FOXN3-219ENST00000615335 THAP4Q8WY91 577 aa11.77□□□□□ -0.52
FOXN3-219ENST00000615335 HIST1H2BAQ96A08 127 aa11.77□□□□□ -0.52
FOXN3-219ENST00000615335 RHOVQ96L33 236 aa11.77□□□□□ -0.52
FOXN3-219ENST00000615335 METTL9Q9H1A3 318 aa11.77□□□□□ -0.52
FOXN3-219ENST00000615335 TRIM36Q9NQ86 728 aa11.77□□□□□ -0.52
FOXN3-219ENST00000615335 ASF1BQ9NVP2 202 aa11.77□□□□□ -0.52
FOXN3-219ENST00000615335 ZNF223Q9UK11 482 aaPredicted RBP11.77□□□□□ -0.52
FOXN3-219ENST00000615335 NPFFR2Q9Y5X5 522 aa11.77□□□□□ -0.52
FOXN3-219ENST00000615335 IGKV3D-11A0A0A0MRZ8 115 aa11.77□□□□□ -0.53
FOXN3-219ENST00000615335 VSTM2BA6NLU5 285 aa11.77□□□□□ -0.53
FOXN3-219ENST00000615335 CT62P0C5K7 136 aa11.77□□□□□ -0.53
FOXN3-219ENST00000615335 MAKP20794 623 aa11.77□□□□□ -0.53
FOXN3-219ENST00000615335 ACHEP22303 614 aa11.77□□□□□ -0.53
FOXN3-219ENST00000615335 TRAM1Q15629 374 aa11.77□□□□□ -0.53
FOXN3-219ENST00000615335 RAB12Q6IQ22 244 aa11.77□□□□□ -0.53
FOXN3-219ENST00000615335 ZNF813Q6ZN06 617 aa11.77□□□□□ -0.53
FOXN3-219ENST00000615335 KCNRGQ8N5I3 272 aa11.77□□□□□ -0.53
FOXN3-219ENST00000615335 PLPP5Q8NEB5 264 aa11.77□□□□□ -0.53
FOXN3-219ENST00000615335 OR10H4Q8NGA5 316 aa11.77□□□□□ -0.53
FOXN3-219ENST00000615335 OR5W2Q8NH69 310 aa11.77□□□□□ -0.53
FOXN3-219ENST00000615335 OR6X1Q8NH79 312 aa11.77□□□□□ -0.53
FOXN3-219ENST00000615335 PFN4Q8NHR9 129 aa11.77□□□□□ -0.53
FOXN3-219ENST00000615335 TMEM239Q8WW34 195 aa11.77□□□□□ -0.53
FOXN3-219ENST00000615335 METTL21AQ8WXB1 218 aa11.77□□□□□ -0.53
FOXN3-219ENST00000615335 CMTM3Q96MX0 182 aa11.77□□□□□ -0.53
FOXN3-219ENST00000615335 ZNF559Q9BR84 538 aa11.77□□□□□ -0.53
FOXN3-219ENST00000615335 TSPAN10Q9H1Z9 355 aaPredicted RBP11.77□□□□□ -0.53
FOXN3-219ENST00000615335 RCE1Q9Y256 329 aa11.77□□□□□ -0.53
FOXN3-219ENST00000615335 C17orf105B2RV13 164 aa11.76□□□□□ -0.53
FOXN3-219ENST00000615335 BHLHE40O14503 412 aa11.76□□□□□ -0.53
FOXN3-219ENST00000615335 BCL2L11O43521 198 aa11.76□□□□□ -0.53
FOXN3-219ENST00000615335 OR2F2O95006 317 aa11.76□□□□□ -0.53
FOXN3-219ENST00000615335 SBK2P0C263 348 aa11.76□□□□□ -0.53
FOXN3-219ENST00000615335 APEHP13798 732 aaKnown RBP11.76□□□□□ -0.53
FOXN3-219ENST00000615335 CD53P19397 219 aa11.76□□□□□ -0.53
FOXN3-219ENST00000615335 SDHBP21912 280 aa11.76□□□□□ -0.53
FOXN3-219ENST00000615335 SHC1P29353 583 aa11.76□□□□□ -0.53
FOXN3-219ENST00000615335 DDTP30046 118 aa11.76□□□□□ -0.53
FOXN3-219ENST00000615335 EMP2P54851 167 aa11.76□□□□□ -0.53
FOXN3-219ENST00000615335 FXYD6P3P58550 94 aa11.76□□□□□ -0.53
FOXN3-219ENST00000615335 PKIAP61925 76 aa11.76□□□□□ -0.53
FOXN3-219ENST00000615335 OR2F1Q13607 317 aa11.76□□□□□ -0.53
FOXN3-219ENST00000615335 OR1Q1Q15612 314 aa11.76□□□□□ -0.53
FOXN3-219ENST00000615335 FAM69BQ5VUD6 431 aa11.76□□□□□ -0.53
FOXN3-219ENST00000615335 ARL9Q6T311 187 aa11.76□□□□□ -0.53
FOXN3-219ENST00000615335 WDR88Q6ZMY6 472 aa11.76□□□□□ -0.53
FOXN3-219ENST00000615335 LANCL3Q6ZV70 420 aa11.76□□□□□ -0.53
FOXN3-219ENST00000615335 LSRQ86X29 649 aaPredicted RBP11.76□□□□□ -0.53
FOXN3-219ENST00000615335 ZNF619Q8N2I2 560 aa11.76□□□□□ -0.53
FOXN3-219ENST00000615335 KDF1Q8NAX2 398 aaPredicted RBP11.76□□□□□ -0.53
FOXN3-219ENST00000615335 SLC25A28Q96A46 364 aa11.76□□□□□ -0.53
FOXN3-219ENST00000615335 SLC46A1Q96NT5 459 aa11.76□□□□□ -0.53
FOXN3-219ENST00000615335 TIMP4Q99727 224 aa11.76□□□□□ -0.53
FOXN3-219ENST00000615335 HCAR1Q9BXC0 346 aa11.76□□□□□ -0.53
FOXN3-219ENST00000615335 SPRY4Q9C004 299 aa11.76□□□□□ -0.53
FOXN3-219ENST00000615335 WDR54Q9H977 334 aa11.76□□□□□ -0.53
FOXN3-219ENST00000615335 NXT1Q9UKK6 140 aaKnown RBP11.76□□□□□ -0.53
FOXN3-219ENST00000615335 CELSR3Q9NYQ7 3312 aa11.76□□□□□ -0.53
FOXN3-219ENST00000615335 PIEZO1Q92508 2521 aa11.76□□□□□ -0.53
FOXN3-219ENST00000615335 TSTD3H0UI37 97 aa11.76□□□□□ -0.53
FOXN3-219ENST00000615335 OR2T1O43869 369 aa11.76□□□□□ -0.53
FOXN3-219ENST00000615335 BRINP1O60477 761 aa11.76□□□□□ -0.53
FOXN3-219ENST00000615335 RCBTB2O95199 551 aa11.76□□□□□ -0.53
FOXN3-219ENST00000615335 MBP02144 154 aa11.76□□□□□ -0.53
FOXN3-219ENST00000615335 MT-ND5P03915 603 aa11.76□□□□□ -0.53
FOXN3-219ENST00000615335 DBIP07108 87 aaKnown RBP11.76□□□□□ -0.53
FOXN3-219ENST00000615335 NQO2P16083 231 aa11.76□□□□□ -0.53
FOXN3-219ENST00000615335 TCN2P20062 427 aa11.76□□□□□ -0.53
FOXN3-219ENST00000615335 H2BFSP57053 126 aa11.76□□□□□ -0.53
FOXN3-219ENST00000615335 MGAT2Q10469 447 aa11.76□□□□□ -0.53
FOXN3-219ENST00000615335 POU4F2Q12837 409 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms