RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 NPY4RP50391 375 aa18.35■□□□□ 0.53
CTDP1-208ENST00000613122 METAP1P53582 386 aa18.35■□□□□ 0.53
CTDP1-208ENST00000613122 TRIP6Q15654 476 aaKnown RBP18.35■□□□□ 0.53
CTDP1-208ENST00000613122 KCNIP4Q6PIL6 250 aa18.35■□□□□ 0.53
CTDP1-208ENST00000613122 LACC1Q8IV20 430 aa18.35■□□□□ 0.53
CTDP1-208ENST00000613122 OR52H1Q8NGJ2 320 aa18.35■□□□□ 0.53
CTDP1-208ENST00000613122 ZCCHC4Q9H5U6 513 aa18.35■□□□□ 0.53
CTDP1-208ENST00000613122 BCL2L10Q9HD36 194 aa18.35■□□□□ 0.53
CTDP1-208ENST00000613122 HPSE2Q8WWQ2 592 aa18.34■□□□□ 0.53
CTDP1-208ENST00000613122 PLA2G3Q9NZ20 509 aa18.34■□□□□ 0.53
CTDP1-208ENST00000613122 A0A0B4J2A0 478 aa18.34■□□□□ 0.53
CTDP1-208ENST00000613122 LGALS8O00214 317 aa18.34■□□□□ 0.53
CTDP1-208ENST00000613122 SSTR2P30874 369 aa18.34■□□□□ 0.53
CTDP1-208ENST00000613122 SUCNR1Q9BXA5 334 aa18.34■□□□□ 0.53
CTDP1-208ENST00000613122 SHPKQ9UHJ6 478 aa18.34■□□□□ 0.53
CTDP1-208ENST00000613122 SULT1B1O43704 296 aa18.34■□□□□ 0.53
CTDP1-208ENST00000613122 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.34■□□□□ 0.53
CTDP1-208ENST00000613122 RGS7BPQ6MZT1 257 aaPredicted RBP18.34■□□□□ 0.53
CTDP1-208ENST00000613122 CMTM2Q8TAZ6 248 aa18.34■□□□□ 0.53
CTDP1-208ENST00000613122 FAM212BQ9NTI7 297 aaPredicted RBP18.34■□□□□ 0.53
CTDP1-208ENST00000613122 LINC01387J3KSC0 135 aa18.34■□□□□ 0.53
CTDP1-208ENST00000613122 ATP1B1P05026 303 aa18.34■□□□□ 0.53
CTDP1-208ENST00000613122 CHRNB1P11230 501 aa18.34■□□□□ 0.53
CTDP1-208ENST00000613122 C3orf49Q96BT1 292 aa18.34■□□□□ 0.53
CTDP1-208ENST00000613122 TNRC6CQ9HCJ0 1690 aaKnown RBP18.34■□□□□ 0.53
CTDP1-208ENST00000613122 M0R296 226 aa18.34■□□□□ 0.53
CTDP1-208ENST00000613122 HCCSP53701 268 aa18.34■□□□□ 0.53
CTDP1-208ENST00000613122 C1orf53Q5VUE5 145 aa18.34■□□□□ 0.53
CTDP1-208ENST00000613122 TMEM99Q8N816 258 aa18.34■□□□□ 0.53
CTDP1-208ENST00000613122 ITPKCQ96DU7 683 aa18.34■□□□□ 0.53
CTDP1-208ENST00000613122 P4HTMQ9NXG6 502 aa18.34■□□□□ 0.53
CTDP1-208ENST00000613122 SRP9P49458 86 aaKnown RBP18.33■□□□□ 0.53
CTDP1-208ENST00000613122 PRAMEF5Q5TYX0 476 aa18.33■□□□□ 0.53
CTDP1-208ENST00000613122 PRAMEF6Q5VXH4 476 aa18.33■□□□□ 0.53
CTDP1-208ENST00000613122 NAA40Q86UY6 237 aa18.33■□□□□ 0.53
CTDP1-208ENST00000613122 NANOGP1Q8N7R0 232 aa18.33■□□□□ 0.53
CTDP1-208ENST00000613122 OR10K1Q8NGX5 313 aa18.33■□□□□ 0.53
CTDP1-208ENST00000613122 LIN37Q96GY3 246 aaPredicted RBP18.33■□□□□ 0.53
CTDP1-208ENST00000613122 ZNF486Q96H40 463 aaPredicted RBP18.33■□□□□ 0.53
CTDP1-208ENST00000613122 OR2A14Q96R47 310 aa18.33■□□□□ 0.53
CTDP1-208ENST00000613122 ISYNA1Q9NPH2 558 aa18.33■□□□□ 0.53
CTDP1-208ENST00000613122 FABP6P51161 128 aa18.33■□□□□ 0.53
CTDP1-208ENST00000613122 IAH1Q2TAA2 248 aaPredicted RBP18.33■□□□□ 0.53
CTDP1-208ENST00000613122 OR1S2Q8NGQ3 325 aa18.33■□□□□ 0.53
CTDP1-208ENST00000613122 OR52N5Q8NH56 324 aa18.33■□□□□ 0.53
CTDP1-208ENST00000613122 KCNG2Q9UJ96 466 aa18.33■□□□□ 0.53
CTDP1-208ENST00000613122 MEIKINA0A087WXM9 373 aa18.33■□□□□ 0.52
CTDP1-208ENST00000613122 IGHV1OR15-9A0A0B4J2B8 117 aa18.33■□□□□ 0.52
CTDP1-208ENST00000613122 F6UZH7 168 aa18.33■□□□□ 0.52
CTDP1-208ENST00000613122 HBE1P02100 147 aa18.33■□□□□ 0.52
CTDP1-208ENST00000613122 B4GALT1P15291 398 aa18.33■□□□□ 0.52
CTDP1-208ENST00000613122 DIO1P49895 249 aa18.33■□□□□ 0.52
CTDP1-208ENST00000613122 OR51H1Q8NH63 302 aa18.33■□□□□ 0.52
CTDP1-208ENST00000613122 OR2AE1Q8NHA4 323 aa18.33■□□□□ 0.52
CTDP1-208ENST00000613122 GPR84Q9NQS5 396 aa18.33■□□□□ 0.52
CTDP1-208ENST00000613122 ADH4P08319 380 aa18.33■□□□□ 0.52
CTDP1-208ENST00000613122 EBPQ15125 230 aaKnown RBP18.33■□□□□ 0.52
CTDP1-208ENST00000613122 SIAH3Q8IW03 269 aa18.33■□□□□ 0.52
CTDP1-208ENST00000613122 TMEM217Q8N7C4 229 aa18.33■□□□□ 0.52
CTDP1-208ENST00000613122 DTWD2Q8NBA8 298 aa18.33■□□□□ 0.52
CTDP1-208ENST00000613122 PLPP5Q8NEB5 264 aa18.33■□□□□ 0.52
CTDP1-208ENST00000613122 ARSGQ96EG1 525 aa18.33■□□□□ 0.52
CTDP1-208ENST00000613122 SERGEFQ9UGK8 458 aa18.33■□□□□ 0.52
CTDP1-208ENST00000613122 BHLHE40O14503 412 aa18.33■□□□□ 0.52
CTDP1-208ENST00000613122 ETHE1O95571 254 aa18.33■□□□□ 0.52
CTDP1-208ENST00000613122 ARRB2P32121 409 aa18.33■□□□□ 0.52
CTDP1-208ENST00000613122 GPR12P47775 334 aa18.33■□□□□ 0.52
CTDP1-208ENST00000613122 ZNF626Q68DY1 528 aa18.33■□□□□ 0.52
CTDP1-208ENST00000613122 ZDHHC23Q8IYP9 409 aa18.33■□□□□ 0.52
CTDP1-208ENST00000613122 LAMB1P07942 1786 aa18.32■□□□□ 0.52
CTDP1-208ENST00000613122 ANKRD12Q6UB98 2062 aa18.32■□□□□ 0.52
CTDP1-208ENST00000613122 HABP2Q14520 560 aaPredicted RBP18.32■□□□□ 0.52
CTDP1-208ENST00000613122 A0A0A6YYD5 115 aa18.32■□□□□ 0.52
CTDP1-208ENST00000613122 TMEM129A0AVI4 362 aa18.32■□□□□ 0.52
CTDP1-208ENST00000613122 CRYM-AS1A6NIL9 109 aa18.32■□□□□ 0.52
CTDP1-208ENST00000613122 SLC2A10O95528 541 aa18.32■□□□□ 0.52
CTDP1-208ENST00000613122 RAF1P04049 648 aa18.32■□□□□ 0.52
CTDP1-208ENST00000613122 CLINT1Q14677 625 aa18.32■□□□□ 0.52
CTDP1-208ENST00000613122 FAM199XQ6PEV8 388 aaPredicted RBP18.32■□□□□ 0.52
CTDP1-208ENST00000613122 TMPRSS7Q7RTY8 843 aa18.32■□□□□ 0.52
CTDP1-208ENST00000613122 FCRL1Q96LA6 429 aa18.32■□□□□ 0.52
CTDP1-208ENST00000613122 ARPC5LQ9BPX5 153 aa18.32■□□□□ 0.52
CTDP1-208ENST00000613122 FBXL2Q9UKC9 423 aa18.32■□□□□ 0.52
CTDP1-208ENST00000613122 ANKRD61A6NGH8 418 aa18.32■□□□□ 0.52
CTDP1-208ENST00000613122 DHHO43323 396 aa18.32■□□□□ 0.52
CTDP1-208ENST00000613122 TFF2Q03403 129 aa18.32■□□□□ 0.52
CTDP1-208ENST00000613122 EGR3Q06889 387 aa18.32■□□□□ 0.52
CTDP1-208ENST00000613122 RTL8BQ17RB0 113 aa18.32■□□□□ 0.52
CTDP1-208ENST00000613122 SUMF1Q8NBK3 374 aa18.32■□□□□ 0.52
CTDP1-208ENST00000613122 OPA3Q9H6K4 179 aa18.32■□□□□ 0.52
CTDP1-208ENST00000613122 HINT3Q9NQE9 182 aaKnown RBP18.32■□□□□ 0.52
CTDP1-208ENST00000613122 TSPAN12O95859 305 aa18.32■□□□□ 0.52
CTDP1-208ENST00000613122 CALCBP10092 127 aa18.32■□□□□ 0.52
CTDP1-208ENST00000613122 EPHA8P29322 1005 aaPredicted RBP18.32■□□□□ 0.52
CTDP1-208ENST00000613122 ZDHHC16Q969W1 377 aa18.32■□□□□ 0.52
CTDP1-208ENST00000613122 K7EQM0 130 aa18.31■□□□□ 0.52
CTDP1-208ENST00000613122 CLEC2LP0C7M8 214 aa18.31■□□□□ 0.52
CTDP1-208ENST00000613122 PCSK6P29122 969 aa18.31■□□□□ 0.52
CTDP1-208ENST00000613122 B4GALNT1Q00973 533 aa18.31■□□□□ 0.52
CTDP1-208ENST00000613122 POU4F3Q15319 338 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms