RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 CTSAP10619 480 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 ARRDC2Q8TBH0 407 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 GPR152Q8TDT2 470 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 LPPQ93052 612 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 NECTIN4Q96NY8 510 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 FAM198AQ9UFP1 575 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 ENTPD2Q9Y5L3 495 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 A0A1W2PPH5 198 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 MFSD2BA6NFX1 497 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 WDR1O75083 606 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 MDH2P40926 338 aaKnown RBP8.06□□□□□ -1.12
TTC28-208ENST00000612946 GSK3AP49840 483 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 SP2Q02086 613 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 OR5B2Q96R09 309 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 TP53RKQ96S44 253 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 PARD6GQ9BYG4 376 aaPredicted RBP8.06□□□□□ -1.12
TTC28-208ENST00000612946 MARCH4Q9P2E8 410 aaPredicted RBP8.06□□□□□ -1.12
TTC28-208ENST00000612946 KCNJ10P78508 379 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 ELAVL3Q14576 367 aaKnown RBP8.06□□□□□ -1.12
TTC28-208ENST00000612946 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.06□□□□□ -1.12
TTC28-208ENST00000612946 ZNF684Q5T5D7 378 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 ISG20Q96AZ6 181 aaKnown RBP8.06□□□□□ -1.12
TTC28-208ENST00000612946 RAB40CQ96S21 281 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 AMTP48728 403 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 PRAMEF19Q5SWL8 479 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 NUDT22Q9BRQ3 303 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 CLCF1Q9UBD9 225 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 IL20RAQ9UHF4 553 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 MYO7BQ6PIF6 2116 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 NWD2Q9ULI1 1742 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 SLC17A3O00476 420 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 PQBP1O60828 265 aaKnown RBP8.05□□□□□ -1.12
TTC28-208ENST00000612946 CRYABP02511 175 aaKnown RBP8.05□□□□□ -1.12
TTC28-208ENST00000612946 ACAA1P09110 424 aaPredicted RBP8.05□□□□□ -1.12
TTC28-208ENST00000612946 FPR2P25090 351 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 RPS24P62847 133 aaKnown RBP8.05□□□□□ -1.12
TTC28-208ENST00000612946 GRM7Q14831 915 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 ABI3BPQ7Z7G0 1075 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 LRP11Q86VZ4 500 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 OR5AU1Q8NGC0 362 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 OR4N2Q8NGD1 307 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 MT-ND6P03923 174 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 CRYBA1P05813 215 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 CYC1P08574 325 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 DAOP14920 347 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 MSX1P28360 303 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 ACVRL1P37023 503 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 DLEU7Q6UYE1 221 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 RBMXL3Q8N7X1 1067 aaKnown RBP8.05□□□□□ -1.12
TTC28-208ENST00000612946 DTD2Q96FN9 168 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 SIAH2O43255 324 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 DUS4LO95620 317 aaKnown RBP8.05□□□□□ -1.12
TTC28-208ENST00000612946 MPGP29372 298 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 HOXA11P31270 313 aaPredicted RBP8.05□□□□□ -1.12
TTC28-208ENST00000612946 TESK1Q15569 626 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 SLC16A12Q6ZSM3 486 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 BPIFA4PQ86YQ2 179 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 CYB561A3Q8NBI2 242 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 WDR61Q9GZS3 305 aaKnown RBP8.05□□□□□ -1.12
TTC28-208ENST00000612946 TDRD15B5MCY1 1934 aaKnown RBP8.05□□□□□ -1.12
TTC28-208ENST00000612946 SSSCA1O60232 199 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 SPNP16150 400 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 PTGER4P35408 488 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 TRILQ7L0X0 811 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 TMEM123Q8N131 208 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 POLR2AP24928 1970 aaKnown RBP8.05□□□□□ -1.12
TTC28-208ENST00000612946 WNT10BO00744 389 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 TOX3O15405 576 aaPredicted RBP8.05□□□□□ -1.12
TTC28-208ENST00000612946 HAND1O96004 215 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 TNFSF4P23510 183 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 CD200P41217 278 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 MRPL21Q7Z2W9 205 aaKnown RBP8.05□□□□□ -1.12
TTC28-208ENST00000612946 SAMD7Q7Z3H4 446 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 RBM23Q86U06 439 aaKnown RBP8.05□□□□□ -1.12
TTC28-208ENST00000612946 OR4S1Q8NGB4 309 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 HINT2Q9BX68 163 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 CCNOP22674 350 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 CNN1P51911 297 aaKnown RBP8.05□□□□□ -1.12
TTC28-208ENST00000612946 RPS21P63220 83 aaKnown RBP8.05□□□□□ -1.12
TTC28-208ENST00000612946 CRMP1Q14194 572 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 ZNF628Q5EBL2 1059 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 MANEAQ5SRI9 462 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 PLCXD3Q63HM9 321 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 VWA1Q6PCB0 445 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 SLC35E3Q7Z769 313 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 NDFIP1Q9BT67 221 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 IER2Q9BTL4 223 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 SLC46A2Q9BY10 475 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 LOC390937A0A1W2PQ73 354 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 MPPED1O15442 326 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 DBHP09172 617 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 BMI1P35226 326 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 PSMB10P40306 273 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 ZFP62Q8NB50 900 aaPredicted RBP8.05□□□□□ -1.12
TTC28-208ENST00000612946 STARD4Q96DR4 205 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 MRPL42Q9Y6G3 142 aaKnown RBP8.05□□□□□ -1.12
TTC28-208ENST00000612946 H3BSH0 61 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 PTP4A3O75365 173 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 HBQ1P09105 142 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 C8orf89P0DMQ9 161 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms