RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 TINAGL1Q9GZM7 467 aaPredicted RBP12.55□□□□□ -0.4
PCDHGA3-202ENST00000612467 ACTR6Q9GZN1 396 aa12.55□□□□□ -0.4
PCDHGA3-202ENST00000612467 NPDC1Q9NQX5 325 aaPredicted RBP12.55□□□□□ -0.4
PCDHGA3-202ENST00000612467 AKAP7Q9P0M2 348 aaPredicted RBP12.55□□□□□ -0.4
PCDHGA3-202ENST00000612467 SLC5A6Q9Y289 635 aa12.55□□□□□ -0.4
PCDHGA3-202ENST00000612467 GPR179Q6PRD1 2367 aa12.55□□□□□ -0.4
PCDHGA3-202ENST00000612467 NCOA6Q14686 2063 aaPredicted RBP12.55□□□□□ -0.4
PCDHGA3-202ENST00000612467 IGHV3-15A0A0B4J1V0 119 aa12.54□□□□□ -0.4
PCDHGA3-202ENST00000612467 C5orf63A6NC05 138 aa12.54□□□□□ -0.4
PCDHGA3-202ENST00000612467 TMEM235A6NFC5 223 aa12.54□□□□□ -0.4
PCDHGA3-202ENST00000612467 CCL4P13236 92 aa12.54□□□□□ -0.4
PCDHGA3-202ENST00000612467 GNALP38405 381 aa12.54□□□□□ -0.4
PCDHGA3-202ENST00000612467 ZNF41P51814 821 aaPredicted RBP12.54□□□□□ -0.4
PCDHGA3-202ENST00000612467 GFOD2Q3B7J2 385 aa12.54□□□□□ -0.4
PCDHGA3-202ENST00000612467 ELFN2Q5R3F8 820 aa12.54□□□□□ -0.4
PCDHGA3-202ENST00000612467 GALNT16Q8N428 558 aa12.54□□□□□ -0.4
PCDHGA3-202ENST00000612467 ADAT3Q96EY9 351 aaPredicted RBP12.54□□□□□ -0.4
PCDHGA3-202ENST00000612467 RASL10BQ96S79 203 aa12.54□□□□□ -0.4
PCDHGA3-202ENST00000612467 B3GNT4Q9C0J1 378 aa12.54□□□□□ -0.4
PCDHGA3-202ENST00000612467 SMOC1Q9H4F8 434 aa12.54□□□□□ -0.4
PCDHGA3-202ENST00000612467 GAREM1Q9H706 876 aa12.54□□□□□ -0.4
PCDHGA3-202ENST00000612467 DIABLOQ9NR28 239 aa12.54□□□□□ -0.4
PCDHGA3-202ENST00000612467 KLHL13Q9P2N7 655 aa12.54□□□□□ -0.4
PCDHGA3-202ENST00000612467 A0A1B0GUH1 482 aa12.54□□□□□ -0.4
PCDHGA3-202ENST00000612467 A0A1W2PQ72 361 aa12.54□□□□□ -0.4
PCDHGA3-202ENST00000612467 ACSM4P0C7M7 580 aa12.54□□□□□ -0.4
PCDHGA3-202ENST00000612467 IGFBP3P17936 291 aaPredicted RBP12.54□□□□□ -0.4
PCDHGA3-202ENST00000612467 APOBEC1P41238 236 aaKnown RBP12.54□□□□□ -0.4
PCDHGA3-202ENST00000612467 RAG2P55895 527 aa12.54□□□□□ -0.4
PCDHGA3-202ENST00000612467 PSMA6P60900 246 aaKnown RBP12.54□□□□□ -0.4
PCDHGA3-202ENST00000612467 DCAF12L2Q5VW00 463 aa12.54□□□□□ -0.4
PCDHGA3-202ENST00000612467 PPP1R3BQ86XI6 285 aa12.54□□□□□ -0.4
PCDHGA3-202ENST00000612467 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.54□□□□□ -0.4
PCDHGA3-202ENST00000612467 OR52N4Q8NGI2 321 aa12.54□□□□□ -0.4
PCDHGA3-202ENST00000612467 NUBPLQ8TB37 319 aa12.54□□□□□ -0.4
PCDHGA3-202ENST00000612467 DDIT4LQ96D03 193 aa12.54□□□□□ -0.4
PCDHGA3-202ENST00000612467 SLAMF6Q96DU3 332 aa12.54□□□□□ -0.4
PCDHGA3-202ENST00000612467 SCP2D1Q9UJQ7 156 aa12.54□□□□□ -0.4
PCDHGA3-202ENST00000612467 HHLA2Q9UM44 414 aa12.54□□□□□ -0.4
PCDHGA3-202ENST00000612467 WIF1Q9Y5W5 379 aa12.54□□□□□ -0.4
PCDHGA3-202ENST00000612467 TGM6O95932 706 aa12.53□□□□□ -0.4
PCDHGA3-202ENST00000612467 CD2P06729 351 aa12.53□□□□□ -0.4
PCDHGA3-202ENST00000612467 PRSS3P35030 304 aa12.53□□□□□ -0.4
PCDHGA3-202ENST00000612467 TMEM176BQ3YBM2 270 aaPredicted RBP12.53□□□□□ -0.4
PCDHGA3-202ENST00000612467 METTL11BQ5VVY1 283 aa12.53□□□□□ -0.4
PCDHGA3-202ENST00000612467 WDSUB1Q8N9V3 476 aa12.53□□□□□ -0.4
PCDHGA3-202ENST00000612467 PRO3102Q9H379 93 aa12.53□□□□□ -0.4
PCDHGA3-202ENST00000612467 FARSAQ9Y285 508 aaKnown RBP12.53□□□□□ -0.4
PCDHGA3-202ENST00000612467 A0A1B0GTQ1 180 aa12.53□□□□□ -0.4
PCDHGA3-202ENST00000612467 RGS11O94810 467 aa12.53□□□□□ -0.4
PCDHGA3-202ENST00000612467 TTRP02766 147 aa12.53□□□□□ -0.4
PCDHGA3-202ENST00000612467 TPOP07202 933 aa12.53□□□□□ -0.4
PCDHGA3-202ENST00000612467 CXCL2P19875 107 aa12.53□□□□□ -0.4
PCDHGA3-202ENST00000612467 DAP3P51398 398 aaKnown RBP12.53□□□□□ -0.4
PCDHGA3-202ENST00000612467 H2BFSP57053 126 aa12.53□□□□□ -0.4
PCDHGA3-202ENST00000612467 EXOSC2Q13868 293 aaKnown RBP12.53□□□□□ -0.4
PCDHGA3-202ENST00000612467 GRK1Q15835 563 aa12.53□□□□□ -0.4
PCDHGA3-202ENST00000612467 LPAL2Q16609 132 aa12.53□□□□□ -0.4
PCDHGA3-202ENST00000612467 NKPD1Q17RQ9 610 aa12.53□□□□□ -0.4
PCDHGA3-202ENST00000612467 DNM1P46Q6ZS02 220 aa12.53□□□□□ -0.4
PCDHGA3-202ENST00000612467 MUC20Q8N307 709 aaPredicted RBP12.53□□□□□ -0.4
PCDHGA3-202ENST00000612467 ZNF775Q96BV0 537 aaPredicted RBP12.53□□□□□ -0.4
PCDHGA3-202ENST00000612467 SEH1LQ96EE3 360 aa12.53□□□□□ -0.4
PCDHGA3-202ENST00000612467 DEFB126Q9BYW3 111 aa12.53□□□□□ -0.4
PCDHGA3-202ENST00000612467 ZNF319Q9P2F9 582 aa12.53□□□□□ -0.4
PCDHGA3-202ENST00000612467 CKLFQ9UBR5 152 aa12.53□□□□□ -0.4
PCDHGA3-202ENST00000612467 NAP1L6A6NFF2 107 aa12.53□□□□□ -0.4
PCDHGA3-202ENST00000612467 RER1O15258 196 aa12.53□□□□□ -0.4
PCDHGA3-202ENST00000612467 ZNF626Q68DY1 528 aa12.53□□□□□ -0.4
PCDHGA3-202ENST00000612467 TMED4Q7Z7H5 227 aa12.53□□□□□ -0.4
PCDHGA3-202ENST00000612467 GVQW1Q8N7I0 195 aa12.53□□□□□ -0.4
PCDHGA3-202ENST00000612467 OR13C9Q8NGT0 318 aa12.53□□□□□ -0.4
PCDHGA3-202ENST00000612467 CNTD2Q9H8S5 307 aa12.53□□□□□ -0.4
PCDHGA3-202ENST00000612467 NPTNQ9Y639 398 aa12.53□□□□□ -0.4
PCDHGA3-202ENST00000612467 MYO7BQ6PIF6 2116 aa12.52□□□□□ -0.4
PCDHGA3-202ENST00000612467 LOC105371267A0A1B0GV96 52 aa12.52□□□□□ -0.41
PCDHGA3-202ENST00000612467 CREBL2O60519 120 aaPredicted RBP12.52□□□□□ -0.41
PCDHGA3-202ENST00000612467 ZFAND5O76080 213 aa12.52□□□□□ -0.41
PCDHGA3-202ENST00000612467 SLC22A5O76082 557 aa12.52□□□□□ -0.41
PCDHGA3-202ENST00000612467 ABOP16442 354 aa12.52□□□□□ -0.41
PCDHGA3-202ENST00000612467 POU3F2P20265 443 aaPredicted RBP12.52□□□□□ -0.41
PCDHGA3-202ENST00000612467 OR3A3P47888 321 aa12.52□□□□□ -0.41
PCDHGA3-202ENST00000612467 SFRP5Q5T4F7 317 aa12.52□□□□□ -0.41
PCDHGA3-202ENST00000612467 GLT8D1Q68CQ7 371 aa12.52□□□□□ -0.41
PCDHGA3-202ENST00000612467 ZNF767PQ75MW2 155 aa12.52□□□□□ -0.41
PCDHGA3-202ENST00000612467 MISPQ8IVT2 679 aa12.52□□□□□ -0.41
PCDHGA3-202ENST00000612467 CLEC1AQ8NC01 280 aa12.52□□□□□ -0.41
PCDHGA3-202ENST00000612467 OR10H5Q8NGA6 315 aa12.52□□□□□ -0.41
PCDHGA3-202ENST00000612467 IFI44Q8TCB0 444 aa12.52□□□□□ -0.41
PCDHGA3-202ENST00000612467 OR51E1Q8TCB6 317 aa12.52□□□□□ -0.41
PCDHGA3-202ENST00000612467 JSRP1Q96MG2 331 aaPredicted RBP12.52□□□□□ -0.41
PCDHGA3-202ENST00000612467 SORCS2Q96PQ0 1159 aa12.52□□□□□ -0.41
PCDHGA3-202ENST00000612467 CDX2Q99626 313 aaPredicted RBP12.52□□□□□ -0.41
PCDHGA3-202ENST00000612467 MICU1Q9BPX6 476 aa12.52□□□□□ -0.41
PCDHGA3-202ENST00000612467 MRI1Q9BV20 369 aa12.52□□□□□ -0.41
PCDHGA3-202ENST00000612467 FAM206AQ9NX38 181 aa12.52□□□□□ -0.41
PCDHGA3-202ENST00000612467 FBXO4Q9UKT5 387 aa12.52□□□□□ -0.41
PCDHGA3-202ENST00000612467 POLR1DQ9Y2S0 133 aa12.52□□□□□ -0.41
PCDHGA3-202ENST00000612467 LHFPL6Q9Y693 200 aa12.52□□□□□ -0.41
PCDHGA3-202ENST00000612467 ASPMQ8IZT6 3477 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms