RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 MAP1AP78559 2803 aaPredicted RBP10.57□□□□□ -0.72
CBWD3-208ENST00000612050 LOC100509620A0A075B734 347 aa10.57□□□□□ -0.72
CBWD3-208ENST00000612050 ARRDC5A6NEK1 342 aa10.57□□□□□ -0.72
CBWD3-208ENST00000612050 RIIAD1A6NNX1 92 aa10.57□□□□□ -0.72
CBWD3-208ENST00000612050 CLPTM1O96005 669 aa10.57□□□□□ -0.72
CBWD3-208ENST00000612050 GASTP01350 101 aa10.57□□□□□ -0.72
CBWD3-208ENST00000612050 ZNF23P17027 643 aa10.57□□□□□ -0.72
CBWD3-208ENST00000612050 HNF1AP20823 631 aa10.57□□□□□ -0.72
CBWD3-208ENST00000612050 PAICSP22234 425 aaKnown RBP10.57□□□□□ -0.72
CBWD3-208ENST00000612050 GIFP27352 417 aa10.57□□□□□ -0.72
CBWD3-208ENST00000612050 FXYD6P3P58550 94 aa10.57□□□□□ -0.72
CBWD3-208ENST00000612050 ECH1Q13011 328 aa10.57□□□□□ -0.72
CBWD3-208ENST00000612050 SPATA46Q5T0L3 261 aa10.57□□□□□ -0.72
CBWD3-208ENST00000612050 MBNL2Q5VZF2 373 aaKnown RBP10.57□□□□□ -0.72
CBWD3-208ENST00000612050 FAM166AQ6J272 317 aa10.57□□□□□ -0.72
CBWD3-208ENST00000612050 VASH1Q7L8A9 365 aaPredicted RBP10.57□□□□□ -0.72
CBWD3-208ENST00000612050 PEG10Q86TG7 708 aaKnown RBP10.57□□□□□ -0.72
CBWD3-208ENST00000612050 OR4C15Q8NGM1 316 aa10.57□□□□□ -0.72
CBWD3-208ENST00000612050 OR1F12Q8NHA8 337 aa10.57□□□□□ -0.72
CBWD3-208ENST00000612050 KLF14Q8TD94 323 aaPredicted RBP10.57□□□□□ -0.72
CBWD3-208ENST00000612050 TIMD4Q96H15 378 aa10.57□□□□□ -0.72
CBWD3-208ENST00000612050 POM121Q96HA1 1249 aa10.57□□□□□ -0.72
CBWD3-208ENST00000612050 PITX2Q99697 317 aa10.57□□□□□ -0.72
CBWD3-208ENST00000612050 DGCR6LQ9BY27 220 aa10.57□□□□□ -0.72
CBWD3-208ENST00000612050 OR2J1Q9GZK6 312 aa10.57□□□□□ -0.72
CBWD3-208ENST00000612050 MMADHCQ9H3L0 296 aaPredicted RBP10.57□□□□□ -0.72
CBWD3-208ENST00000612050 SAP30LQ9HAJ7 183 aa10.57□□□□□ -0.72
CBWD3-208ENST00000612050 KIF17Q9P2E2 1029 aa10.57□□□□□ -0.72
CBWD3-208ENST00000612050 LPAR3Q9UBY5 353 aa10.57□□□□□ -0.72
CBWD3-208ENST00000612050 KCNS2Q9ULS6 477 aa10.57□□□□□ -0.72
CBWD3-208ENST00000612050 VWC2LB2RUY7 222 aa10.56□□□□□ -0.72
CBWD3-208ENST00000612050 ACOT8O14734 319 aa10.56□□□□□ -0.72
CBWD3-208ENST00000612050 SURF4O15260 269 aa10.56□□□□□ -0.72
CBWD3-208ENST00000612050 ICMTO60725 284 aa10.56□□□□□ -0.72
CBWD3-208ENST00000612050 IFNA2P01563 188 aa10.56□□□□□ -0.72
CBWD3-208ENST00000612050 PCMT1P22061 227 aa10.56□□□□□ -0.72
CBWD3-208ENST00000612050 TMEM33P57088 247 aa10.56□□□□□ -0.72
CBWD3-208ENST00000612050 ERVS71-1P61550 626 aa10.56□□□□□ -0.72
CBWD3-208ENST00000612050 SLC3A1Q07837 685 aa10.56□□□□□ -0.72
CBWD3-208ENST00000612050 HFEQ30201 348 aa10.56□□□□□ -0.72
CBWD3-208ENST00000612050 KRTAP21-3Q3LHN1 58 aa10.56□□□□□ -0.72
CBWD3-208ENST00000612050 ELFN2Q5R3F8 820 aa10.56□□□□□ -0.72
CBWD3-208ENST00000612050 DMRTA1Q5VZB9 504 aa10.56□□□□□ -0.72
CBWD3-208ENST00000612050 ZNF101Q8IZC7 436 aa10.56□□□□□ -0.72
CBWD3-208ENST00000612050 OR6V1Q8N148 313 aa10.56□□□□□ -0.72
CBWD3-208ENST00000612050 CANT1Q8WVQ1 401 aa10.56□□□□□ -0.72
CBWD3-208ENST00000612050 HPS1Q92902 700 aa10.56□□□□□ -0.72
CBWD3-208ENST00000612050 APOBEC3DQ96AK3 386 aaPredicted RBP10.56□□□□□ -0.72
CBWD3-208ENST00000612050 ELMOD3Q96FG2 381 aa10.56□□□□□ -0.72
CBWD3-208ENST00000612050 MARS2Q96GW9 593 aaKnown RBP10.56□□□□□ -0.72
CBWD3-208ENST00000612050 TSSK2Q96PF2 358 aa10.56□□□□□ -0.72
CBWD3-208ENST00000612050 COQ7Q99807 217 aa10.56□□□□□ -0.72
CBWD3-208ENST00000612050 MYEF2Q9P2K5 600 aaKnown RBP10.56□□□□□ -0.72
CBWD3-208ENST00000612050 ACANP16112 2415 aa10.55□□□□□ -0.72
CBWD3-208ENST00000612050 IGLV1-36A0A0B4J1U3 117 aa10.55□□□□□ -0.72
CBWD3-208ENST00000612050 PPIHO43447 177 aaKnown RBP10.55□□□□□ -0.72
CBWD3-208ENST00000612050 SPRY3O43610 288 aa10.55□□□□□ -0.72
CBWD3-208ENST00000612050 DEAF1O75398 565 aaPredicted RBP10.55□□□□□ -0.72
CBWD3-208ENST00000612050 MPZL1O95297 269 aa10.55□□□□□ -0.72
CBWD3-208ENST00000612050 ANXA8P13928 327 aa10.55□□□□□ -0.72
CBWD3-208ENST00000612050 HOXB4P17483 251 aaPredicted RBP10.55□□□□□ -0.72
CBWD3-208ENST00000612050 FMO3P31513 532 aa10.55□□□□□ -0.72
CBWD3-208ENST00000612050 WNT5AP41221 380 aa10.55□□□□□ -0.72
CBWD3-208ENST00000612050 CCL8P80075 99 aa10.55□□□□□ -0.72
CBWD3-208ENST00000612050 CBX1P83916 185 aa10.55□□□□□ -0.72
CBWD3-208ENST00000612050 PPP1R8Q12972 351 aaKnown RBP10.55□□□□□ -0.72
CBWD3-208ENST00000612050 MALLQ13021 153 aa10.55□□□□□ -0.72
CBWD3-208ENST00000612050 TSTQ16762 297 aaKnown RBP10.55□□□□□ -0.72
CBWD3-208ENST00000612050 CHRFAM7AQ494W8 412 aa10.55□□□□□ -0.72
CBWD3-208ENST00000612050 C6orf52Q5T4I8 152 aa10.55□□□□□ -0.72
CBWD3-208ENST00000612050 RFPL4BQ6ZWI9 263 aa10.55□□□□□ -0.72
CBWD3-208ENST00000612050 ZBTB46Q86UZ6 589 aa10.55□□□□□ -0.72
CBWD3-208ENST00000612050 ADGRG5Q8IZF4 528 aa10.55□□□□□ -0.72
CBWD3-208ENST00000612050 LNX2Q8N448 690 aa10.55□□□□□ -0.72
CBWD3-208ENST00000612050 SLC26A10Q8NG04 563 aa10.55□□□□□ -0.72
CBWD3-208ENST00000612050 SPTSSAQ969W0 71 aa10.55□□□□□ -0.72
CBWD3-208ENST00000612050 OTULINQ96BN8 352 aa10.55□□□□□ -0.72
CBWD3-208ENST00000612050 PLEKHA8Q96JA3 519 aa10.55□□□□□ -0.72
CBWD3-208ENST00000612050 ATF6BQ99941 703 aa10.55□□□□□ -0.72
CBWD3-208ENST00000612050 HCAR1Q9BXC0 346 aa10.55□□□□□ -0.72
CBWD3-208ENST00000612050 PDP1Q9P0J1 537 aaPredicted RBP10.55□□□□□ -0.72
CBWD3-208ENST00000612050 CDC42EP3Q9UKI2 254 aa10.55□□□□□ -0.72
CBWD3-208ENST00000612050 POMPQ9Y244 141 aa10.55□□□□□ -0.72
CBWD3-208ENST00000612050 C2CD3Q4AC94 2353 aa10.55□□□□□ -0.72
CBWD3-208ENST00000612050 IGHV1-69-2A0A0G2JMI3 117 aa10.54□□□□□ -0.72
CBWD3-208ENST00000612050 LOC100289279A0A1B0GTE1 492 aa10.54□□□□□ -0.72
CBWD3-208ENST00000612050 OR6C68A6NDL8 312 aa10.54□□□□□ -0.72
CBWD3-208ENST00000612050 CLDN25C9JDP6 229 aa10.54□□□□□ -0.72
CBWD3-208ENST00000612050 BHLHE40O14503 412 aa10.54□□□□□ -0.72
CBWD3-208ENST00000612050 RER1O15258 196 aa10.54□□□□□ -0.72
CBWD3-208ENST00000612050 CIB2O75838 187 aa10.54□□□□□ -0.72
CBWD3-208ENST00000612050 SOX14O95416 240 aa10.54□□□□□ -0.72
CBWD3-208ENST00000612050 HPXP02790 462 aa10.54□□□□□ -0.72
CBWD3-208ENST00000612050 SCG5P05408 212 aa10.54□□□□□ -0.72
CBWD3-208ENST00000612050 GAAP10253 952 aa10.54□□□□□ -0.72
CBWD3-208ENST00000612050 SELEP16581 610 aa10.54□□□□□ -0.72
CBWD3-208ENST00000612050 TNFRSF1AP19438 455 aa10.54□□□□□ -0.72
CBWD3-208ENST00000612050 CDH15P55291 814 aa10.54□□□□□ -0.72
CBWD3-208ENST00000612050 TPTEP56180 551 aa10.54□□□□□ -0.72
CBWD3-208ENST00000612050 BNIP1Q12981 228 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms