RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 CHST11Q9NPF2 352 aa15.4■□□□□ 0.06
NEK3-206ENST00000611833 FXYD6-FXYD2A0A087WZ82 144 aa15.4■□□□□ 0.06
NEK3-206ENST00000611833 H3BML4 177 aa15.4■□□□□ 0.06
NEK3-206ENST00000611833 P2RY10O00398 339 aa15.4■□□□□ 0.06
NEK3-206ENST00000611833 AQP8O94778 261 aa15.4■□□□□ 0.06
NEK3-206ENST00000611833 TIAF1O95411 115 aa15.4■□□□□ 0.06
NEK3-206ENST00000611833 GABRA1P14867 456 aa15.4■□□□□ 0.06
NEK3-206ENST00000611833 TMEM244Q5VVB8 128 aa15.4■□□□□ 0.06
NEK3-206ENST00000611833 TMEM229BQ8NBD8 167 aa15.4■□□□□ 0.06
NEK3-206ENST00000611833 FXYD6Q9H0Q3 95 aa15.4■□□□□ 0.06
NEK3-206ENST00000611833 POFUT1Q9H488 388 aa15.4■□□□□ 0.06
NEK3-206ENST00000611833 ZMAT3Q9HA38 289 aaKnown RBP15.4■□□□□ 0.06
NEK3-206ENST00000611833 SCPEP1Q9HB40 452 aa15.4■□□□□ 0.06
NEK3-206ENST00000611833 IGLV3-12A0A075B6K2 115 aa15.39■□□□□ 0.05
NEK3-206ENST00000611833 IGKV1D-43A0A0B4J1Z2 117 aa15.39■□□□□ 0.05
NEK3-206ENST00000611833 VSTM2BA6NLU5 285 aa15.39■□□□□ 0.05
NEK3-206ENST00000611833 LMX1BO60663 402 aa15.39■□□□□ 0.05
NEK3-206ENST00000611833 RRASP10301 218 aa15.39■□□□□ 0.05
NEK3-206ENST00000611833 PMPCAQ10713 525 aa15.39■□□□□ 0.05
NEK3-206ENST00000611833 AANATQ16613 207 aa15.39■□□□□ 0.05
NEK3-206ENST00000611833 OR10K2Q6IF99 312 aa15.39■□□□□ 0.05
NEK3-206ENST00000611833 IDO2Q6ZQW0 420 aa15.39■□□□□ 0.05
NEK3-206ENST00000611833 CCDC107Q8WV48 283 aa15.39■□□□□ 0.05
NEK3-206ENST00000611833 B3GNT4Q9C0J1 378 aa15.39■□□□□ 0.05
NEK3-206ENST00000611833 M0QYG6 137 aa15.39■□□□□ 0.05
NEK3-206ENST00000611833 RGS11O94810 467 aa15.39■□□□□ 0.05
NEK3-206ENST00000611833 CYB5AP00167 134 aa15.39■□□□□ 0.05
NEK3-206ENST00000611833 S100A11P31949 105 aa15.39■□□□□ 0.05
NEK3-206ENST00000611833 FOXF1Q12946 379 aa15.39■□□□□ 0.05
NEK3-206ENST00000611833 TSSK4Q6SA08 328 aa15.39■□□□□ 0.05
NEK3-206ENST00000611833 OR10H5Q8NGA6 315 aa15.39■□□□□ 0.05
NEK3-206ENST00000611833 NKD1Q969G9 470 aa15.39■□□□□ 0.05
NEK3-206ENST00000611833 EMC6Q9BV81 110 aa15.39■□□□□ 0.05
NEK3-206ENST00000611833 KLRF1Q9NZS2 232 aa15.39■□□□□ 0.05
NEK3-206ENST00000611833 HRH3Q9Y5N1 445 aa15.39■□□□□ 0.05
NEK3-206ENST00000611833 TRBV11-1A0A0K0K1C0 115 aa15.38■□□□□ 0.05
NEK3-206ENST00000611833 HMSDA8MTL9 139 aa15.38■□□□□ 0.05
NEK3-206ENST00000611833 SHISA8B8ZZ34 492 aa15.38■□□□□ 0.05
NEK3-206ENST00000611833 AMY2AP04746 511 aa15.38■□□□□ 0.05
NEK3-206ENST00000611833 ITGB2P05107 769 aa15.38■□□□□ 0.05
NEK3-206ENST00000611833 UBCP0CG48 685 aaKnown RBP15.38■□□□□ 0.05
NEK3-206ENST00000611833 ZNF250P15622 560 aa15.38■□□□□ 0.05
NEK3-206ENST00000611833 EIF1AXP47813 144 aaKnown RBP15.38■□□□□ 0.05
NEK3-206ENST00000611833 SUMO3P55854 103 aaPredicted RBP15.38■□□□□ 0.05
NEK3-206ENST00000611833 GMFBP60983 142 aa15.38■□□□□ 0.05
NEK3-206ENST00000611833 PCK2Q16822 640 aa15.38■□□□□ 0.05
NEK3-206ENST00000611833 NHLRC3Q5JS37 347 aa15.38■□□□□ 0.05
NEK3-206ENST00000611833 TMEM71Q6P5X7 295 aa15.38■□□□□ 0.05
NEK3-206ENST00000611833 DEGS2Q6QHC5 323 aa15.38■□□□□ 0.05
NEK3-206ENST00000611833 TMED4Q7Z7H5 227 aa15.38■□□□□ 0.05
NEK3-206ENST00000611833 NKAIN3Q8N8D7 197 aa15.38■□□□□ 0.05
NEK3-206ENST00000611833 TINAGL1Q9GZM7 467 aaPredicted RBP15.38■□□□□ 0.05
NEK3-206ENST00000611833 SLCO5A1Q9H2Y9 848 aa15.38■□□□□ 0.05
NEK3-206ENST00000611833 NARFLQ9H6Q4 476 aa15.38■□□□□ 0.05
NEK3-206ENST00000611833 RDH8Q9NYR8 311 aa15.38■□□□□ 0.05
NEK3-206ENST00000611833 ZNF224Q9NZL3 707 aa15.38■□□□□ 0.05
NEK3-206ENST00000611833 LOC101059948A0A1B0GTJ6 334 aa15.38■□□□□ 0.05
NEK3-206ENST00000611833 TMEM82A0PJX8 343 aa15.38■□□□□ 0.05
NEK3-206ENST00000611833 TUBAL3A6NHL2 446 aa15.38■□□□□ 0.05
NEK3-206ENST00000611833 TMEM200CA6NKL6 621 aa15.38■□□□□ 0.05
NEK3-206ENST00000611833 ZNF208O43345 1280 aa15.38■□□□□ 0.05
NEK3-206ENST00000611833 RP2O75695 350 aa15.38■□□□□ 0.05
NEK3-206ENST00000611833 CD37P11049 281 aa15.38■□□□□ 0.05
NEK3-206ENST00000611833 BIDP55957 195 aa15.38■□□□□ 0.05
NEK3-206ENST00000611833 HLXQ14774 488 aaPredicted RBP15.38■□□□□ 0.05
NEK3-206ENST00000611833 NKAIN1Q4KMZ8 207 aa15.38■□□□□ 0.05
NEK3-206ENST00000611833 SFRP5Q5T4F7 317 aa15.38■□□□□ 0.05
NEK3-206ENST00000611833 DCAF12L2Q5VW00 463 aa15.38■□□□□ 0.05
NEK3-206ENST00000611833 KLHL24Q6TFL4 600 aa15.38■□□□□ 0.05
NEK3-206ENST00000611833 TMUB2Q71RG4 321 aa15.38■□□□□ 0.05
NEK3-206ENST00000611833 RABEPKQ7Z6M1 372 aa15.38■□□□□ 0.05
NEK3-206ENST00000611833 GALNT16Q8N428 558 aa15.38■□□□□ 0.05
NEK3-206ENST00000611833 NUBPLQ8TB37 319 aa15.38■□□□□ 0.05
NEK3-206ENST00000611833 FGGYQ96C11 551 aa15.38■□□□□ 0.05
NEK3-206ENST00000611833 FOXRED1Q96CU9 486 aaPredicted RBP15.38■□□□□ 0.05
NEK3-206ENST00000611833 ALX4Q9H161 411 aaPredicted RBP15.38■□□□□ 0.05
NEK3-206ENST00000611833 KIF25Q9UIL4 384 aa15.38■□□□□ 0.05
NEK3-206ENST00000611833 FARSAQ9Y285 508 aaKnown RBP15.38■□□□□ 0.05
NEK3-206ENST00000611833 A0A0A6YYH2 397 aa15.37■□□□□ 0.05
NEK3-206ENST00000611833 TEX51A0A1B0GUA7 166 aa15.37■□□□□ 0.05
NEK3-206ENST00000611833 A6NJ64 397 aa15.37■□□□□ 0.05
NEK3-206ENST00000611833 OR6C65A6NJZ3 312 aa15.37■□□□□ 0.05
NEK3-206ENST00000611833 ZNF736B4DX44 427 aaPredicted RBP15.37■□□□□ 0.05
NEK3-206ENST00000611833 ALOX12BO75342 701 aa15.37■□□□□ 0.05
NEK3-206ENST00000611833 GNALP38405 381 aa15.37■□□□□ 0.05
NEK3-206ENST00000611833 MOGAT2Q3SYC2 334 aa15.37■□□□□ 0.05
NEK3-206ENST00000611833 C1orf100Q5SVJ3 147 aa15.37■□□□□ 0.05
NEK3-206ENST00000611833 PAPD4Q6PIY7 484 aaKnown RBP15.37■□□□□ 0.05
NEK3-206ENST00000611833 ACBD4Q8NC06 268 aa15.37■□□□□ 0.05
NEK3-206ENST00000611833 OR4D6Q8NGJ1 314 aa15.37■□□□□ 0.05
NEK3-206ENST00000611833 RNF133Q8WVZ7 376 aa15.37■□□□□ 0.05
NEK3-206ENST00000611833 OR6C1Q96RD1 312 aa15.37■□□□□ 0.05
NEK3-206ENST00000611833 SLC25A21Q9BQT8 299 aaPredicted RBP15.37■□□□□ 0.05
NEK3-206ENST00000611833 ARL6Q9H0F7 186 aa15.37■□□□□ 0.05
NEK3-206ENST00000611833 PPP4R1LQ9P1A2 415 aa15.37■□□□□ 0.05
NEK3-206ENST00000611833 KIF26BQ2KJY2 2108 aa15.37■□□□□ 0.05
NEK3-206ENST00000611833 METTL21EPA6NDL7 271 aa15.37■□□□□ 0.05
NEK3-206ENST00000611833 NPIPB13A6NJU9 1138 aa15.37■□□□□ 0.05
NEK3-206ENST00000611833 LIPT2A6NK58 231 aa15.37■□□□□ 0.05
NEK3-206ENST00000611833 NPIPB4C9JG80 1138 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 209.1 ms