RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 SERPINA2P20848 420 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 LUMP51884 338 aaPredicted RBP7.83□□□□□ -1.16
LIG4-204ENST00000611712 GABREP78334 506 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 GGTLC2Q14390 218 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 LGALSLQ3ZCW2 172 aaPredicted RBP7.83□□□□□ -1.16
LIG4-204ENST00000611712 FAM76BQ5HYJ3 339 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 MCEMP1Q8IX19 187 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 RNF128Q8TEB7 428 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 CPNE2Q96FN4 548 aaPredicted RBP7.83□□□□□ -1.16
LIG4-204ENST00000611712 MICU1Q9BPX6 476 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 TINAGL1Q9GZM7 467 aaPredicted RBP7.83□□□□□ -1.16
LIG4-204ENST00000611712 VN1R1Q9GZP7 353 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 A0A1W2PNR3 127 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 ZNF705EA8MWA4 302 aaPredicted RBP7.83□□□□□ -1.16
LIG4-204ENST00000611712 ALG1L2C9J202 215 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 MPZL1O95297 269 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 APOC1P02654 83 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 FASLGP48023 281 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 CLDN17P56750 224 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 RNF4P78317 190 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 EBPQ15125 230 aaKnown RBP7.83□□□□□ -1.16
LIG4-204ENST00000611712 ZNF585AQ6P3V2 769 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 GLIPR1L1Q6UWM5 242 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 SYT13Q7L8C5 426 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 FJX1Q86VR8 437 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 CDC20BQ86Y33 519 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 ZNF485Q8NCK3 441 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 OR1J4Q8NGS1 313 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 OR1L3Q8NH93 324 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 OR51E1Q8TCB6 317 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 STK35Q8TDR2 534 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 PTPMT1Q8WUK0 201 aaPredicted RBP7.83□□□□□ -1.16
LIG4-204ENST00000611712 C8orf44Q96CB5 159 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 WDR89Q96FK6 387 aaPredicted RBP7.83□□□□□ -1.16
LIG4-204ENST00000611712 FOXQ1Q9C009 403 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 BANF2Q9H503 90 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 EXOSC3Q9NQT5 275 aaKnown RBP7.83□□□□□ -1.16
LIG4-204ENST00000611712 MTCL1Q9Y4B5 1905 aaKnown RBP7.83□□□□□ -1.16
LIG4-204ENST00000611712 A6NCN8 305 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 G3V3Y1 287 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 PIN1P1O15428 100 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 S100A6P06703 90 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 S100GP29377 79 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 THBS2P35442 1172 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 GLP1RP43220 463 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 CLDN6P56747 220 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 SNRPNP63162 240 aaKnown RBP7.82□□□□□ -1.16
LIG4-204ENST00000611712 RSU1Q15404 277 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 AANATQ16613 207 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 PXDC1Q5TGL8 231 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 MDGA2Q7Z553 956 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 MUC20Q8N307 709 aaPredicted RBP7.82□□□□□ -1.16
LIG4-204ENST00000611712 LRRC18Q8N456 261 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 OR1M1Q8NGA1 313 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 ANGPTL6Q8NI99 470 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 KCNG3Q8TAE7 436 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 TOMM40LQ969M1 308 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 ACKR4Q9NPB9 350 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 PLEKHJ1Q9NW61 149 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 ASH2LQ9UBL3 628 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 FBXO9Q9UK97 447 aaPredicted RBP7.82□□□□□ -1.16
LIG4-204ENST00000611712 PTRH2Q9Y3E5 179 aaKnown RBP7.82□□□□□ -1.16
LIG4-204ENST00000611712 EPOPA6NHQ4 379 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 SHISA8B8ZZ34 492 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 LCATP04180 440 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 HOXB5P09067 269 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 GLULP15104 373 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 FOLR1P15328 257 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 DPP4P27487 766 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 SPIN3Q5JUX0 258 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 ARSKQ6UWY0 536 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 UNQ6126/PRO20091Q6UXV3 157 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 C17orf107Q6ZR85 190 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 RELL2Q8NC24 303 aaPredicted RBP7.82□□□□□ -1.16
LIG4-204ENST00000611712 OR4S1Q8NGB4 309 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 ST8SIA1Q92185 356 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 HIST1H2AAQ96QV6 131 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 EHFQ9NZC4 300 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 SLC22A23A1A5C7 686 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 OR5H14A6NHG9 310 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 LEUTXA8MZ59 168 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 ADAM11O75078 769 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 GABRR1P24046 479 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 CEBPGP53567 150 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 HERV-K104P61576 105 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 MC2RQ01718 297 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 ZNF626Q68DY1 528 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 SIGIRRQ6IA17 410 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 LCN10Q6JVE6 187 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 TRILQ7L0X0 811 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 SHISA5Q8N114 240 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 PAQR8Q8TEZ7 354 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 ATOH1Q92858 354 aaPredicted RBP7.82□□□□□ -1.16
LIG4-204ENST00000611712 SOSTQ9BQB4 213 aa7.82□□□□□ -1.16
LIG4-204ENST00000611712 A0A0G2JK05 382 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 TMEM272A0A1B0GTI8 110 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 OR6C76A6NM76 312 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 FADS1O60427 444 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 SRFP11831 508 aa7.81□□□□□ -1.16
LIG4-204ENST00000611712 TPT1P13693 172 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms