RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 IL22RA1Q8N6P7 574 aa11.26□□□□□ -0.61
CDH1-212ENST00000611625 GJC3Q8NFK1 279 aa11.26□□□□□ -0.61
CDH1-212ENST00000611625 SLC25A43Q8WUT9 341 aaPredicted RBP11.26□□□□□ -0.61
CDH1-212ENST00000611625 SPACA5Q96QH8 159 aa11.26□□□□□ -0.61
CDH1-212ENST00000611625 CNTNAP3Q9BZ76 1288 aa11.26□□□□□ -0.61
CDH1-212ENST00000611625 SLC25A31Q9H0C2 315 aa11.26□□□□□ -0.61
CDH1-212ENST00000611625 ENY2Q9NPA8 101 aa11.26□□□□□ -0.61
CDH1-212ENST00000611625 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.26□□□□□ -0.61
CDH1-212ENST00000611625 LRFN1Q9P244 771 aa11.26□□□□□ -0.61
CDH1-212ENST00000611625 OR5V1Q9UGF6 321 aa11.26□□□□□ -0.61
CDH1-212ENST00000611625 CSAG2Q9Y5P2 127 aa11.26□□□□□ -0.61
CDH1-212ENST00000611625 LILRB5O75023 590 aa11.26□□□□□ -0.61
CDH1-212ENST00000611625 GDF1P27539 372 aa11.26□□□□□ -0.61
CDH1-212ENST00000611625 MAGEB1P43366 347 aa11.26□□□□□ -0.61
CDH1-212ENST00000611625 PNLIPRP2P54317 469 aa11.26□□□□□ -0.61
CDH1-212ENST00000611625 RIN1Q13671 783 aa11.26□□□□□ -0.61
CDH1-212ENST00000611625 AAED1Q7RTV5 226 aa11.26□□□□□ -0.61
CDH1-212ENST00000611625 ST8SIA1Q92185 356 aa11.26□□□□□ -0.61
CDH1-212ENST00000611625 HAO2Q9NYQ3 351 aa11.26□□□□□ -0.61
CDH1-212ENST00000611625 SPTY2D1-AS1A0A0U1RR47 76 aa11.26□□□□□ -0.61
CDH1-212ENST00000611625 EIF1BO60739 113 aaKnown RBP11.26□□□□□ -0.61
CDH1-212ENST00000611625 ZNF728P0DKX0 622 aa11.26□□□□□ -0.61
CDH1-212ENST00000611625 B3GALT5Q9Y2C3 310 aa11.26□□□□□ -0.61
CDH1-212ENST00000611625 A0A1W2PPC4 97 aa11.26□□□□□ -0.61
CDH1-212ENST00000611625 MOSPD3O75425 235 aa11.26□□□□□ -0.61
CDH1-212ENST00000611625 SERPINF1P36955 418 aa11.26□□□□□ -0.61
CDH1-212ENST00000611625 ELFN2Q5R3F8 820 aa11.26□□□□□ -0.61
CDH1-212ENST00000611625 PTP4A1Q93096 173 aa11.26□□□□□ -0.61
CDH1-212ENST00000611625 CCDC74AQ96AQ1 378 aa11.26□□□□□ -0.61
CDH1-212ENST00000611625 ENKD1Q9H0I2 346 aa11.26□□□□□ -0.61
CDH1-212ENST00000611625 MOB1AQ9H8S9 216 aa11.26□□□□□ -0.61
CDH1-212ENST00000611625 PSMB6P28072 239 aa11.25□□□□□ -0.61
CDH1-212ENST00000611625 SNRPNP63162 240 aaKnown RBP11.25□□□□□ -0.61
CDH1-212ENST00000611625 AKR1C1Q04828 323 aa11.25□□□□□ -0.61
CDH1-212ENST00000611625 SIGIRRQ6IA17 410 aa11.25□□□□□ -0.61
CDH1-212ENST00000611625 H3F3CQ6NXT2 135 aa11.25□□□□□ -0.61
CDH1-212ENST00000611625 TMEM91Q6ZNR0 172 aa11.25□□□□□ -0.61
CDH1-212ENST00000611625 CDH26Q8IXH8 852 aa11.25□□□□□ -0.61
CDH1-212ENST00000611625 PRR18Q8N4B5 295 aa11.25□□□□□ -0.61
CDH1-212ENST00000611625 ZNF611Q8N823 705 aa11.25□□□□□ -0.61
CDH1-212ENST00000611625 STT3BQ8TCJ2 826 aa11.25□□□□□ -0.61
CDH1-212ENST00000611625 NANOS1Q8WY41 292 aaKnown RBP11.25□□□□□ -0.61
CDH1-212ENST00000611625 C4orf45Q96LM5 186 aa11.25□□□□□ -0.61
CDH1-212ENST00000611625 PAPOLGQ9BWT3 736 aaKnown RBP11.25□□□□□ -0.61
CDH1-212ENST00000611625 NELFAQ9H3P2 528 aa11.25□□□□□ -0.61
CDH1-212ENST00000611625 TMEM184BQ9Y519 407 aaPredicted RBP11.25□□□□□ -0.61
CDH1-212ENST00000611625 STMND1H3BQB6 276 aa11.25□□□□□ -0.61
CDH1-212ENST00000611625 SIGLEC6O43699 453 aa11.25□□□□□ -0.61
CDH1-212ENST00000611625 CBX7O95931 251 aa11.25□□□□□ -0.61
CDH1-212ENST00000611625 ADRB1P08588 477 aa11.25□□□□□ -0.61
CDH1-212ENST00000611625 CNR1P21554 472 aa11.25□□□□□ -0.61
CDH1-212ENST00000611625 UBE2NP61088 152 aaKnown RBP11.25□□□□□ -0.61
CDH1-212ENST00000611625 DUSP2Q05923 314 aa11.25□□□□□ -0.61
CDH1-212ENST00000611625 TEX19Q8NA77 164 aa11.25□□□□□ -0.61
CDH1-212ENST00000611625 ZBTB44Q8NCP5 570 aa11.25□□□□□ -0.61
CDH1-212ENST00000611625 OR14K1Q8NGZ2 314 aa11.25□□□□□ -0.61
CDH1-212ENST00000611625 ZCCHC4Q9H5U6 513 aa11.25□□□□□ -0.61
CDH1-212ENST00000611625 GAREM1Q9H706 876 aa11.25□□□□□ -0.61
CDH1-212ENST00000611625 EXOSC3Q9NQT5 275 aaKnown RBP11.25□□□□□ -0.61
CDH1-212ENST00000611625 GMDSO60547 372 aa11.25□□□□□ -0.61
CDH1-212ENST00000611625 MGMTP16455 207 aa11.25□□□□□ -0.61
CDH1-212ENST00000611625 HOXB9P17482 250 aaPredicted RBP11.25□□□□□ -0.61
CDH1-212ENST00000611625 LIMS1P48059 325 aa11.25□□□□□ -0.61
CDH1-212ENST00000611625 RPS18P62269 152 aaKnown RBP11.25□□□□□ -0.61
CDH1-212ENST00000611625 RPL23AP62750 156 aaKnown RBP11.25□□□□□ -0.61
CDH1-212ENST00000611625 WDR38Q5JTN6 314 aa11.25□□□□□ -0.61
CDH1-212ENST00000611625 TMED6Q8WW62 240 aa11.25□□□□□ -0.61
CDH1-212ENST00000611625 MTFP1Q9UDX5 166 aa11.25□□□□□ -0.61
CDH1-212ENST00000611625 SCN10AQ9Y5Y9 1956 aa11.25□□□□□ -0.61
CDH1-212ENST00000611625 CCDC163A0A0D9SF12 145 aa11.25□□□□□ -0.61
CDH1-212ENST00000611625 SMCO3A2RU48 225 aa11.25□□□□□ -0.61
CDH1-212ENST00000611625 ANKRD30BLA7E2S9 258 aa11.25□□□□□ -0.61
CDH1-212ENST00000611625 CD300LBA8K4G0 201 aa11.25□□□□□ -0.61
CDH1-212ENST00000611625 RAC2P15153 192 aa11.25□□□□□ -0.61
CDH1-212ENST00000611625 CDKN2AP42771 156 aaKnown RBP11.25□□□□□ -0.61
CDH1-212ENST00000611625 SSR4P51571 173 aa11.25□□□□□ -0.61
CDH1-212ENST00000611625 GPR85P60893 370 aa11.25□□□□□ -0.61
CDH1-212ENST00000611625 ZNF674Q2M3X9 581 aa11.25□□□□□ -0.61
CDH1-212ENST00000611625 NAXDQ8IW45 347 aa11.25□□□□□ -0.61
CDH1-212ENST00000611625 AGBL5Q8NDL9 886 aa11.25□□□□□ -0.61
CDH1-212ENST00000611625 ASB13Q8WXK3 278 aa11.25□□□□□ -0.61
CDH1-212ENST00000611625 ST8SIA2Q92186 375 aa11.25□□□□□ -0.61
CDH1-212ENST00000611625 PLA2G2FQ9BZM2 168 aa11.25□□□□□ -0.61
CDH1-212ENST00000611625 MCTS1Q9ULC4 181 aaKnown RBP11.25□□□□□ -0.61
CDH1-212ENST00000611625 OR6C76A6NM76 312 aa11.24□□□□□ -0.61
CDH1-212ENST00000611625 ZNF44P15621 663 aa11.24□□□□□ -0.61
CDH1-212ENST00000611625 HRH1P35367 487 aa11.24□□□□□ -0.61
CDH1-212ENST00000611625 FAM74A1Q5RGS3 127 aa11.24□□□□□ -0.61
CDH1-212ENST00000611625 ZNF684Q5T5D7 378 aa11.24□□□□□ -0.61
CDH1-212ENST00000611625 RAB11FIP2Q7L804 512 aa11.24□□□□□ -0.61
CDH1-212ENST00000611625 TMEM200AQ86VY9 491 aa11.24□□□□□ -0.61
CDH1-212ENST00000611625 IL1F10Q8WWZ1 152 aa11.24□□□□□ -0.61
CDH1-212ENST00000611625 ZNF681Q96N22 645 aa11.24□□□□□ -0.61
CDH1-212ENST00000611625 NMNAT2Q9BZQ4 307 aa11.24□□□□□ -0.61
CDH1-212ENST00000611625 NKX6-2Q9C056 277 aaPredicted RBP11.24□□□□□ -0.61
CDH1-212ENST00000611625 CDH20Q9HBT6 801 aa11.24□□□□□ -0.61
CDH1-212ENST00000611625 TRAPPC2LH3BP13 241 aa11.24□□□□□ -0.61
CDH1-212ENST00000611625 BET1O15155 118 aa11.24□□□□□ -0.61
CDH1-212ENST00000611625 LINC01565O15544 149 aa11.24□□□□□ -0.61
CDH1-212ENST00000611625 ATG12O94817 140 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms