RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 FJX1Q86VR8 437 aa20.08■□□□□ 0.81
SHANK2-220ENST00000608988 ZSCAN1Q8NBB4 408 aa20.08■□□□□ 0.81
SHANK2-220ENST00000608988 OR13C3Q8NGS6 347 aa20.08■□□□□ 0.81
SHANK2-220ENST00000608988 OR52N5Q8NH56 324 aa20.08■□□□□ 0.81
SHANK2-220ENST00000608988 BMFQ96LC9 184 aa20.08■□□□□ 0.81
SHANK2-220ENST00000608988 C12orf57Q99622 126 aa20.08■□□□□ 0.81
SHANK2-220ENST00000608988 CHMP1AQ9HD42 196 aaPredicted RBP20.08■□□□□ 0.81
SHANK2-220ENST00000608988 MRPL22Q9NWU5 206 aaKnown RBP20.08■□□□□ 0.81
SHANK2-220ENST00000608988 A0A0A6YYC8 382 aaPredicted RBP20.07■□□□□ 0.8
SHANK2-220ENST00000608988 I3L1I5 382 aaPredicted RBP20.07■□□□□ 0.8
SHANK2-220ENST00000608988 FADS1O60427 444 aa20.07■□□□□ 0.8
SHANK2-220ENST00000608988 SRSF10O75494 262 aaKnown RBP20.07■□□□□ 0.8
SHANK2-220ENST00000608988 APOC1P02654 83 aa20.07■□□□□ 0.8
SHANK2-220ENST00000608988 CLPSP04118 112 aa20.07■□□□□ 0.8
SHANK2-220ENST00000608988 TSC22D1Q15714 1073 aa20.07■□□□□ 0.8
SHANK2-220ENST00000608988 TRAPPC6BQ86SZ2 158 aa20.07■□□□□ 0.8
SHANK2-220ENST00000608988 TXNIPQ9H3M7 391 aa20.07■□□□□ 0.8
SHANK2-220ENST00000608988 CGGBP1Q9UFW8 167 aaPredicted RBP20.07■□□□□ 0.8
SHANK2-220ENST00000608988 LRP12Q9Y561 859 aa20.07■□□□□ 0.8
SHANK2-220ENST00000608988 HEATR5AQ86XA9 2040 aa20.07■□□□□ 0.8
SHANK2-220ENST00000608988 A0A0B4J2A0 478 aa20.07■□□□□ 0.8
SHANK2-220ENST00000608988 TMEM235A6NFC5 223 aa20.07■□□□□ 0.8
SHANK2-220ENST00000608988 GPANK1O95872 356 aa20.07■□□□□ 0.8
SHANK2-220ENST00000608988 HNRNPA2B1P22626 353 aaKnown RBP20.07■□□□□ 0.8
SHANK2-220ENST00000608988 CXCR1P25024 350 aa20.07■□□□□ 0.8
SHANK2-220ENST00000608988 AKR1D1P51857 326 aa20.07■□□□□ 0.8
SHANK2-220ENST00000608988 SEC13P55735 322 aa20.07■□□□□ 0.8
SHANK2-220ENST00000608988 BTG2P78543 158 aa20.07■□□□□ 0.8
SHANK2-220ENST00000608988 EIF2B1Q14232 305 aaKnown RBP20.07■□□□□ 0.8
SHANK2-220ENST00000608988 TMEM244Q5VVB8 128 aa20.07■□□□□ 0.8
SHANK2-220ENST00000608988 ARMC6Q6NXE6 501 aa20.07■□□□□ 0.8
SHANK2-220ENST00000608988 CORO6Q6QEF8 472 aa20.07■□□□□ 0.8
SHANK2-220ENST00000608988 CBLN3Q6UW01 205 aa20.07■□□□□ 0.8
SHANK2-220ENST00000608988 SLC35D2Q76EJ3 337 aa20.07■□□□□ 0.8
SHANK2-220ENST00000608988 PARGQ86W56 976 aa20.07■□□□□ 0.8
SHANK2-220ENST00000608988 JAGN1Q8N5M9 183 aa20.07■□□□□ 0.8
SHANK2-220ENST00000608988 GPBAR1Q8TDU6 330 aa20.07■□□□□ 0.8
SHANK2-220ENST00000608988 SAT2Q96F10 170 aaPredicted RBP20.07■□□□□ 0.8
SHANK2-220ENST00000608988 ABHD6Q9BV23 337 aa20.07■□□□□ 0.8
SHANK2-220ENST00000608988 FBLN5Q9UBX5 448 aa20.07■□□□□ 0.8
SHANK2-220ENST00000608988 SHPKQ9UHJ6 478 aa20.07■□□□□ 0.8
SHANK2-220ENST00000608988 K7EQS6 105 aa20.06■□□□□ 0.8
SHANK2-220ENST00000608988 EFSO43281 561 aa20.06■□□□□ 0.8
SHANK2-220ENST00000608988 NSA2O95478 260 aaKnown RBP20.06■□□□□ 0.8
SHANK2-220ENST00000608988 LYL1P12980 280 aa20.06■□□□□ 0.8
SHANK2-220ENST00000608988 RPL35P42766 123 aaKnown RBP20.06■□□□□ 0.8
SHANK2-220ENST00000608988 SLC6A9P48067 706 aa20.06■□□□□ 0.8
SHANK2-220ENST00000608988 AIMP2Q13155 320 aaKnown RBP20.06■□□□□ 0.8
SHANK2-220ENST00000608988 H3F3CQ6NXT2 135 aa20.06■□□□□ 0.8
SHANK2-220ENST00000608988 DEGS2Q6QHC5 323 aa20.06■□□□□ 0.8
SHANK2-220ENST00000608988 RHBDD3Q9Y3P4 386 aa20.06■□□□□ 0.8
SHANK2-220ENST00000608988 FAM25EA8MYX2 175 aa20.05■□□□□ 0.8
SHANK2-220ENST00000608988 BPNT1O95861 308 aa20.05■□□□□ 0.8
SHANK2-220ENST00000608988 CRABP1P29762 137 aa20.05■□□□□ 0.8
SHANK2-220ENST00000608988 PJVKQ0ZLH3 352 aa20.05■□□□□ 0.8
SHANK2-220ENST00000608988 NKPD1Q17RQ9 610 aa20.05■□□□□ 0.8
SHANK2-220ENST00000608988 MOGAT2Q3SYC2 334 aa20.05■□□□□ 0.8
SHANK2-220ENST00000608988 AVPI1Q5T686 147 aa20.05■□□□□ 0.8
SHANK2-220ENST00000608988 C19orf47Q8N9M1 422 aaKnown RBP20.05■□□□□ 0.8
SHANK2-220ENST00000608988 MRGPRFQ96AM1 343 aa20.05■□□□□ 0.8
SHANK2-220ENST00000608988 USB1Q9BQ65 265 aaKnown RBP20.05■□□□□ 0.8
SHANK2-220ENST00000608988 CTSFQ9UBX1 484 aa20.05■□□□□ 0.8
SHANK2-220ENST00000608988 DCDC2BA2VCK2 349 aa20.05■□□□□ 0.8
SHANK2-220ENST00000608988 LINC01553A4QN01 128 aa20.05■□□□□ 0.8
SHANK2-220ENST00000608988 RAB27BO00194 218 aa20.05■□□□□ 0.8
SHANK2-220ENST00000608988 SLC16A7O60669 478 aa20.05■□□□□ 0.8
SHANK2-220ENST00000608988 ACTL6AO96019 429 aa20.05■□□□□ 0.8
SHANK2-220ENST00000608988 HSD11B1P28845 292 aa20.05■□□□□ 0.8
SHANK2-220ENST00000608988 EIF5AP63241 154 aaKnown RBP20.05■□□□□ 0.8
SHANK2-220ENST00000608988 ACKR1Q16570 336 aa20.05■□□□□ 0.8
SHANK2-220ENST00000608988 TMEM196Q5HYL7 178 aa20.05■□□□□ 0.8
SHANK2-220ENST00000608988 TMEM88Q6PEY1 159 aa20.05■□□□□ 0.8
SHANK2-220ENST00000608988 PAQR4Q8N4S7 273 aaPredicted RBP20.05■□□□□ 0.8
SHANK2-220ENST00000608988 ELP5Q8TE02 316 aa20.05■□□□□ 0.8
SHANK2-220ENST00000608988 PAQR8Q8TEZ7 354 aa20.05■□□□□ 0.8
SHANK2-220ENST00000608988 GLYATL2Q8WU03 294 aa20.05■□□□□ 0.8
SHANK2-220ENST00000608988 DCUN1D4Q92564 292 aa20.05■□□□□ 0.8
SHANK2-220ENST00000608988 SLC46A1Q96NT5 459 aa20.05■□□□□ 0.8
SHANK2-220ENST00000608988 ELF4Q99607 663 aaPredicted RBP20.05■□□□□ 0.8
SHANK2-220ENST00000608988 FAM60AQ9NP50 221 aa20.05■□□□□ 0.8
SHANK2-220ENST00000608988 TMED7Q9Y3B3 224 aa20.05■□□□□ 0.8
SHANK2-220ENST00000608988 CSAG2Q9Y5P2 127 aa20.05■□□□□ 0.8
SHANK2-220ENST00000608988 C2orf16Q68DN1 1984 aa20.04■□□□□ 0.8
SHANK2-220ENST00000608988 H0Y8X5 98 aa20.04■□□□□ 0.8
SHANK2-220ENST00000608988 HCRTR1O43613 425 aa20.04■□□□□ 0.8
SHANK2-220ENST00000608988 PGAM2P15259 253 aa20.04■□□□□ 0.8
SHANK2-220ENST00000608988 ST6GAL1P15907 406 aa20.04■□□□□ 0.8
SHANK2-220ENST00000608988 ABOP16442 354 aa20.04■□□□□ 0.8
SHANK2-220ENST00000608988 MEOX2P50222 304 aa20.04■□□□□ 0.8
SHANK2-220ENST00000608988 INSM1Q01101 510 aaPredicted RBP20.04■□□□□ 0.8
SHANK2-220ENST00000608988 ACTBL2Q562R1 376 aa20.04■□□□□ 0.8
SHANK2-220ENST00000608988 TMEM71Q6P5X7 295 aa20.04■□□□□ 0.8
SHANK2-220ENST00000608988 CD163Q86VB7 1156 aa20.04■□□□□ 0.8
SHANK2-220ENST00000608988 OR4S1Q8NGB4 309 aa20.04■□□□□ 0.8
SHANK2-220ENST00000608988 UQCC2Q9BRT2 126 aa20.04■□□□□ 0.8
SHANK2-220ENST00000608988 OR52A1Q9UKL2 312 aa20.04■□□□□ 0.8
SHANK2-220ENST00000608988 CACNA1IQ9P0X4 2223 aa20.04■□□□□ 0.8
SHANK2-220ENST00000608988 LOC107986453A0A1B0GWG9 222 aa20.03■□□□□ 0.8
SHANK2-220ENST00000608988 C5orf51A6NDU8 294 aa20.03■□□□□ 0.8
SHANK2-220ENST00000608988 FRG2CA6NGY1 282 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms