RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 RAC2P15153 192 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 NCK1P16333 377 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 RHCEP18577 417 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 ADRA2CP18825 462 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 TNFRSF1AP19438 455 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 TNFSF4P23510 183 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 ZFP36P26651 326 aaKnown RBP6.43□□□□□ -1.38
CUX1-219ENST00000606749 SDHAP31040 664 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 MDH1P40925 334 aaKnown RBP6.43□□□□□ -1.38
CUX1-219ENST00000606749 CDKN2AP42771 156 aaKnown RBP6.43□□□□□ -1.38
CUX1-219ENST00000606749 HTR5AP47898 357 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 LIMS1P48059 325 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 COMPP49747 757 aaPredicted RBP6.43□□□□□ -1.38
CUX1-219ENST00000606749 FXYD6P3P58550 94 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 LSM6P62312 80 aaKnown RBP6.43□□□□□ -1.38
CUX1-219ENST00000606749 AQP6Q13520 282 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 SEC23BQ15437 767 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 KCNMB1Q16558 191 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 CCDC92Q53HC0 331 aaPredicted RBP6.43□□□□□ -1.38
CUX1-219ENST00000606749 OTPQ5XKR4 325 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 GLYATQ6IB77 296 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 DPY19L2P2Q6ZN68 376 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 PTCHD4Q6ZW05 846 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 LRRC28Q86X40 367 aaPredicted RBP6.43□□□□□ -1.38
CUX1-219ENST00000606749 GLB1L2Q8IW92 636 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 ZNF283Q8N7M2 679 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 NPEPL1Q8NDH3 523 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 OR2Z1Q8NG97 314 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 OR1F12Q8NHA8 337 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 ST7LQ8TDW4 575 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 PTP4A1Q93096 173 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 C7orf34Q96L11 122 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 ZNF570Q96NI8 536 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 GPX7Q96SL4 187 aaPredicted RBP6.43□□□□□ -1.38
CUX1-219ENST00000606749 NDEL1Q9GZM8 345 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 NUAK2Q9H093 628 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 SYT4Q9H2B2 425 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 RERGLQ9H628 205 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 MMP26Q9NRE1 261 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 DCAF13Q9NV06 445 aaKnown RBP6.43□□□□□ -1.38
CUX1-219ENST00000606749 PLEK2Q9NYT0 353 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 VSX1Q9NZR4 365 aaPredicted RBP6.43□□□□□ -1.38
CUX1-219ENST00000606749 ABCD2Q9UBJ2 740 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 IL19Q9UHD0 177 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 IL20RAQ9UHF4 553 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 RPS6KA6Q9UK32 745 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 IER3IP1Q9Y5U9 82 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 DYSFO75923 2080 aa6.42□□□□□ -1.38
CUX1-219ENST00000606749 TRBV4-1A0A0J9YWV2 114 aa6.42□□□□□ -1.38
CUX1-219ENST00000606749 UNC119BA6NIH7 251 aa6.42□□□□□ -1.38
CUX1-219ENST00000606749 TRAPPC2LH3BP13 241 aa6.42□□□□□ -1.38
CUX1-219ENST00000606749 SOCS2O14508 198 aa6.42□□□□□ -1.38
CUX1-219ENST00000606749 RER1O15258 196 aa6.42□□□□□ -1.38
CUX1-219ENST00000606749 FOXH1O75593 365 aa6.42□□□□□ -1.38
CUX1-219ENST00000606749 DIRAS1O95057 198 aa6.42□□□□□ -1.38
CUX1-219ENST00000606749 GPANK1O95872 356 aa6.42□□□□□ -1.38
CUX1-219ENST00000606749 TXNDC12O95881 172 aa6.42□□□□□ -1.38
CUX1-219ENST00000606749 FSHBP01225 129 aa6.42□□□□□ -1.38
CUX1-219ENST00000606749 DBHP09172 617 aa6.42□□□□□ -1.38
CUX1-219ENST00000606749 SLC6A9P48067 706 aa6.42□□□□□ -1.38
CUX1-219ENST00000606749 ERFP50548 548 aa6.42□□□□□ -1.38
CUX1-219ENST00000606749 NUDT2P50583 147 aa6.42□□□□□ -1.38
CUX1-219ENST00000606749 RPS6KA3P51812 740 aa6.42□□□□□ -1.38
CUX1-219ENST00000606749 PSME3P61289 254 aa6.42□□□□□ -1.38
CUX1-219ENST00000606749 HIST1H3AP68431 136 aa6.42□□□□□ -1.38
CUX1-219ENST00000606749 KRR1Q13601 381 aaKnown RBP6.42□□□□□ -1.38
CUX1-219ENST00000606749 HLXQ14774 488 aaPredicted RBP6.42□□□□□ -1.38
CUX1-219ENST00000606749 TMEM155Q4W5P6 130 aa6.42□□□□□ -1.38
CUX1-219ENST00000606749 FGD3Q5JSP0 725 aa6.42□□□□□ -1.38
CUX1-219ENST00000606749 HIST2H3PS2Q5TEC6 136 aa6.42□□□□□ -1.38
CUX1-219ENST00000606749 C1orf94Q6P1W5 598 aa6.42□□□□□ -1.38
CUX1-219ENST00000606749 HIST2H3AQ71DI3 136 aa6.42□□□□□ -1.38
CUX1-219ENST00000606749 ADCK1Q86TW2 530 aa6.42□□□□□ -1.38
CUX1-219ENST00000606749 KLHL36Q8N4N3 616 aa6.42□□□□□ -1.38
CUX1-219ENST00000606749 FAM86B1Q8N7N1 296 aa6.42□□□□□ -1.38
CUX1-219ENST00000606749 OR5L1Q8NGL2 311 aa6.42□□□□□ -1.38
CUX1-219ENST00000606749 OR52J3Q8NH60 311 aa6.42□□□□□ -1.38
CUX1-219ENST00000606749 ITLN1Q8WWA0 313 aa6.42□□□□□ -1.38
CUX1-219ENST00000606749 GCDHQ92947 438 aaPredicted RBP6.42□□□□□ -1.38
CUX1-219ENST00000606749 DVL3Q92997 716 aaPredicted RBP6.42□□□□□ -1.38
CUX1-219ENST00000606749 CMTM5Q96DZ9 223 aa6.42□□□□□ -1.38
CUX1-219ENST00000606749 RSRC1Q96IZ7 334 aaKnown RBP6.42□□□□□ -1.38
CUX1-219ENST00000606749 COG8Q96MW5 612 aa6.42□□□□□ -1.38
CUX1-219ENST00000606749 SIGLEC11Q96RL6 698 aa6.42□□□□□ -1.38
CUX1-219ENST00000606749 JMJD8Q96S16 334 aa6.42□□□□□ -1.38
CUX1-219ENST00000606749 GPA33Q99795 319 aa6.42□□□□□ -1.38
CUX1-219ENST00000606749 SLC6A7Q99884 636 aa6.42□□□□□ -1.38
CUX1-219ENST00000606749 FUZQ9BT04 418 aa6.42□□□□□ -1.38
CUX1-219ENST00000606749 SUCNR1Q9BXA5 334 aa6.42□□□□□ -1.38
CUX1-219ENST00000606749 MYLK2Q9H1R3 596 aa6.42□□□□□ -1.38
CUX1-219ENST00000606749 PATZ1Q9HBE1 687 aaKnown RBP6.42□□□□□ -1.38
CUX1-219ENST00000606749 GCM1Q9NP62 436 aa6.42□□□□□ -1.38
CUX1-219ENST00000606749 ASH2LQ9UBL3 628 aa6.42□□□□□ -1.38
CUX1-219ENST00000606749 AURKCQ9UQB9 309 aa6.42□□□□□ -1.38
CUX1-219ENST00000606749 PPP1R3CQ9UQK1 317 aa6.42□□□□□ -1.38
CUX1-219ENST00000606749 POLR3KQ9Y2Y1 108 aaPredicted RBP6.42□□□□□ -1.38
CUX1-219ENST00000606749 WNK2Q9Y3S1 2297 aa6.41□□□□□ -1.38
CUX1-219ENST00000606749 TMEM178BH3BS89 294 aa6.41□□□□□ -1.38
CUX1-219ENST00000606749 J3QW42 95 aa6.41□□□□□ -1.38
CUX1-219ENST00000606749 DCTN6O00399 190 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms