RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 ZNF670-ZNF695F2Z2N8 137 aa6.67□□□□□ -1.34
MSH6-211ENST00000606499 PSMD9O00233 223 aa6.67□□□□□ -1.34
MSH6-211ENST00000606499 MAGEB4O15481 346 aaPredicted RBP6.67□□□□□ -1.34
MSH6-211ENST00000606499 SIAH2O43255 324 aa6.67□□□□□ -1.34
MSH6-211ENST00000606499 SYNGR3O43761 229 aa6.67□□□□□ -1.34
MSH6-211ENST00000606499 TMCC2O75069 709 aa6.67□□□□□ -1.34
MSH6-211ENST00000606499 IGKV3-15P01624 115 aa6.67□□□□□ -1.34
MSH6-211ENST00000606499 IGLV1-44P01699 117 aa6.67□□□□□ -1.34
MSH6-211ENST00000606499 IGHA1P01876 353 aa6.67□□□□□ -1.34
MSH6-211ENST00000606499 SERPINA5P05154 406 aa6.67□□□□□ -1.34
MSH6-211ENST00000606499 DBHP09172 617 aa6.67□□□□□ -1.34
MSH6-211ENST00000606499 CECR9P0C854 216 aa6.67□□□□□ -1.34
MSH6-211ENST00000606499 CBR1P16152 277 aa6.67□□□□□ -1.34
MSH6-211ENST00000606499 ALOX5APP20292 161 aa6.67□□□□□ -1.34
MSH6-211ENST00000606499 COL8A1P27658 744 aa6.67□□□□□ -1.34
MSH6-211ENST00000606499 HTR5AP47898 357 aa6.67□□□□□ -1.34
MSH6-211ENST00000606499 CXCR4P61073 352 aa6.67□□□□□ -1.34
MSH6-211ENST00000606499 ZNF85Q03923 595 aa6.67□□□□□ -1.34
MSH6-211ENST00000606499 HGFACQ04756 655 aa6.67□□□□□ -1.34
MSH6-211ENST00000606499 BSPH1Q075Z2 132 aa6.67□□□□□ -1.34
MSH6-211ENST00000606499 RAB40BQ12829 278 aa6.67□□□□□ -1.34
MSH6-211ENST00000606499 KLHL22Q53GT1 634 aa6.67□□□□□ -1.34
MSH6-211ENST00000606499 ELFN2Q5R3F8 820 aa6.67□□□□□ -1.34
MSH6-211ENST00000606499 LRRN1Q6UXK5 716 aa6.67□□□□□ -1.34
MSH6-211ENST00000606499 DPPA2Q7Z7J5 298 aa6.67□□□□□ -1.34
MSH6-211ENST00000606499 PAQR4Q8N4S7 273 aaPredicted RBP6.67□□□□□ -1.34
MSH6-211ENST00000606499 ZNF454Q8N9F8 522 aa6.67□□□□□ -1.34
MSH6-211ENST00000606499 ACBD4Q8NC06 268 aa6.67□□□□□ -1.34
MSH6-211ENST00000606499 ZNF540Q8NDQ6 660 aa6.67□□□□□ -1.34
MSH6-211ENST00000606499 RNF133Q8WVZ7 376 aa6.67□□□□□ -1.34
MSH6-211ENST00000606499 GGHQ92820 318 aa6.67□□□□□ -1.34
MSH6-211ENST00000606499 DACH2Q96NX9 599 aa6.67□□□□□ -1.34
MSH6-211ENST00000606499 ATF6BQ99941 703 aa6.67□□□□□ -1.34
MSH6-211ENST00000606499 HDHD2Q9H0R4 259 aa6.67□□□□□ -1.34
MSH6-211ENST00000606499 C1orf198Q9H425 327 aa6.67□□□□□ -1.34
MSH6-211ENST00000606499 FGF20Q9NP95 211 aaPredicted RBP6.67□□□□□ -1.34
MSH6-211ENST00000606499 CENPMQ9NSP4 180 aa6.67□□□□□ -1.34
MSH6-211ENST00000606499 PLCXD1Q9NUJ7 323 aa6.67□□□□□ -1.34
MSH6-211ENST00000606499 DDX28Q9NUL7 540 aaKnown RBP6.67□□□□□ -1.34
MSH6-211ENST00000606499 MRPS18AQ9NVS2 196 aaKnown RBP6.67□□□□□ -1.34
MSH6-211ENST00000606499 FKBP14Q9NWM8 211 aa6.67□□□□□ -1.34
MSH6-211ENST00000606499 CRNNQ9UBG3 495 aaPredicted RBP6.67□□□□□ -1.34
MSH6-211ENST00000606499 FBXL3Q9UKT7 428 aa6.67□□□□□ -1.34
MSH6-211ENST00000606499 UNC79Q9P2D8 2635 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 SPTBN1Q01082 2364 aaKnown RBP6.66□□□□□ -1.34
MSH6-211ENST00000606499 IQCMA0A1B0GVH7 501 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.66□□□□□ -1.34
MSH6-211ENST00000606499 DAPL1A0PJW8 107 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 C5orf49A4QMS7 147 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 EFCAB10A6NFE3 127 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 DPRXA6NFQ7 191 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 DEFB108AA8MXU0 73 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 PTGES3LE9PB15 166 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 ATP6V1G2-DDX39BF2Z307 99 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 FADS2O95864 444 aaKnown RBP6.66□□□□□ -1.34
MSH6-211ENST00000606499 H2BFMP0C1H6 154 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 CCDC159P0C7I6 412 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 OR2T7P0C7T2 308 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 LIMS3P0CW19 117 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 LIMS4P0CW20 117 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 EPXP11678 715 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 PIPP12273 146 aaPredicted RBP6.66□□□□□ -1.34
MSH6-211ENST00000606499 CCNOP22674 350 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 CRYGSP22914 178 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 ANOS1P23352 680 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 CRHBPP24387 322 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 STOMP27105 288 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 CALCRP30988 508 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 APLNRP35414 380 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 OPRL1P41146 370 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 ETV1P50549 477 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 ACTC1P68032 377 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 ACTA1P68133 377 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 SLC35A2P78381 396 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 PLP2Q04941 152 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 ST3GAL4Q11206 333 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 RSPO1Q2MKA7 263 aaPredicted RBP6.66□□□□□ -1.34
MSH6-211ENST00000606499 RBM48Q5RL73 367 aaKnown RBP6.66□□□□□ -1.34
MSH6-211ENST00000606499 ZNF322Q6U7Q0 402 aaPredicted RBP6.66□□□□□ -1.34
MSH6-211ENST00000606499 TMEM108Q6UXF1 575 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 PLEKHG7Q6ZR37 379 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 KRT77Q7Z794 578 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 LHFPL3Q86UP9 236 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 ALDH16A1Q8IZ83 802 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 ACBD7Q8N6N7 88 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 FAM169BQ8N8A8 192 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 SLC30A7Q8NEW0 376 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 OR2T27Q8NH04 317 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 OR1F12Q8NHA8 337 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 FAM222BQ8WU58 562 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 PIK3IP1Q96FE7 263 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 PLPPR2Q96GM1 343 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 POM121L2Q96KW2 1035 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 PSMG3-AS1Q96PY0 264 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 HS3ST6Q96QI5 342 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 OR8B4Q96RC9 309 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 MNTQ99583 582 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 COPS4Q9BT78 406 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 WACQ9BTA9 647 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 MOV10Q9HCE1 1003 aaKnown RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms