RNA–Protein interactions for RNA: ENST00000604624.6

KCNMA1-223, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 1 (best)

Gene KCNMA1, Length 11,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-223	ENST00000604624	C11orf49	Q9H6J7	331 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	NAA60	Q9H7X0	242 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	EXOSC3	Q9NQT5	275 aa	Known RBP	3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	CA10	Q9NS85	328 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	IGKV3D-15	A0A087WSY6	115 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	GAGE10	A6NGK3	116 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	IGKV3-15	P01624	115 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	SPCS2	Q15005	226 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	PLA1A	Q53H76	456 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	HENMT1	Q5T8I9	393 aa	Known RBP	3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	IRGQ	Q8WZA9	623 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	PTX4	Q96A99	478 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	ZNF300	Q96RE9	604 aa	Predicted RBP	3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	GATA5	Q9BWX5	397 aa	Predicted RBP	3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	C12orf49	Q9H741	205 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	LHX6	Q9UPM6	363 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	FAM183A	A6NL82	134 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	ISLR	O14498	428 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	HOXA3	O43365	443 aa	Predicted RBP	3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	KCNAB3	O43448	404 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	ZNF623	O75123	536 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	RAF1	P04049	648 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	NID1	P14543	1247 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	HIST1H1C	P16403	213 aa	Known RBP	3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	SDC1	P18827	310 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	OPRK1	P41145	380 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	KCNJ3	P48549	501 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	RPS16	P62249	146 aa	Known RBP	3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	AES	Q08117	197 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	VEZF1	Q14119	521 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	ALKBH6	Q3KRA9	238 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	TMEM119	Q4V9L6	283 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	SLC35D3	Q5M8T2	416 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	C10orf62	Q5T681	223 aa	Predicted RBP	3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	GOLGA7	Q7Z5G4	137 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	PCED1B	Q96HM7	432 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	MED30	Q96HR3	178 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	ATP5S	Q99766	215 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	PIMREG	Q9BSJ6	248 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	BCO2	Q9BYV7	579 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	ADAMTS10	Q9H324	1103 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	PLEKHF2	Q9H8W4	249 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	NAT8	Q9UHE5	227 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624		V9GY05	133 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	MYO18B	Q8IUG5	2567 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	NKX6-3	A6NJ46	265 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	AP4M1	O00189	453 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	FZD7	O75084	574 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	MRPL33	O75394	65 aa	Known RBP	3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	RRAS	P10301	218 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	CTSA	P10619	480 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	S100A11	P31949	105 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	NKX2-1	P43699	371 aa	Predicted RBP	3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	GPR12	P47775	334 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	RPL30	P62888	115 aa	Known RBP	3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	SFT2D3	Q587I9	215 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	TSEN54	Q7Z6J9	526 aa	Known RBP	3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	BPIFA4P	Q86YQ2	179 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	SLC39A11	Q8N1S5	342 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	ADAMTS18	Q8TE60	1221 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	FAM210B	Q96KR6	192 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	CSAG2	Q9Y5P2	127 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	TNRC6A	Q8NDV7	1962 aa	Known RBP	3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	AKR7A2	O43488	359 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	MSC	O60682	206 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	OPN1MW	P04001	364 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	OPN1MW2	P0DN77	364 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	OPN1MW3	P0DN78	364 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	ELAVL4	P26378	380 aa	Known RBP	3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	BLVRB	P30043	206 aa	Predicted RBP	3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	SIRPA	P78324	504 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	ELOC	Q15369	112 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	SF3B4	Q15427	424 aa	Known RBP eCLIP	3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	PRAMEF5	Q5TYX0	476 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	PRAMEF6	Q5VXH4	476 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	TXNDC8	Q6A555	127 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	BRAT1	Q6PJG6	821 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	OR4S2	Q8NH73	311 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	BCL7C	Q8WUZ0	217 aa	Predicted RBP	3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	FAXDC2	Q96IV6	333 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	TXNIP	Q9H3M7	391 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	GLRX2	Q9NS18	164 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	SPATA6	Q9NWH7	488 aa	Predicted RBP	3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	GDE1	Q9NZC3	331 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	FLRT3	Q9NZU0	649 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	LOC730098	B7Z3J9	87 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	FSCN2	O14926	492 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	COCH	O43405	550 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	IGHV4-34	P06331	123 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	SMIM10L2A	P0DMW4	78 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	SMIM10L2B	P0DMW5	78 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	CD1E	P15812	388 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	TACR2	P21452	398 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	RFX2	P48378	723 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	NDST2	P52849	883 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	WNT7B	P56706	349 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	IRF4	Q15306	451 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624		Q56UQ5	140 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	PIP5KL1	Q5T9C9	394 aa		3.76	□□□□□ -1.81
KCNMA1-223	ENST00000604624	LRRC55	Q6ZSA7	311 aa		3.76	□□□□□ -1.81

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