RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 PPP1R2P9O14990 202 aa4.49□□□□□ -1.69
SPTBN1-206ENST00000602898 YY2O15391 372 aa4.49□□□□□ -1.69
SPTBN1-206ENST00000602898 ZNF749O43361 778 aa4.49□□□□□ -1.69
SPTBN1-206ENST00000602898 RGS11O94810 467 aa4.49□□□□□ -1.69
SPTBN1-206ENST00000602898 NFATC1O95644 943 aa4.49□□□□□ -1.69
SPTBN1-206ENST00000602898 C1QAP02745 245 aa4.49□□□□□ -1.69
SPTBN1-206ENST00000602898 C1GALT1C1LP0DN25 315 aa4.49□□□□□ -1.69
SPTBN1-206ENST00000602898 BCKDHBP21953 392 aa4.49□□□□□ -1.69
SPTBN1-206ENST00000602898 ITGB7P26010 798 aa4.49□□□□□ -1.69
SPTBN1-206ENST00000602898 ELK3P41970 407 aa4.49□□□□□ -1.69
SPTBN1-206ENST00000602898 KCNQ1P51787 676 aa4.49□□□□□ -1.69
SPTBN1-206ENST00000602898 ARHGAP1Q07960 439 aa4.49□□□□□ -1.69
SPTBN1-206ENST00000602898 GTF2H2Q13888 395 aa4.49□□□□□ -1.69
SPTBN1-206ENST00000602898 TIMM50Q3ZCQ8 353 aa4.49□□□□□ -1.69
SPTBN1-206ENST00000602898 UTF1Q5T230 341 aa4.49□□□□□ -1.69
SPTBN1-206ENST00000602898 NSUN5P2Q63ZY6 315 aa4.49□□□□□ -1.69
SPTBN1-206ENST00000602898 GTF2H2CQ6P1K8 395 aa4.49□□□□□ -1.69
SPTBN1-206ENST00000602898 C8orf82Q6P1X6 216 aaPredicted RBP4.49□□□□□ -1.69
SPTBN1-206ENST00000602898 DNAJC24Q6P3W2 148 aa4.49□□□□□ -1.69
SPTBN1-206ENST00000602898 GRINAQ7Z429 371 aa4.49□□□□□ -1.69
SPTBN1-206ENST00000602898 KCNMB4Q86W47 210 aa4.49□□□□□ -1.69
SPTBN1-206ENST00000602898 SYS1Q8N2H4 156 aa4.49□□□□□ -1.69
SPTBN1-206ENST00000602898 EXD3Q8N9H8 876 aa4.49□□□□□ -1.69
SPTBN1-206ENST00000602898 FAM98AQ8NCA5 519 aaKnown RBP4.49□□□□□ -1.69
SPTBN1-206ENST00000602898 BAALCQ8WXS3 180 aa4.49□□□□□ -1.69
SPTBN1-206ENST00000602898 FAM131CQ96AQ9 280 aa4.49□□□□□ -1.69
SPTBN1-206ENST00000602898 TGM7Q96PF1 710 aa4.49□□□□□ -1.69
SPTBN1-206ENST00000602898 URM1Q9BTM9 101 aaKnown RBP4.49□□□□□ -1.69
SPTBN1-206ENST00000602898 OR10A5Q9H207 317 aa4.49□□□□□ -1.69
SPTBN1-206ENST00000602898 CLMPQ9H6B4 373 aa4.49□□□□□ -1.69
SPTBN1-206ENST00000602898 SLC7A11Q9UPY5 501 aa4.49□□□□□ -1.69
SPTBN1-206ENST00000602898 MTCH2Q9Y6C9 303 aa4.49□□□□□ -1.69
SPTBN1-206ENST00000602898 TGIF2-C20orf24A0A0A6YYL0 155 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 A0A1B0GV72 72 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 ANKUB1A6NFN9 424 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 IGLON5A6NGN9 336 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 CXorf49A8MYA2 514 aaPredicted RBP4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 SEC14L6B5MCN3 397 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 USP17L23D6RBM5 183 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 GFYI3L273 518 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 NKX2-8O15522 239 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 OR2T1O43869 369 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 PROSCO94903 275 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 SIX6O95475 246 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 FADS2O95864 444 aaKnown RBP4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 SLC35E2P0CK97 266 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 SULT1A3P0DMM9 295 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 SULT1A4P0DMN0 295 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 SMIM10L1P0DMW3 83 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 CERS1P27544 350 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 NOVA1P51513 510 aaKnown RBP4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 VSX2P58304 361 aaPredicted RBP4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 OR2B8PP59922 312 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 PPP3R1P63098 170 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 ZNF74Q16587 644 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 FAM90A2PQ658T7 463 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 FAM131AQ6UXB0 335 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 ZNF620Q6ZNG0 422 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 TMEM179Q6ZVK1 233 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 ANKRD33Q7Z3H0 272 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 LYG2Q86SG7 212 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 UNC93AQ86WB7 457 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 Q8N402 240 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 GATSQ8NAP1 163 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 TMEM52Q8NDY8 209 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 OR4C6Q8NH72 309 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 GATAD1Q8WUU5 269 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 SORCS1Q8WY21 1168 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 GGHQ92820 318 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 GLYATL1Q969I3 302 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 HIST1H2BAQ96A08 127 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 SMIM10Q96HG1 83 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 SMIM8Q96KF7 97 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 POM121L2Q96KW2 1035 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 HSPA12BQ96MM6 686 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 TMEM56Q96MV1 263 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 VPS25Q9BRG1 176 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 DCAF13Q9NV06 445 aaKnown RBP4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 C2orf42Q9NWW7 574 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 RASL12Q9NYN1 266 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 ZNF223Q9UK11 482 aaPredicted RBP4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 TMEM56-RWDD3S4R434 201 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 TRAV19A0A0A6YYK7 116 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 TRBV11-1A0A0K0K1C0 115 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 hCG_38984A0A1B0GV85 526 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 TPST1O60507 370 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 HSD17B1P14061 328 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 OTX1P32242 354 aaPredicted RBP4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 TNFSF10P50591 281 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 RHOAP61586 193 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 RPL19P84098 196 aaKnown RBP4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 HNRNPA0Q13151 305 aaKnown RBP4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 NKPD1Q17RQ9 610 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 N4BP2L1Q5TBK1 243 aaPredicted RBP4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 HIST2H3PS2Q5TEC6 136 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 WDR25Q64LD2 544 aaPredicted RBP4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 TMEM225Q6GV28 225 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 DPY19L2P2Q6ZN68 376 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 CALHM1Q8IU99 346 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 SPEM1Q8N4L4 309 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms