RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 PER3P56645 1201 aa15.82■□□□□ 0.12
VRK3-225ENST00000601912 PCBD1P61457 104 aa15.82■□□□□ 0.12
VRK3-225ENST00000601912 C1orf185Q5T7R7 199 aa15.82■□□□□ 0.12
VRK3-225ENST00000601912 SYT9Q86SS6 491 aa15.82■□□□□ 0.12
VRK3-225ENST00000601912 SH3GL3Q99963 347 aa15.82■□□□□ 0.12
VRK3-225ENST00000601912 PDCD1LG2Q9BQ51 273 aa15.82■□□□□ 0.12
VRK3-225ENST00000601912 WACQ9BTA9 647 aa15.82■□□□□ 0.12
VRK3-225ENST00000601912 GALNT8Q9NY28 637 aa15.82■□□□□ 0.12
VRK3-225ENST00000601912 MALT1Q9UDY8 824 aa15.82■□□□□ 0.12
VRK3-225ENST00000601912 GTF2A1LQ9UNN4 478 aa15.82■□□□□ 0.12
VRK3-225ENST00000601912 R4GMQ9 66 aa15.82■□□□□ 0.12
VRK3-225ENST00000601912 MED12LQ86YW9 2145 aa15.82■□□□□ 0.12
VRK3-225ENST00000601912 BOD1L1Q8NFC6 3051 aa15.82■□□□□ 0.12
VRK3-225ENST00000601912 PIEZO2Q9H5I5 2752 aa15.82■□□□□ 0.12
VRK3-225ENST00000601912 TMEM269A0A1B0GVZ9 245 aa15.81■□□□□ 0.12
VRK3-225ENST00000601912 MBD3L4A6NDZ8 208 aaPredicted RBP15.81■□□□□ 0.12
VRK3-225ENST00000601912 MBD3L3A6NE82 208 aaPredicted RBP15.81■□□□□ 0.12
VRK3-225ENST00000601912 MBD3L5A6NJ08 208 aaPredicted RBP15.81■□□□□ 0.12
VRK3-225ENST00000601912 PRRG2O14669 202 aa15.81■□□□□ 0.12
VRK3-225ENST00000601912 ZFPL1O95159 310 aa15.81■□□□□ 0.12
VRK3-225ENST00000601912 CD8BP10966 210 aa15.81■□□□□ 0.12
VRK3-225ENST00000601912 GRB2P62993 217 aaKnown RBP15.81■□□□□ 0.12
VRK3-225ENST00000601912 ARF1P84077 181 aaKnown RBP15.81■□□□□ 0.12
VRK3-225ENST00000601912 SCRN3Q0VDG4 424 aa15.81■□□□□ 0.12
VRK3-225ENST00000601912 GUSBP1Q15486 140 aa15.81■□□□□ 0.12
VRK3-225ENST00000601912 DGUOKQ16854 277 aa15.81■□□□□ 0.12
VRK3-225ENST00000601912 YIF1BQ5BJH7 314 aa15.81■□□□□ 0.12
VRK3-225ENST00000601912 PAMR1Q6UXH9 720 aa15.81■□□□□ 0.12
VRK3-225ENST00000601912 GFRALQ6UXV0 394 aa15.81■□□□□ 0.12
VRK3-225ENST00000601912 SLC16A14Q7RTX9 510 aa15.81■□□□□ 0.12
VRK3-225ENST00000601912 CNEP1R1Q8N9A8 125 aa15.81■□□□□ 0.12
VRK3-225ENST00000601912 OR10S1Q8NGN2 331 aa15.81■□□□□ 0.12
VRK3-225ENST00000601912 OR6K3Q8NGY3 331 aa15.81■□□□□ 0.12
VRK3-225ENST00000601912 MBD3L2Q8NHZ7 208 aaPredicted RBP15.81■□□□□ 0.12
VRK3-225ENST00000601912 FBXO17Q96EF6 278 aa15.81■□□□□ 0.12
VRK3-225ENST00000601912 C4orf45Q96LM5 186 aa15.81■□□□□ 0.12
VRK3-225ENST00000601912 PRSS50Q9UI38 385 aa15.81■□□□□ 0.12
VRK3-225ENST00000601912 LOC110117498-PIK3R3F6TDL0 507 aa15.8■□□□□ 0.12
VRK3-225ENST00000601912 MPGP29372 298 aa15.8■□□□□ 0.12
VRK3-225ENST00000601912 HIST1H3AP68431 136 aa15.8■□□□□ 0.12
VRK3-225ENST00000601912 EIF2S3LQ2VIR3 472 aaKnown RBP15.8■□□□□ 0.12
VRK3-225ENST00000601912 ACSM3Q53FZ2 586 aa15.8■□□□□ 0.12
VRK3-225ENST00000601912 HIST2H3PS2Q5TEC6 136 aa15.8■□□□□ 0.12
VRK3-225ENST00000601912 TMEM91Q6ZNR0 172 aa15.8■□□□□ 0.12
VRK3-225ENST00000601912 HIST2H3AQ71DI3 136 aa15.8■□□□□ 0.12
VRK3-225ENST00000601912 ZNF627Q7L945 461 aa15.8■□□□□ 0.12
VRK3-225ENST00000601912 ZNF676Q8N7Q3 588 aa15.8■□□□□ 0.12
VRK3-225ENST00000601912 DYNC2LI1Q8TCX1 351 aa15.8■□□□□ 0.12
VRK3-225ENST00000601912 PNRC2Q9NPJ4 139 aaKnown RBP15.8■□□□□ 0.12
VRK3-225ENST00000601912 ASF1BQ9NVP2 202 aa15.8■□□□□ 0.12
VRK3-225ENST00000601912 PLEK2Q9NYT0 353 aa15.8■□□□□ 0.12
VRK3-225ENST00000601912 FBXL3Q9UKT7 428 aa15.8■□□□□ 0.12
VRK3-225ENST00000601912 ATMQ13315 3056 aa15.8■□□□□ 0.12
VRK3-225ENST00000601912 OR4C45A6NMZ5 311 aa15.79■□□□□ 0.12
VRK3-225ENST00000601912 GATBO75879 557 aaKnown RBP15.79■□□□□ 0.12
VRK3-225ENST00000601912 CRHP06850 196 aa15.79■□□□□ 0.12
VRK3-225ENST00000601912 MMP16P51512 607 aa15.79■□□□□ 0.12
VRK3-225ENST00000601912 WDR38Q5JTN6 314 aa15.79■□□□□ 0.12
VRK3-225ENST00000601912 ELFN2Q5R3F8 820 aa15.79■□□□□ 0.12
VRK3-225ENST00000601912 C9orf135Q5VTT2 229 aa15.79■□□□□ 0.12
VRK3-225ENST00000601912 TFAP2EQ6VUC0 442 aa15.79■□□□□ 0.12
VRK3-225ENST00000601912 CEACAM19Q7Z692 300 aa15.79■□□□□ 0.12
VRK3-225ENST00000601912 CATSPERDQ86XM0 798 aa15.79■□□□□ 0.12
VRK3-225ENST00000601912 PRSS35Q8N3Z0 413 aa15.79■□□□□ 0.12
VRK3-225ENST00000601912 DCLRE1CQ96SD1 692 aaKnown RBP15.79■□□□□ 0.12
VRK3-225ENST00000601912 ATF6BQ99941 703 aa15.79■□□□□ 0.12
VRK3-225ENST00000601912 DDX28Q9NUL7 540 aaKnown RBP15.79■□□□□ 0.12
VRK3-225ENST00000601912 SLC5A6Q9Y289 635 aa15.79■□□□□ 0.12
VRK3-225ENST00000601912 TIMM10BQ9Y5J6 103 aa15.79■□□□□ 0.12
VRK3-225ENST00000601912 CNOT4O95628 575 aaKnown RBP15.79■□□□□ 0.12
VRK3-225ENST00000601912 PNPP00491 289 aa15.79■□□□□ 0.12
VRK3-225ENST00000601912 IL2RAP01589 272 aa15.79■□□□□ 0.12
VRK3-225ENST00000601912 KIR2DL2P43627 348 aaPredicted RBP15.79■□□□□ 0.12
VRK3-225ENST00000601912 RBPJQ06330 500 aa15.79■□□□□ 0.12
VRK3-225ENST00000601912 INSL4Q14641 139 aa15.79■□□□□ 0.12
VRK3-225ENST00000601912 SLC36A2Q495M3 483 aa15.79■□□□□ 0.12
VRK3-225ENST00000601912 FREM1Q5H8C1 2179 aa15.79■□□□□ 0.12
VRK3-225ENST00000601912 RTL6Q6ICC9 239 aa15.79■□□□□ 0.12
VRK3-225ENST00000601912 SKA3Q8IX90 412 aa15.79■□□□□ 0.12
VRK3-225ENST00000601912 PHYHIPQ92561 330 aa15.79■□□□□ 0.12
VRK3-225ENST00000601912 ZFP3Q96NJ6 502 aa15.79■□□□□ 0.12
VRK3-225ENST00000601912 TP63Q9H3D4 680 aaPredicted RBP15.79■□□□□ 0.12
VRK3-225ENST00000601912 OR52A1Q9UKL2 312 aa15.79■□□□□ 0.12
VRK3-225ENST00000601912 NCOA6Q14686 2063 aaPredicted RBP15.79■□□□□ 0.12
VRK3-225ENST00000601912 SGCEO43556 437 aa15.78■□□□□ 0.12
VRK3-225ENST00000601912 SRSF10O75494 262 aaKnown RBP15.78■□□□□ 0.12
VRK3-225ENST00000601912 SC5DO75845 299 aa15.78■□□□□ 0.12
VRK3-225ENST00000601912 TIMP3P35625 211 aa15.78■□□□□ 0.12
VRK3-225ENST00000601912 SOX6P35712 828 aa15.78■□□□□ 0.12
VRK3-225ENST00000601912 KIR3DL2P43630 455 aa15.78■□□□□ 0.12
VRK3-225ENST00000601912 MFGE8Q08431 387 aaPredicted RBP15.78■□□□□ 0.12
VRK3-225ENST00000601912 ECH1Q13011 328 aa15.78■□□□□ 0.12
VRK3-225ENST00000601912 RAB35Q15286 201 aa15.78■□□□□ 0.12
VRK3-225ENST00000601912 CCDC92Q53HC0 331 aaPredicted RBP15.78■□□□□ 0.12
VRK3-225ENST00000601912 BCL2L15Q5TBC7 163 aa15.78■□□□□ 0.12
VRK3-225ENST00000601912 KCNJ15Q99712 375 aa15.78■□□□□ 0.12
VRK3-225ENST00000601912 MED18Q9BUE0 208 aa15.78■□□□□ 0.12
VRK3-225ENST00000601912 HDHD2Q9H0R4 259 aa15.78■□□□□ 0.12
VRK3-225ENST00000601912 MOB1AQ9H8S9 216 aa15.78■□□□□ 0.12
VRK3-225ENST00000601912 FAM215AQ9Y5M1 114 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms