RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 CCDC92Q53HC0 331 aaPredicted RBP15.13■□□□□ 0.01
CHMP2A-208ENST00000601220 OTPQ5XKR4 325 aa15.13■□□□□ 0.01
CHMP2A-208ENST00000601220 CBLL1Q75N03 491 aa15.13■□□□□ 0.01
CHMP2A-208ENST00000601220 DOK3Q7L591 496 aa15.13■□□□□ 0.01
CHMP2A-208ENST00000601220 TREML1Q86YW5 311 aa15.13■□□□□ 0.01
CHMP2A-208ENST00000601220 BCL6BQ8N143 479 aaPredicted RBP15.13■□□□□ 0.01
CHMP2A-208ENST00000601220 SPICQ8N5J4 248 aa15.13■□□□□ 0.01
CHMP2A-208ENST00000601220 OR2Z1Q8NG97 314 aa15.13■□□□□ 0.01
CHMP2A-208ENST00000601220 ITLN1Q8WWA0 313 aa15.13■□□□□ 0.01
CHMP2A-208ENST00000601220 RCN3Q96D15 328 aa15.13■□□□□ 0.01
CHMP2A-208ENST00000601220 GRHPRQ9UBQ7 328 aa15.13■□□□□ 0.01
CHMP2A-208ENST00000601220 ZNF69Q9UC07 566 aa15.13■□□□□ 0.01
CHMP2A-208ENST00000601220 NUP50Q9UKX7 468 aa15.13■□□□□ 0.01
CHMP2A-208ENST00000601220 TANC2Q9HCD6 1990 aa15.13■□□□□ 0.01
CHMP2A-208ENST00000601220 TEX13CA0A0J9YWL9 993 aa15.12■□□□□ 0.01
CHMP2A-208ENST00000601220 HKR1P10072 659 aa15.12■□□□□ 0.01
CHMP2A-208ENST00000601220 TROVE2P10155 538 aaKnown RBP eCLIP15.12■□□□□ 0.01
CHMP2A-208ENST00000601220 TNFRSF1AP19438 455 aa15.12■□□□□ 0.01
CHMP2A-208ENST00000601220 BTG1P62324 171 aa15.12■□□□□ 0.01
CHMP2A-208ENST00000601220 PAX2Q02962 417 aa15.12■□□□□ 0.01
CHMP2A-208ENST00000601220 LIPEQ05469 1076 aa15.12■□□□□ 0.01
CHMP2A-208ENST00000601220 ZNF730Q6ZMV8 503 aa15.12■□□□□ 0.01
CHMP2A-208ENST00000601220 KLHL36Q8N4N3 616 aa15.12■□□□□ 0.01
CHMP2A-208ENST00000601220 PTP4A1Q93096 173 aa15.12■□□□□ 0.01
CHMP2A-208ENST00000601220 ZNF48Q96MX3 618 aaPredicted RBP15.12■□□□□ 0.01
CHMP2A-208ENST00000601220 ZNF747Q9BV97 191 aa15.12■□□□□ 0.01
CHMP2A-208ENST00000601220 C1QTNF5Q9BXJ0 243 aa15.12■□□□□ 0.01
CHMP2A-208ENST00000601220 NMNAT1Q9HAN9 279 aaPredicted RBP15.12■□□□□ 0.01
CHMP2A-208ENST00000601220 DDX28Q9NUL7 540 aaKnown RBP15.12■□□□□ 0.01
CHMP2A-208ENST00000601220 PLEK2Q9NYT0 353 aa15.12■□□□□ 0.01
CHMP2A-208ENST00000601220 AUP1Q9Y679 476 aa15.12■□□□□ 0.01
CHMP2A-208ENST00000601220 TMEM178BH3BS89 294 aa15.11■□□□□ 0.01
CHMP2A-208ENST00000601220 CXCR6O00574 342 aa15.11■□□□□ 0.01
CHMP2A-208ENST00000601220 TNFSF4P23510 183 aa15.11■□□□□ 0.01
CHMP2A-208ENST00000601220 RPL4P36578 427 aaKnown RBP15.11■□□□□ 0.01
CHMP2A-208ENST00000601220 LSM6P62312 80 aaKnown RBP15.11■□□□□ 0.01
CHMP2A-208ENST00000601220 PAX8Q06710 450 aa15.11■□□□□ 0.01
CHMP2A-208ENST00000601220 AQP6Q13520 282 aa15.11■□□□□ 0.01
CHMP2A-208ENST00000601220 IFI44LQ53G44 452 aa15.11■□□□□ 0.01
CHMP2A-208ENST00000601220 C8orf82Q6P1X6 216 aaPredicted RBP15.11■□□□□ 0.01
CHMP2A-208ENST00000601220 POU5F2Q8N7G0 328 aa15.11■□□□□ 0.01
CHMP2A-208ENST00000601220 SLC7A13Q8TCU3 470 aa15.11■□□□□ 0.01
CHMP2A-208ENST00000601220 RASD2Q96D21 266 aa15.11■□□□□ 0.01
CHMP2A-208ENST00000601220 HSH2DQ96JZ2 352 aa15.11■□□□□ 0.01
CHMP2A-208ENST00000601220 GCM1Q9NP62 436 aa15.11■□□□□ 0.01
CHMP2A-208ENST00000601220 NRIP3Q9NQ35 241 aa15.11■□□□□ 0.01
CHMP2A-208ENST00000601220 VSX1Q9NZR4 365 aaPredicted RBP15.11■□□□□ 0.01
CHMP2A-208ENST00000601220 ARMCX1Q9P291 453 aa15.11■□□□□ 0.01
CHMP2A-208ENST00000601220 ASH2LQ9UBL3 628 aa15.11■□□□□ 0.01
CHMP2A-208ENST00000601220 PPP1R3CQ9UQK1 317 aa15.11■□□□□ 0.01
CHMP2A-208ENST00000601220 SIGLEC7Q9Y286 467 aa15.11■□□□□ 0.01
CHMP2A-208ENST00000601220 AP3M1Q9Y2T2 418 aa15.11■□□□□ 0.01
CHMP2A-208ENST00000601220 PCDHGB1Q9Y5G3 927 aa15.11■□□□□ 0.01
CHMP2A-208ENST00000601220 CAPN7Q9Y6W3 813 aa15.11■□□□□ 0.01
CHMP2A-208ENST00000601220 NME4O00746 187 aa15.1■□□□□ 0.01
CHMP2A-208ENST00000601220 SLC22A2O15244 555 aa15.1■□□□□ 0.01
CHMP2A-208ENST00000601220 ZNF682O95780 498 aa15.1■□□□□ 0.01
CHMP2A-208ENST00000601220 DBHP09172 617 aa15.1■□□□□ 0.01
CHMP2A-208ENST00000601220 WNT2P09544 360 aa15.1■□□□□ 0.01
CHMP2A-208ENST00000601220 RAC2P15153 192 aa15.1■□□□□ 0.01
CHMP2A-208ENST00000601220 PRTN3P24158 256 aa15.1■□□□□ 0.01
CHMP2A-208ENST00000601220 CD80P33681 288 aa15.1■□□□□ 0.01
CHMP2A-208ENST00000601220 MMP16P51512 607 aa15.1■□□□□ 0.01
CHMP2A-208ENST00000601220 FXYD6P3P58550 94 aa15.1■□□□□ 0.01
CHMP2A-208ENST00000601220 HIST1H3AP68431 136 aa15.1■□□□□ 0.01
CHMP2A-208ENST00000601220 HLXQ14774 488 aaPredicted RBP15.1■□□□□ 0.01
CHMP2A-208ENST00000601220 KCNMB1Q16558 191 aa15.1■□□□□ 0.01
CHMP2A-208ENST00000601220 PRR31Q5SQ13 230 aa15.1■□□□□ 0.01
CHMP2A-208ENST00000601220 HIST2H3PS2Q5TEC6 136 aa15.1■□□□□ 0.01
CHMP2A-208ENST00000601220 FBXW12Q6X9E4 464 aa15.1■□□□□ 0.01
CHMP2A-208ENST00000601220 HIST2H3AQ71DI3 136 aa15.1■□□□□ 0.01
CHMP2A-208ENST00000601220 OR1F12Q8NHA8 337 aa15.1■□□□□ 0.01
CHMP2A-208ENST00000601220 DACT3Q96B18 629 aaPredicted RBP15.1■□□□□ 0.01
CHMP2A-208ENST00000601220 ZNF570Q96NI8 536 aa15.1■□□□□ 0.01
CHMP2A-208ENST00000601220 OR2V2Q96R30 315 aa15.1■□□□□ 0.01
CHMP2A-208ENST00000601220 GPX7Q96SL4 187 aaPredicted RBP15.1■□□□□ 0.01
CHMP2A-208ENST00000601220 SYT4Q9H2B2 425 aa15.1■□□□□ 0.01
CHMP2A-208ENST00000601220 ANKRD19PQ9H560 264 aa15.1■□□□□ 0.01
CHMP2A-208ENST00000601220 TMEM165Q9HC07 324 aa15.1■□□□□ 0.01
CHMP2A-208ENST00000601220 COA3Q9Y2R0 106 aaPredicted RBP15.1■□□□□ 0.01
CHMP2A-208ENST00000601220 DNAJC9-AS1A6NH13 148 aa15.09■□□□□ 0.01
CHMP2A-208ENST00000601220 CEACAM18A8MTB9 384 aa15.09■□□□□ 0.01
CHMP2A-208ENST00000601220 J3QW42 95 aa15.09■□□□□ 0.01
CHMP2A-208ENST00000601220 XKRYO14609 159 aa15.09■□□□□ 0.01
CHMP2A-208ENST00000601220 RER1O15258 196 aa15.09■□□□□ 0.01
CHMP2A-208ENST00000601220 TMPRSS2O15393 492 aa15.09■□□□□ 0.01
CHMP2A-208ENST00000601220 SLC16A7O60669 478 aa15.09■□□□□ 0.01
CHMP2A-208ENST00000601220 SERPINA1P01009 418 aa15.09■□□□□ 0.01
CHMP2A-208ENST00000601220 MDH2P40926 338 aaKnown RBP15.09■□□□□ 0.01
CHMP2A-208ENST00000601220 GUCY1A3Q02108 690 aa15.09■□□□□ 0.01
CHMP2A-208ENST00000601220 FOXL1Q12952 345 aa15.09■□□□□ 0.01
CHMP2A-208ENST00000601220 KRR1Q13601 381 aaKnown RBP15.09■□□□□ 0.01
CHMP2A-208ENST00000601220 RSPO1Q2MKA7 263 aaPredicted RBP15.09■□□□□ 0.01
CHMP2A-208ENST00000601220 C1orf94Q6P1W5 598 aa15.09■□□□□ 0.01
CHMP2A-208ENST00000601220 PTCHD4Q6ZW05 846 aa15.09■□□□□ 0.01
CHMP2A-208ENST00000601220 ARPINQ7Z6K5 226 aa15.09■□□□□ 0.01
CHMP2A-208ENST00000601220 GLB1L2Q8IW92 636 aa15.09■□□□□ 0.01
CHMP2A-208ENST00000601220 RP9Q8TA86 221 aaKnown RBP15.09■□□□□ 0.01
CHMP2A-208ENST00000601220 FAM46AQ96IP4 442 aaKnown RBP15.09■□□□□ 0.01
CHMP2A-208ENST00000601220 COG8Q96MW5 612 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms