RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 ZNF718Q3SXZ3 478 aa14.46□□□□□ -0.09
TRIM28-215ENST00000601150 FAHD1Q6P587 224 aa14.46□□□□□ -0.09
TRIM28-215ENST00000601150 CORO6Q6QEF8 472 aa14.46□□□□□ -0.09
TRIM28-215ENST00000601150 RFPL4BQ6ZWI9 263 aa14.46□□□□□ -0.09
TRIM28-215ENST00000601150 ZNF525Q8N782 197 aa14.46□□□□□ -0.09
TRIM28-215ENST00000601150 OR2AJ1Q8NGZ0 328 aa14.46□□□□□ -0.09
TRIM28-215ENST00000601150 ABHD4Q8TB40 342 aa14.46□□□□□ -0.09
TRIM28-215ENST00000601150 NEU4Q8WWR8 484 aaPredicted RBP14.46□□□□□ -0.09
TRIM28-215ENST00000601150 NMNAT2Q9BZQ4 307 aa14.46□□□□□ -0.09
TRIM28-215ENST00000601150 HDHD2Q9H0R4 259 aa14.46□□□□□ -0.09
TRIM28-215ENST00000601150 MS4A5Q9H3V2 200 aa14.46□□□□□ -0.09
TRIM28-215ENST00000601150 PAPOLBQ9NRJ5 636 aaKnown RBP14.46□□□□□ -0.09
TRIM28-215ENST00000601150 MRPL22Q9NWU5 206 aaKnown RBP14.46□□□□□ -0.09
TRIM28-215ENST00000601150 MYEF2Q9P2K5 600 aaKnown RBP14.46□□□□□ -0.09
TRIM28-215ENST00000601150 GPR160Q9UJ42 338 aa14.46□□□□□ -0.09
TRIM28-215ENST00000601150 IGLV3-9A0A075B6K5 115 aa14.45□□□□□ -0.1
TRIM28-215ENST00000601150 G3V2T6 193 aa14.45□□□□□ -0.1
TRIM28-215ENST00000601150 SMAD7O15105 426 aaKnown RBP14.45□□□□□ -0.1
TRIM28-215ENST00000601150 ABHD16AO95870 558 aa14.45□□□□□ -0.1
TRIM28-215ENST00000601150 CLPTM1O96005 669 aa14.45□□□□□ -0.1
TRIM28-215ENST00000601150 NGFP01138 241 aa14.45□□□□□ -0.1
TRIM28-215ENST00000601150 HMGN1P05114 100 aa14.45□□□□□ -0.1
TRIM28-215ENST00000601150 CR1P17927 2039 aa14.45□□□□□ -0.1
TRIM28-215ENST00000601150 SPI1P17947 270 aa14.45□□□□□ -0.1
TRIM28-215ENST00000601150 GGT2P36268 569 aa14.45□□□□□ -0.1
TRIM28-215ENST00000601150 ALDH3B1P43353 468 aa14.45□□□□□ -0.1
TRIM28-215ENST00000601150 CDK5Q00535 292 aa14.45□□□□□ -0.1
TRIM28-215ENST00000601150 ELFN2Q5R3F8 820 aa14.45□□□□□ -0.1
TRIM28-215ENST00000601150 SLC18B1Q6NT16 456 aa14.45□□□□□ -0.1
TRIM28-215ENST00000601150 ACSM5Q6NUN0 579 aa14.45□□□□□ -0.1
TRIM28-215ENST00000601150 AMIGO2Q86SJ2 522 aa14.45□□□□□ -0.1
TRIM28-215ENST00000601150 BIVMQ86UB2 503 aa14.45□□□□□ -0.1
TRIM28-215ENST00000601150 LINC00346Q8IVM7 164 aa14.45□□□□□ -0.1
TRIM28-215ENST00000601150 ZCCHC24Q8N2G6 241 aaKnown RBP14.45□□□□□ -0.1
TRIM28-215ENST00000601150 OR51L1Q8NGJ5 315 aa14.45□□□□□ -0.1
TRIM28-215ENST00000601150 ZNRF4Q8WWF5 429 aa14.45□□□□□ -0.1
TRIM28-215ENST00000601150 LRTOMTQ8WZ04 291 aa14.45□□□□□ -0.1
TRIM28-215ENST00000601150 FAM168AQ92567 244 aa14.45□□□□□ -0.1
TRIM28-215ENST00000601150 REG4Q9BYZ8 158 aa14.45□□□□□ -0.1
TRIM28-215ENST00000601150 MYOZ1Q9NP98 299 aaPredicted RBP14.45□□□□□ -0.1
TRIM28-215ENST00000601150 TBCCD1Q9NVR7 557 aa14.45□□□□□ -0.1
TRIM28-215ENST00000601150 SLCO1C1Q9NYB5 712 aa14.45□□□□□ -0.1
TRIM28-215ENST00000601150 TAAR3PQ9P1P4 343 aa14.45□□□□□ -0.1
TRIM28-215ENST00000601150 CYB5R1Q9UHQ9 305 aa14.45□□□□□ -0.1
TRIM28-215ENST00000601150 TVP23AA6NH52 213 aa14.44□□□□□ -0.1
TRIM28-215ENST00000601150 RNF223E7ERA6 249 aa14.44□□□□□ -0.1
TRIM28-215ENST00000601150 H3BSA7 217 aa14.44□□□□□ -0.1
TRIM28-215ENST00000601150 GYPBP06028 91 aa14.44□□□□□ -0.1
TRIM28-215ENST00000601150 ZNF23P17027 643 aa14.44□□□□□ -0.1
TRIM28-215ENST00000601150 PAICSP22234 425 aaKnown RBP14.44□□□□□ -0.1
TRIM28-215ENST00000601150 GCH1P30793 250 aa14.44□□□□□ -0.1
TRIM28-215ENST00000601150 FMO3P31513 532 aa14.44□□□□□ -0.1
TRIM28-215ENST00000601150 PDLIM4P50479 330 aa14.44□□□□□ -0.1
TRIM28-215ENST00000601150 DAPP51397 102 aa14.44□□□□□ -0.1
TRIM28-215ENST00000601150 BLVRAP53004 296 aa14.44□□□□□ -0.1
TRIM28-215ENST00000601150 ACTR3P61158 418 aa14.44□□□□□ -0.1
TRIM28-215ENST00000601150 KPNB1Q14974 876 aaKnown RBP14.44□□□□□ -0.1
TRIM28-215ENST00000601150 MOGQ16653 247 aa14.44□□□□□ -0.1
TRIM28-215ENST00000601150 NKPD1Q17RQ9 610 aa14.44□□□□□ -0.1
TRIM28-215ENST00000601150 SPATA46Q5T0L3 261 aa14.44□□□□□ -0.1
TRIM28-215ENST00000601150 CFAP77Q6ZQR2 320 aa14.44□□□□□ -0.1
TRIM28-215ENST00000601150 ZDHHC13Q8IUH4 622 aa14.44□□□□□ -0.1
TRIM28-215ENST00000601150 PARP8Q8N3A8 854 aa14.44□□□□□ -0.1
TRIM28-215ENST00000601150 SLC25A40Q8TBP6 338 aa14.44□□□□□ -0.1
TRIM28-215ENST00000601150 SLC7A6Q92536 515 aa14.44□□□□□ -0.1
TRIM28-215ENST00000601150 OTULINQ96BN8 352 aa14.44□□□□□ -0.1
TRIM28-215ENST00000601150 MARS2Q96GW9 593 aaKnown RBP14.44□□□□□ -0.1
TRIM28-215ENST00000601150 DCLRE1CQ96SD1 692 aaKnown RBP14.44□□□□□ -0.1
TRIM28-215ENST00000601150 COQ7Q99807 217 aa14.44□□□□□ -0.1
TRIM28-215ENST00000601150 TEX12Q9BXU0 123 aa14.44□□□□□ -0.1
TRIM28-215ENST00000601150 OR2J1Q9GZK6 312 aa14.44□□□□□ -0.1
TRIM28-215ENST00000601150 TPK1Q9H3S4 243 aa14.44□□□□□ -0.1
TRIM28-215ENST00000601150 SLC25A19Q9HC21 320 aa14.44□□□□□ -0.1
TRIM28-215ENST00000601150 GRIP1Q9Y3R0 1128 aa14.44□□□□□ -0.1
TRIM28-215ENST00000601150 IGHV4-30-2A0A087WSY4 118 aa14.43□□□□□ -0.1
TRIM28-215ENST00000601150 FAM183AA6NL82 134 aa14.43□□□□□ -0.1
TRIM28-215ENST00000601150 SURF4O15260 269 aa14.43□□□□□ -0.1
TRIM28-215ENST00000601150 IGHV3-13P01766 116 aa14.43□□□□□ -0.1
TRIM28-215ENST00000601150 CLUP10909 449 aa14.43□□□□□ -0.1
TRIM28-215ENST00000601150 TUBG1P23258 451 aa14.43□□□□□ -0.1
TRIM28-215ENST00000601150 ECH1Q13011 328 aa14.43□□□□□ -0.1
TRIM28-215ENST00000601150 MBNL2Q5VZF2 373 aaKnown RBP14.43□□□□□ -0.1
TRIM28-215ENST00000601150 OR6K6Q8NGW6 343 aa14.43□□□□□ -0.1
TRIM28-215ENST00000601150 KLF14Q8TD94 323 aaPredicted RBP14.43□□□□□ -0.1
TRIM28-215ENST00000601150 C10orf105Q8TEF2 133 aa14.43□□□□□ -0.1
TRIM28-215ENST00000601150 SNX33Q8WV41 574 aa14.43□□□□□ -0.1
TRIM28-215ENST00000601150 IPCEF1Q8WWN9 437 aaPredicted RBP14.43□□□□□ -0.1
TRIM28-215ENST00000601150 PYDC1Q8WXC3 89 aa14.43□□□□□ -0.1
TRIM28-215ENST00000601150 CENPNQ96H22 339 aaPredicted RBP14.43□□□□□ -0.1
TRIM28-215ENST00000601150 COG8Q96MW5 612 aa14.43□□□□□ -0.1
TRIM28-215ENST00000601150 PITX2Q99697 317 aa14.43□□□□□ -0.1
TRIM28-215ENST00000601150 GABARAPL1Q9H0R8 117 aa14.43□□□□□ -0.1
TRIM28-215ENST00000601150 MED20Q9H944 212 aa14.43□□□□□ -0.1
TRIM28-215ENST00000601150 TUBG2Q9NRH3 451 aa14.43□□□□□ -0.1
TRIM28-215ENST00000601150 KRT84Q9NSB2 600 aa14.43□□□□□ -0.1
TRIM28-215ENST00000601150 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.43□□□□□ -0.1
TRIM28-215ENST00000601150 COMMD3-BMI1R4GMX3 469 aa14.43□□□□□ -0.1
TRIM28-215ENST00000601150 VPS13CQ709C8 3753 aa14.42□□□□□ -0.1
TRIM28-215ENST00000601150 PRR23D1E9PI22 279 aaPredicted RBP14.42□□□□□ -0.1
TRIM28-215ENST00000601150 NDUFS8O00217 210 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms