RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 TEKQ02763 1124 aa13.87□□□□□ -0.19
LSM4-206ENST00000600289 CCDC92Q53HC0 331 aaPredicted RBP13.87□□□□□ -0.19
LSM4-206ENST00000600289 ARL9Q6T311 187 aa13.87□□□□□ -0.19
LSM4-206ENST00000600289 LRP11Q86VZ4 500 aa13.87□□□□□ -0.19
LSM4-206ENST00000600289 OR1J1Q8NGS3 322 aa13.87□□□□□ -0.19
LSM4-206ENST00000600289 SYNPRQ8TBG9 265 aa13.87□□□□□ -0.19
LSM4-206ENST00000600289 DCLRE1CQ96SD1 692 aaKnown RBP13.87□□□□□ -0.19
LSM4-206ENST00000600289 COQ7Q99807 217 aa13.87□□□□□ -0.19
LSM4-206ENST00000600289 VRK1Q99986 396 aaPredicted RBP13.87□□□□□ -0.19
LSM4-206ENST00000600289 RHNO1Q9BSD3 238 aa13.87□□□□□ -0.19
LSM4-206ENST00000600289 HDHD2Q9H0R4 259 aa13.87□□□□□ -0.19
LSM4-206ENST00000600289 FN3KQ9H479 309 aa13.87□□□□□ -0.19
LSM4-206ENST00000600289 ZNF556Q9HAH1 456 aa13.87□□□□□ -0.19
LSM4-206ENST00000600289 ELOVL3Q9HB03 270 aa13.87□□□□□ -0.19
LSM4-206ENST00000600289 DYNLRB1Q9NP97 96 aa13.87□□□□□ -0.19
LSM4-206ENST00000600289 TBCCD1Q9NVR7 557 aa13.87□□□□□ -0.19
LSM4-206ENST00000600289 PLEK2Q9NYT0 353 aa13.87□□□□□ -0.19
LSM4-206ENST00000600289 CYB5R1Q9UHQ9 305 aa13.87□□□□□ -0.19
LSM4-206ENST00000600289 TANC2Q9HCD6 1990 aa13.87□□□□□ -0.19
LSM4-206ENST00000600289 H3BN98 237 aa13.86□□□□□ -0.19
LSM4-206ENST00000600289 GPANK1O95872 356 aa13.86□□□□□ -0.19
LSM4-206ENST00000600289 IGHV3-13P01766 116 aa13.86□□□□□ -0.19
LSM4-206ENST00000600289 LCKP06239 509 aa13.86□□□□□ -0.19
LSM4-206ENST00000600289 SLC25A16P16260 332 aa13.86□□□□□ -0.19
LSM4-206ENST00000600289 CCNOP22674 350 aa13.86□□□□□ -0.19
LSM4-206ENST00000600289 GGT2P36268 569 aa13.86□□□□□ -0.19
LSM4-206ENST00000600289 HTR5AP47898 357 aa13.86□□□□□ -0.19
LSM4-206ENST00000600289 SELENOVP59797 346 aa13.86□□□□□ -0.19
LSM4-206ENST00000600289 ERVS71-1P61550 626 aa13.86□□□□□ -0.19
LSM4-206ENST00000600289 PPP2R2BQ00005 443 aa13.86□□□□□ -0.19
LSM4-206ENST00000600289 CRMP1Q14194 572 aa13.86□□□□□ -0.19
LSM4-206ENST00000600289 MBNL2Q5VZF2 373 aaKnown RBP13.86□□□□□ -0.19
LSM4-206ENST00000600289 SLC18B1Q6NT16 456 aa13.86□□□□□ -0.19
LSM4-206ENST00000600289 SLC27A4Q6P1M0 643 aa13.86□□□□□ -0.19
LSM4-206ENST00000600289 FAHD1Q6P587 224 aa13.86□□□□□ -0.19
LSM4-206ENST00000600289 RFPL4BQ6ZWI9 263 aa13.86□□□□□ -0.19
LSM4-206ENST00000600289 HS3ST5Q8IZT8 346 aa13.86□□□□□ -0.19
LSM4-206ENST00000600289 ZNF525Q8N782 197 aa13.86□□□□□ -0.19
LSM4-206ENST00000600289 OR1F12Q8NHA8 337 aa13.86□□□□□ -0.19
LSM4-206ENST00000600289 OR5K1Q8NHB7 308 aa13.86□□□□□ -0.19
LSM4-206ENST00000600289 C10orf105Q8TEF2 133 aa13.86□□□□□ -0.19
LSM4-206ENST00000600289 MARS2Q96GW9 593 aaKnown RBP13.86□□□□□ -0.19
LSM4-206ENST00000600289 C4orf45Q96LM5 186 aa13.86□□□□□ -0.19
LSM4-206ENST00000600289 SYT3Q9BQG1 590 aa13.86□□□□□ -0.19
LSM4-206ENST00000600289 REG4Q9BYZ8 158 aa13.86□□□□□ -0.19
LSM4-206ENST00000600289 MRPL22Q9NWU5 206 aaKnown RBP13.86□□□□□ -0.19
LSM4-206ENST00000600289 SLCO1C1Q9NYB5 712 aa13.86□□□□□ -0.19
LSM4-206ENST00000600289 MYEF2Q9P2K5 600 aaKnown RBP13.86□□□□□ -0.19
LSM4-206ENST00000600289 GPR160Q9UJ42 338 aa13.86□□□□□ -0.19
LSM4-206ENST00000600289 POLR1DQ9Y2S0 133 aa13.86□□□□□ -0.19
LSM4-206ENST00000600289 AP4S1Q9Y587 144 aa13.86□□□□□ -0.19
LSM4-206ENST00000600289 IGHV4-30-2A0A087WSY4 118 aa13.85□□□□□ -0.19
LSM4-206ENST00000600289 A0A096LNT2 108 aa13.85□□□□□ -0.19
LSM4-206ENST00000600289 RIIAD1A6NNX1 92 aa13.85□□□□□ -0.19
LSM4-206ENST00000600289 VWC2LB2RUY7 222 aa13.85□□□□□ -0.19
LSM4-206ENST00000600289 EBAG9O00559 213 aa13.85□□□□□ -0.19
LSM4-206ENST00000600289 RER1O15258 196 aa13.85□□□□□ -0.19
LSM4-206ENST00000600289 ADRA2AP08913 450 aa13.85□□□□□ -0.19
LSM4-206ENST00000600289 ZNF3P17036 446 aa13.85□□□□□ -0.19
LSM4-206ENST00000600289 FASP25445 335 aa13.85□□□□□ -0.19
LSM4-206ENST00000600289 CENPAP49450 140 aa13.85□□□□□ -0.19
LSM4-206ENST00000600289 PDLIM4P50479 330 aa13.85□□□□□ -0.19
LSM4-206ENST00000600289 ERFP50548 548 aa13.85□□□□□ -0.19
LSM4-206ENST00000600289 BLVRAP53004 296 aa13.85□□□□□ -0.19
LSM4-206ENST00000600289 CDK5Q00535 292 aa13.85□□□□□ -0.19
LSM4-206ENST00000600289 MOGQ16653 247 aa13.85□□□□□ -0.19
LSM4-206ENST00000600289 MEP1BQ16820 701 aa13.85□□□□□ -0.19
LSM4-206ENST00000600289 KRTAP27-1Q3LI81 207 aa13.85□□□□□ -0.19
LSM4-206ENST00000600289 ZNF718Q3SXZ3 478 aa13.85□□□□□ -0.19
LSM4-206ENST00000600289 ELFN2Q5R3F8 820 aa13.85□□□□□ -0.19
LSM4-206ENST00000600289 HIPK1Q86Z02 1210 aa13.85□□□□□ -0.19
LSM4-206ENST00000600289 PARP8Q8N3A8 854 aa13.85□□□□□ -0.19
LSM4-206ENST00000600289 CYB561A3Q8NBI2 242 aa13.85□□□□□ -0.19
LSM4-206ENST00000600289 PROKR2Q8NFJ6 384 aa13.85□□□□□ -0.19
LSM4-206ENST00000600289 FAM168AQ92567 244 aa13.85□□□□□ -0.19
LSM4-206ENST00000600289 COG8Q96MW5 612 aa13.85□□□□□ -0.19
LSM4-206ENST00000600289 GABARAPL1Q9H0R8 117 aa13.85□□□□□ -0.19
LSM4-206ENST00000600289 OR51B6Q9H340 312 aa13.85□□□□□ -0.19
LSM4-206ENST00000600289 SLC25A19Q9HC21 320 aa13.85□□□□□ -0.19
LSM4-206ENST00000600289 CGGBP1Q9UFW8 167 aaPredicted RBP13.85□□□□□ -0.19
LSM4-206ENST00000600289 DUSP13Q9UII6 198 aa13.85□□□□□ -0.19
LSM4-206ENST00000600289 A0A1W2PPW3 197 aa13.84□□□□□ -0.19
LSM4-206ENST00000600289 LOC390937A0A1W2PQ73 354 aa13.84□□□□□ -0.19
LSM4-206ENST00000600289 RNF223E7ERA6 249 aa13.84□□□□□ -0.19
LSM4-206ENST00000600289 ABHD16AO95870 558 aa13.84□□□□□ -0.19
LSM4-206ENST00000600289 CLPTM1O96005 669 aa13.84□□□□□ -0.19
LSM4-206ENST00000600289 SPI1P17947 270 aa13.84□□□□□ -0.19
LSM4-206ENST00000600289 RGS6P49758 472 aa13.84□□□□□ -0.19
LSM4-206ENST00000600289 ACTR3P61158 418 aa13.84□□□□□ -0.19
LSM4-206ENST00000600289 PPP1CBP62140 327 aa13.84□□□□□ -0.19
LSM4-206ENST00000600289 ECH1Q13011 328 aa13.84□□□□□ -0.19
LSM4-206ENST00000600289 PCK2Q16822 640 aa13.84□□□□□ -0.19
LSM4-206ENST00000600289 TEX30Q5JUR7 227 aa13.84□□□□□ -0.19
LSM4-206ENST00000600289 OTPQ5XKR4 325 aa13.84□□□□□ -0.19
LSM4-206ENST00000600289 ATG16L2Q8NAA4 619 aa13.84□□□□□ -0.19
LSM4-206ENST00000600289 ABHD4Q8TB40 342 aa13.84□□□□□ -0.19
LSM4-206ENST00000600289 SLC25A40Q8TBP6 338 aa13.84□□□□□ -0.19
LSM4-206ENST00000600289 ZNRF4Q8WWF5 429 aa13.84□□□□□ -0.19
LSM4-206ENST00000600289 FZR1Q9UM11 496 aa13.84□□□□□ -0.19
LSM4-206ENST00000600289 LY6HO94772 140 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms