RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 NUAK2Q9H093 628 aa13.41□□□□□ -0.26
VRK3-221ENST00000600284 LPAR2Q9HBW0 351 aa13.41□□□□□ -0.26
VRK3-221ENST00000600284 CD300AQ9UGN4 299 aa13.41□□□□□ -0.26
VRK3-221ENST00000600284 OR6C6A6NF89 314 aa13.4□□□□□ -0.26
VRK3-221ENST00000600284 SOCS2O14508 198 aa13.4□□□□□ -0.26
VRK3-221ENST00000600284 ARPC3O15145 178 aa13.4□□□□□ -0.26
VRK3-221ENST00000600284 TIMM8AO60220 97 aaPredicted RBP13.4□□□□□ -0.26
VRK3-221ENST00000600284 DIRAS1O95057 198 aa13.4□□□□□ -0.26
VRK3-221ENST00000600284 GADD45GO95257 159 aa13.4□□□□□ -0.26
VRK3-221ENST00000600284 PNPP00491 289 aa13.4□□□□□ -0.26
VRK3-221ENST00000600284 IGHV2-5P01817 119 aa13.4□□□□□ -0.26
VRK3-221ENST00000600284 TNFSF4P23510 183 aa13.4□□□□□ -0.26
VRK3-221ENST00000600284 CDKN2AP42771 156 aaKnown RBP13.4□□□□□ -0.26
VRK3-221ENST00000600284 RGS6P49758 472 aa13.4□□□□□ -0.26
VRK3-221ENST00000600284 RFX4Q33E94 735 aa13.4□□□□□ -0.26
VRK3-221ENST00000600284 PTCHD4Q6ZW05 846 aa13.4□□□□□ -0.26
VRK3-221ENST00000600284 OR1F12Q8NHA8 337 aa13.4□□□□□ -0.26
VRK3-221ENST00000600284 PTP4A1Q93096 173 aa13.4□□□□□ -0.26
VRK3-221ENST00000600284 MCUR1Q96AQ8 359 aa13.4□□□□□ -0.26
VRK3-221ENST00000600284 HAVCR1Q96D42 359 aa13.4□□□□□ -0.26
VRK3-221ENST00000600284 SAMD8Q96LT4 415 aa13.4□□□□□ -0.26
VRK3-221ENST00000600284 GPA33Q99795 319 aa13.4□□□□□ -0.26
VRK3-221ENST00000600284 G6PC2Q9NQR9 355 aa13.4□□□□□ -0.26
VRK3-221ENST00000600284 NDE1Q9NXR1 346 aa13.4□□□□□ -0.26
VRK3-221ENST00000600284 ASH2LQ9UBL3 628 aa13.4□□□□□ -0.26
VRK3-221ENST00000600284 IL20RAQ9UHF4 553 aa13.4□□□□□ -0.26
VRK3-221ENST00000600284 TAGLN3Q9UI15 199 aa13.4□□□□□ -0.26
VRK3-221ENST00000600284 PURGQ9UJV8 347 aaKnown RBP13.4□□□□□ -0.26
VRK3-221ENST00000600284 STARD10Q9Y365 291 aa13.4□□□□□ -0.26
VRK3-221ENST00000600284 CACNG2Q9Y698 323 aa13.4□□□□□ -0.26
VRK3-221ENST00000600284 FBN3Q75N90 2809 aa13.39□□□□□ -0.27
VRK3-221ENST00000600284 PLPP2O43688 288 aa13.39□□□□□ -0.27
VRK3-221ENST00000600284 MPZL1O95297 269 aa13.39□□□□□ -0.27
VRK3-221ENST00000600284 TNFRSF1AP19438 455 aa13.39□□□□□ -0.27
VRK3-221ENST00000600284 GATA3P23771 443 aa13.39□□□□□ -0.27
VRK3-221ENST00000600284 FPR3P25089 353 aa13.39□□□□□ -0.27
VRK3-221ENST00000600284 SLC6A6P31641 620 aa13.39□□□□□ -0.27
VRK3-221ENST00000600284 IFNGR2P38484 337 aa13.39□□□□□ -0.27
VRK3-221ENST00000600284 HIST1H3AP68431 136 aa13.39□□□□□ -0.27
VRK3-221ENST00000600284 TNFAIP6P98066 277 aaPredicted RBP13.39□□□□□ -0.27
VRK3-221ENST00000600284 CCDC92Q53HC0 331 aaPredicted RBP13.39□□□□□ -0.27
VRK3-221ENST00000600284 HIST2H3PS2Q5TEC6 136 aa13.39□□□□□ -0.27
VRK3-221ENST00000600284 FAHD2BQ6P2I3 314 aaPredicted RBP13.39□□□□□ -0.27
VRK3-221ENST00000600284 HIST2H3AQ71DI3 136 aa13.39□□□□□ -0.27
VRK3-221ENST00000600284 GJC3Q8NFK1 279 aa13.39□□□□□ -0.27
VRK3-221ENST00000600284 CMBLQ96DG6 245 aa13.39□□□□□ -0.27
VRK3-221ENST00000600284 FAHD2AQ96GK7 314 aa13.39□□□□□ -0.27
VRK3-221ENST00000600284 NSMCE2Q96MF7 247 aa13.39□□□□□ -0.27
VRK3-221ENST00000600284 CDRT15Q96T59 188 aa13.39□□□□□ -0.27
VRK3-221ENST00000600284 RERGLQ9H628 205 aa13.39□□□□□ -0.27
VRK3-221ENST00000600284 METTL17Q9H7H0 456 aaPredicted RBP13.39□□□□□ -0.27
VRK3-221ENST00000600284 MSL2Q9HCI7 577 aa13.39□□□□□ -0.27
VRK3-221ENST00000600284 IL1RAPQ9NPH3 570 aa13.39□□□□□ -0.27
VRK3-221ENST00000600284 ARL2BPQ9Y2Y0 163 aa13.39□□□□□ -0.27
VRK3-221ENST00000600284 A0A0G2JMP0 313 aa13.38□□□□□ -0.27
VRK3-221ENST00000600284 A0A0X1KG70 313 aa13.38□□□□□ -0.27
VRK3-221ENST00000600284 J3QLI3 93 aa13.38□□□□□ -0.27
VRK3-221ENST00000600284 SURF4O15260 269 aa13.38□□□□□ -0.27
VRK3-221ENST00000600284 IDH3BO43837 385 aa13.38□□□□□ -0.27
VRK3-221ENST00000600284 FABP3P05413 133 aa13.38□□□□□ -0.27
VRK3-221ENST00000600284 RAC2P15153 192 aa13.38□□□□□ -0.27
VRK3-221ENST00000600284 SPIBQ01892 262 aa13.38□□□□□ -0.27
VRK3-221ENST00000600284 SHQ1Q6PI26 577 aaKnown RBP13.38□□□□□ -0.27
VRK3-221ENST00000600284 C16orf89Q6UX73 402 aa13.38□□□□□ -0.27
VRK3-221ENST00000600284 PIGWQ7Z7B1 504 aa13.38□□□□□ -0.27
VRK3-221ENST00000600284 JAZF1Q86VZ6 243 aa13.38□□□□□ -0.27
VRK3-221ENST00000600284 OR4M2Q8NGB6 313 aa13.38□□□□□ -0.27
VRK3-221ENST00000600284 OR5L1Q8NGL2 311 aa13.38□□□□□ -0.27
VRK3-221ENST00000600284 FANK1Q8TC84 345 aa13.38□□□□□ -0.27
VRK3-221ENST00000600284 ERMAPQ96PL5 475 aaPredicted RBP13.38□□□□□ -0.27
VRK3-221ENST00000600284 COQ7Q99807 217 aa13.38□□□□□ -0.27
VRK3-221ENST00000600284 GAL3ST1Q99999 423 aa13.38□□□□□ -0.27
VRK3-221ENST00000600284 HDHD2Q9H0R4 259 aa13.38□□□□□ -0.27
VRK3-221ENST00000600284 OR52D1Q9H346 318 aa13.38□□□□□ -0.27
VRK3-221ENST00000600284 IL19Q9UHD0 177 aa13.38□□□□□ -0.27
VRK3-221ENST00000600284 TMCC3Q9ULS5 477 aa13.38□□□□□ -0.27
VRK3-221ENST00000600284 B9D1Q9UPM9 204 aa13.38□□□□□ -0.27
VRK3-221ENST00000600284 IGLV1-36A0A0B4J1U3 117 aa13.37□□□□□ -0.27
VRK3-221ENST00000600284 ARPC2O15144 300 aa13.37□□□□□ -0.27
VRK3-221ENST00000600284 RER1O15258 196 aa13.37□□□□□ -0.27
VRK3-221ENST00000600284 OR10H3O60404 316 aa13.37□□□□□ -0.27
VRK3-221ENST00000600284 DCTN3O75935 186 aa13.37□□□□□ -0.27
VRK3-221ENST00000600284 PPP1R3DO95685 299 aa13.37□□□□□ -0.27
VRK3-221ENST00000600284 RENP00797 406 aa13.37□□□□□ -0.27
VRK3-221ENST00000600284 SRSF2Q01130 221 aaKnown RBP13.37□□□□□ -0.27
VRK3-221ENST00000600284 C1orf94Q6P1W5 598 aa13.37□□□□□ -0.27
VRK3-221ENST00000600284 FBXW12Q6X9E4 464 aa13.37□□□□□ -0.27
VRK3-221ENST00000600284 ZFAND2BQ8WV99 257 aa13.37□□□□□ -0.27
VRK3-221ENST00000600284 APOBEC3DQ96AK3 386 aaPredicted RBP13.37□□□□□ -0.27
VRK3-221ENST00000600284 TSSK2Q96PF2 358 aa13.37□□□□□ -0.27
VRK3-221ENST00000600284 POFUT1Q9H488 388 aa13.37□□□□□ -0.27
VRK3-221ENST00000600284 OCEL1Q9H607 264 aa13.37□□□□□ -0.27
VRK3-221ENST00000600284 POLR1DQ9Y2S0 133 aa13.37□□□□□ -0.27
VRK3-221ENST00000600284 NPTNQ9Y639 398 aa13.37□□□□□ -0.27
VRK3-221ENST00000600284 V9GYQ6 96 aa13.37□□□□□ -0.27
VRK3-221ENST00000600284 PPIAL4EA0A075B759 164 aa13.36□□□□□ -0.27
VRK3-221ENST00000600284 PPIAL4CA0A0B4J2A2 164 aa13.36□□□□□ -0.27
VRK3-221ENST00000600284 PPIAL4DF5H284 164 aa13.36□□□□□ -0.27
VRK3-221ENST00000600284 DCTN6O00399 190 aa13.36□□□□□ -0.27
VRK3-221ENST00000600284 KRT36O76013 467 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms