RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 ADIPOQQ15848 244 aa11.84□□□□□ -0.51
VRK3-219ENST00000600137 SWI5Q1ZZU3 235 aa11.84□□□□□ -0.51
VRK3-219ENST00000600137 ELFN2Q5R3F8 820 aa11.84□□□□□ -0.51
VRK3-219ENST00000600137 SLC25A30Q5SVS4 291 aa11.84□□□□□ -0.51
VRK3-219ENST00000600137 NXNL2Q5VZ03 156 aa11.84□□□□□ -0.51
VRK3-219ENST00000600137 KRT80Q6KB66 452 aa11.84□□□□□ -0.51
VRK3-219ENST00000600137 ZNF544Q6NX49 715 aa11.84□□□□□ -0.51
VRK3-219ENST00000600137 C20orf204Q6ZNR8 217 aa11.84□□□□□ -0.51
VRK3-219ENST00000600137 MEPCEQ7L2J0 689 aaKnown RBP11.84□□□□□ -0.51
VRK3-219ENST00000600137 DPY19L4Q7Z388 723 aa11.84□□□□□ -0.51
VRK3-219ENST00000600137 ZNF101Q8IZC7 436 aa11.84□□□□□ -0.51
VRK3-219ENST00000600137 DEPDC4Q8N2C3 294 aa11.84□□□□□ -0.51
VRK3-219ENST00000600137 GALNT4Q8N4A0 578 aa11.84□□□□□ -0.51
VRK3-219ENST00000600137 PACRGLQ8N7B6 248 aa11.84□□□□□ -0.51
VRK3-219ENST00000600137 OR10H5Q8NGA6 315 aa11.84□□□□□ -0.51
VRK3-219ENST00000600137 OR8J1Q8NGP2 316 aa11.84□□□□□ -0.51
VRK3-219ENST00000600137 OR6K6Q8NGW6 343 aa11.84□□□□□ -0.51
VRK3-219ENST00000600137 OR1F12Q8NHA8 337 aa11.84□□□□□ -0.51
VRK3-219ENST00000600137 TRUB1Q8WWH5 349 aaKnown RBP11.84□□□□□ -0.51
VRK3-219ENST00000600137 OTULINQ96BN8 352 aa11.84□□□□□ -0.51
VRK3-219ENST00000600137 RDH12Q96NR8 316 aa11.84□□□□□ -0.51
VRK3-219ENST00000600137 AMELYQ99218 206 aa11.84□□□□□ -0.51
VRK3-219ENST00000600137 TRAF4Q9BUZ4 470 aaPredicted RBP11.84□□□□□ -0.51
VRK3-219ENST00000600137 TEX12Q9BXU0 123 aa11.84□□□□□ -0.51
VRK3-219ENST00000600137 ZNF442Q9H7R0 627 aa11.84□□□□□ -0.51
VRK3-219ENST00000600137 PLEK2Q9NYT0 353 aa11.84□□□□□ -0.51
VRK3-219ENST00000600137 AASSQ9UDR5 926 aa11.84□□□□□ -0.51
VRK3-219ENST00000600137 ATPIF1Q9UII2 106 aa11.84□□□□□ -0.51
VRK3-219ENST00000600137 LOC100130705A0A1B0GUX0 176 aa11.83□□□□□ -0.52
VRK3-219ENST00000600137 C5orf49A4QMS7 147 aa11.83□□□□□ -0.52
VRK3-219ENST00000600137 DOK2O60496 412 aa11.83□□□□□ -0.52
VRK3-219ENST00000600137 SELENOFO60613 162 aa11.83□□□□□ -0.52
VRK3-219ENST00000600137 NGFP01138 241 aa11.83□□□□□ -0.52
VRK3-219ENST00000600137 RAF1P04049 648 aa11.83□□□□□ -0.52
VRK3-219ENST00000600137 ZNF823P16415 610 aa11.83□□□□□ -0.52
VRK3-219ENST00000600137 ANOS1P23352 680 aa11.83□□□□□ -0.52
VRK3-219ENST00000600137 OTX1P32242 354 aaPredicted RBP11.83□□□□□ -0.52
VRK3-219ENST00000600137 APLNRP35414 380 aa11.83□□□□□ -0.52
VRK3-219ENST00000600137 HCCSP53701 268 aa11.83□□□□□ -0.52
VRK3-219ENST00000600137 UCP2P55851 309 aa11.83□□□□□ -0.52
VRK3-219ENST00000600137 ERVS71-1P61550 626 aa11.83□□□□□ -0.52
VRK3-219ENST00000600137 SNRPGP62308 76 aaKnown RBP11.83□□□□□ -0.52
VRK3-219ENST00000600137 ADARB1P78563 741 aaKnown RBP11.83□□□□□ -0.52
VRK3-219ENST00000600137 SNTB2Q13425 540 aaKnown RBP11.83□□□□□ -0.52
VRK3-219ENST00000600137 TBC1D28Q2M2D7 210 aa11.83□□□□□ -0.52
VRK3-219ENST00000600137 KLHL12Q53G59 568 aa11.83□□□□□ -0.52
VRK3-219ENST00000600137 TMEM255AQ5JRV8 349 aa11.83□□□□□ -0.52
VRK3-219ENST00000600137 DCXRQ7Z4W1 244 aa11.83□□□□□ -0.52
VRK3-219ENST00000600137 CDH24Q86UP0 819 aa11.83□□□□□ -0.52
VRK3-219ENST00000600137 NAA40Q86UY6 237 aa11.83□□□□□ -0.52
VRK3-219ENST00000600137 OR1J2Q8NGS2 313 aa11.83□□□□□ -0.52
VRK3-219ENST00000600137 RHOXF1Q8NHV9 184 aa11.83□□□□□ -0.52
VRK3-219ENST00000600137 NINJ1Q92982 152 aa11.83□□□□□ -0.52
VRK3-219ENST00000600137 MBD6Q96DN6 1003 aa11.83□□□□□ -0.52
VRK3-219ENST00000600137 INTS14Q96SY0 518 aa11.83□□□□□ -0.52
VRK3-219ENST00000600137 COQ7Q99807 217 aa11.83□□□□□ -0.52
VRK3-219ENST00000600137 CDH20Q9HBT6 801 aa11.83□□□□□ -0.52
VRK3-219ENST00000600137 SMPD3Q9NY59 655 aaPredicted RBP11.83□□□□□ -0.52
VRK3-219ENST00000600137 POU2F3Q9UKI9 436 aa11.83□□□□□ -0.52
VRK3-219ENST00000600137 LAMP3Q9UQV4 416 aa11.83□□□□□ -0.52
VRK3-219ENST00000600137 ORC6Q9Y5N6 252 aa11.83□□□□□ -0.52
VRK3-219ENST00000600137 PRRC2AP48634 2157 aaKnown RBP11.83□□□□□ -0.52
VRK3-219ENST00000600137 FAM157BP0CG42 384 aa11.82□□□□□ -0.52
VRK3-219ENST00000600137 PAX1P15863 534 aa11.82□□□□□ -0.52
VRK3-219ENST00000600137 HTR5AP47898 357 aa11.82□□□□□ -0.52
VRK3-219ENST00000600137 GDI2P50395 445 aaKnown RBP11.82□□□□□ -0.52
VRK3-219ENST00000600137 FABP6P51161 128 aa11.82□□□□□ -0.52
VRK3-219ENST00000600137 RIPK1Q13546 671 aa11.82□□□□□ -0.52
VRK3-219ENST00000600137 GGTLC2Q14390 218 aa11.82□□□□□ -0.52
VRK3-219ENST00000600137 TMEM154Q6P9G4 183 aa11.82□□□□□ -0.52
VRK3-219ENST00000600137 COLCA1Q6ZS62 124 aa11.82□□□□□ -0.52
VRK3-219ENST00000600137 ZNF771Q7L3S4 317 aaPredicted RBP11.82□□□□□ -0.52
VRK3-219ENST00000600137 LRP11Q86VZ4 500 aa11.82□□□□□ -0.52
VRK3-219ENST00000600137 ERI1Q8IV48 349 aaKnown RBP11.82□□□□□ -0.52
VRK3-219ENST00000600137 ENTHD1Q8IYW4 607 aa11.82□□□□□ -0.52
VRK3-219ENST00000600137 OR2AJ1Q8NGZ0 328 aa11.82□□□□□ -0.52
VRK3-219ENST00000600137 OTOSQ8NHW6 89 aa11.82□□□□□ -0.52
VRK3-219ENST00000600137 FAM81AQ8TBF8 368 aa11.82□□□□□ -0.52
VRK3-219ENST00000600137 C4orf45Q96LM5 186 aa11.82□□□□□ -0.52
VRK3-219ENST00000600137 ZNF582Q96NG8 517 aaPredicted RBP11.82□□□□□ -0.52
VRK3-219ENST00000600137 DOK1Q99704 481 aa11.82□□□□□ -0.52
VRK3-219ENST00000600137 KCNS3Q9BQ31 491 aa11.82□□□□□ -0.52
VRK3-219ENST00000600137 ABHD6Q9BV23 337 aa11.82□□□□□ -0.52
VRK3-219ENST00000600137 CDADC1Q9BWV3 514 aa11.82□□□□□ -0.52
VRK3-219ENST00000600137 PRRG3Q9BZD7 231 aa11.82□□□□□ -0.52
VRK3-219ENST00000600137 HDHD2Q9H0R4 259 aa11.82□□□□□ -0.52
VRK3-219ENST00000600137 C8orf4Q9NR00 106 aa11.82□□□□□ -0.52
VRK3-219ENST00000600137 DDX28Q9NUL7 540 aaKnown RBP11.82□□□□□ -0.52
VRK3-219ENST00000600137 HAO2Q9NYQ3 351 aa11.82□□□□□ -0.52
VRK3-219ENST00000600137 POLR1DQ9Y2S0 133 aa11.82□□□□□ -0.52
VRK3-219ENST00000600137 KLHDC2Q9Y2U9 406 aa11.82□□□□□ -0.52
VRK3-219ENST00000600137 PRR32B1ATL7 298 aa11.81□□□□□ -0.52
VRK3-219ENST00000600137 SMPD2O60906 423 aa11.81□□□□□ -0.52
VRK3-219ENST00000600137 SPARCP09486 303 aa11.81□□□□□ -0.52
VRK3-219ENST00000600137 OR4A8P0C604 315 aa11.81□□□□□ -0.52
VRK3-219ENST00000600137 ZNF250P15622 560 aa11.81□□□□□ -0.52
VRK3-219ENST00000600137 ALOX5APP20292 161 aa11.81□□□□□ -0.52
VRK3-219ENST00000600137 CCNOP22674 350 aa11.81□□□□□ -0.52
VRK3-219ENST00000600137 SERPINF1P36955 418 aa11.81□□□□□ -0.52
VRK3-219ENST00000600137 CDC42P60953 191 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms