RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 ATP5HO75947 161 aa12.11□□□□□ -0.47
LIG1-218ENST00000599322 GASTP01350 101 aa12.11□□□□□ -0.47
LIG1-218ENST00000599322 IFNA2P01563 188 aa12.11□□□□□ -0.47
LIG1-218ENST00000599322 HNF1AP20823 631 aa12.11□□□□□ -0.47
LIG1-218ENST00000599322 TNFSF4P23510 183 aa12.11□□□□□ -0.47
LIG1-218ENST00000599322 ERVS71-1P61550 626 aa12.11□□□□□ -0.47
LIG1-218ENST00000599322 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.11□□□□□ -0.47
LIG1-218ENST00000599322 COX10Q12887 443 aa12.11□□□□□ -0.47
LIG1-218ENST00000599322 ECH1Q13011 328 aa12.11□□□□□ -0.47
LIG1-218ENST00000599322 KCNMB1Q16558 191 aa12.11□□□□□ -0.47
LIG1-218ENST00000599322 CHRFAM7AQ494W8 412 aa12.11□□□□□ -0.47
LIG1-218ENST00000599322 SPATA46Q5T0L3 261 aa12.11□□□□□ -0.47
LIG1-218ENST00000599322 SLC35F1Q5T1Q4 408 aa12.11□□□□□ -0.47
LIG1-218ENST00000599322 MBNL2Q5VZF2 373 aaKnown RBP12.11□□□□□ -0.47
LIG1-218ENST00000599322 FAM166AQ6J272 317 aa12.11□□□□□ -0.47
LIG1-218ENST00000599322 SDR9C7Q8NEX9 313 aa12.11□□□□□ -0.47
LIG1-218ENST00000599322 PROKR2Q8NFJ6 384 aa12.11□□□□□ -0.47
LIG1-218ENST00000599322 OR2T33Q8NG76 320 aa12.11□□□□□ -0.47
LIG1-218ENST00000599322 OR9Q2Q8NGE9 314 aa12.11□□□□□ -0.47
LIG1-218ENST00000599322 OR1F12Q8NHA8 337 aa12.11□□□□□ -0.47
LIG1-218ENST00000599322 TEX47Q8TBZ9 253 aa12.11□□□□□ -0.47
LIG1-218ENST00000599322 KLF14Q8TD94 323 aaPredicted RBP12.11□□□□□ -0.47
LIG1-218ENST00000599322 GIPC3Q8TF64 312 aa12.11□□□□□ -0.47
LIG1-218ENST00000599322 HPS1Q92902 700 aa12.11□□□□□ -0.47
LIG1-218ENST00000599322 TIMD4Q96H15 378 aa12.11□□□□□ -0.47
LIG1-218ENST00000599322 CLPTM1LQ96KA5 538 aa12.11□□□□□ -0.47
LIG1-218ENST00000599322 PITX2Q99697 317 aa12.11□□□□□ -0.47
LIG1-218ENST00000599322 TSSK6Q9BXA6 273 aa12.11□□□□□ -0.47
LIG1-218ENST00000599322 TEX12Q9BXU0 123 aa12.11□□□□□ -0.47
LIG1-218ENST00000599322 OR2J1Q9GZK6 312 aa12.11□□□□□ -0.47
LIG1-218ENST00000599322 HDHD2Q9H0R4 259 aa12.11□□□□□ -0.47
LIG1-218ENST00000599322 IL20Q9NYY1 176 aa12.11□□□□□ -0.47
LIG1-218ENST00000599322 MYEF2Q9P2K5 600 aaKnown RBP12.11□□□□□ -0.47
LIG1-218ENST00000599322 LPAR3Q9UBY5 353 aa12.11□□□□□ -0.47
LIG1-218ENST00000599322 ATPIF1Q9UII2 106 aa12.11□□□□□ -0.47
LIG1-218ENST00000599322 KCNG2Q9UJ96 466 aa12.11□□□□□ -0.47
LIG1-218ENST00000599322 KLHL21Q9UJP4 597 aa12.11□□□□□ -0.47
LIG1-218ENST00000599322 LOC100289279A0A1B0GTE1 492 aa12.1□□□□□ -0.47
LIG1-218ENST00000599322 H3BN98 237 aa12.1□□□□□ -0.47
LIG1-218ENST00000599322 J3QW42 95 aa12.1□□□□□ -0.47
LIG1-218ENST00000599322 PPIHO43447 177 aaKnown RBP12.1□□□□□ -0.47
LIG1-218ENST00000599322 MPZL1O95297 269 aa12.1□□□□□ -0.47
LIG1-218ENST00000599322 PCMT1P22061 227 aa12.1□□□□□ -0.47
LIG1-218ENST00000599322 WNT5AP41221 380 aa12.1□□□□□ -0.47
LIG1-218ENST00000599322 FXYD6P3P58550 94 aa12.1□□□□□ -0.47
LIG1-218ENST00000599322 CCL8P80075 99 aa12.1□□□□□ -0.47
LIG1-218ENST00000599322 KRTAP1-1Q07627 177 aa12.1□□□□□ -0.47
LIG1-218ENST00000599322 SLC3A1Q07837 685 aa12.1□□□□□ -0.47
LIG1-218ENST00000599322 MSMPQ1L6U9 139 aa12.1□□□□□ -0.47
LIG1-218ENST00000599322 HFEQ30201 348 aa12.1□□□□□ -0.47
LIG1-218ENST00000599322 ELFN2Q5R3F8 820 aa12.1□□□□□ -0.47
LIG1-218ENST00000599322 C6orf52Q5T4I8 152 aa12.1□□□□□ -0.47
LIG1-218ENST00000599322 VASH1Q7L8A9 365 aaPredicted RBP12.1□□□□□ -0.47
LIG1-218ENST00000599322 PEG10Q86TG7 708 aaKnown RBP12.1□□□□□ -0.47
LIG1-218ENST00000599322 ZNF101Q8IZC7 436 aa12.1□□□□□ -0.47
LIG1-218ENST00000599322 OR6V1Q8N148 313 aa12.1□□□□□ -0.47
LIG1-218ENST00000599322 OR10G2Q8NGC3 310 aa12.1□□□□□ -0.47
LIG1-218ENST00000599322 ELMOD3Q96FG2 381 aa12.1□□□□□ -0.47
LIG1-218ENST00000599322 MARS2Q96GW9 593 aaKnown RBP12.1□□□□□ -0.47
LIG1-218ENST00000599322 TSSK2Q96PF2 358 aa12.1□□□□□ -0.47
LIG1-218ENST00000599322 BEX2Q9BXY8 128 aa12.1□□□□□ -0.47
LIG1-218ENST00000599322 DGCR6LQ9BY27 220 aa12.1□□□□□ -0.47
LIG1-218ENST00000599322 EGLN3Q9H6Z9 239 aa12.1□□□□□ -0.47
LIG1-218ENST00000599322 SAP30LQ9HAJ7 183 aa12.1□□□□□ -0.47
LIG1-218ENST00000599322 CDC42EP3Q9UKI2 254 aa12.1□□□□□ -0.47
LIG1-218ENST00000599322 ZDHHC8Q9ULC8 765 aa12.1□□□□□ -0.47
LIG1-218ENST00000599322 FBN1P35555 2871 aaKnown RBP12.1□□□□□ -0.47
LIG1-218ENST00000599322 YLPM1P49750 1951 aaKnown RBP12.1□□□□□ -0.47
LIG1-218ENST00000599322 RIIAD1A6NNX1 92 aa12.09□□□□□ -0.47
LIG1-218ENST00000599322 SURF4O15260 269 aa12.09□□□□□ -0.47
LIG1-218ENST00000599322 SPRY3O43610 288 aa12.09□□□□□ -0.47
LIG1-218ENST00000599322 LMX1BO60663 402 aa12.09□□□□□ -0.47
LIG1-218ENST00000599322 ICMTO60725 284 aa12.09□□□□□ -0.47
LIG1-218ENST00000599322 HPXP02790 462 aa12.09□□□□□ -0.47
LIG1-218ENST00000599322 SCG5P05408 212 aa12.09□□□□□ -0.47
LIG1-218ENST00000599322 IGHV4-31P0DP07 118 aa12.09□□□□□ -0.47
LIG1-218ENST00000599322 BLVRAP53004 296 aa12.09□□□□□ -0.47
LIG1-218ENST00000599322 PPP1R8Q12972 351 aaKnown RBP12.09□□□□□ -0.47
LIG1-218ENST00000599322 TSTQ16762 297 aaKnown RBP12.09□□□□□ -0.47
LIG1-218ENST00000599322 OR4C15Q8NGM1 316 aa12.09□□□□□ -0.47
LIG1-218ENST00000599322 PTP4A1Q93096 173 aa12.09□□□□□ -0.47
LIG1-218ENST00000599322 COQ7Q99807 217 aa12.09□□□□□ -0.47
LIG1-218ENST00000599322 SHARPINQ9H0F6 387 aa12.09□□□□□ -0.47
LIG1-218ENST00000599322 A0A096LNT2 108 aa12.08□□□□□ -0.48
LIG1-218ENST00000599322 IGLV1-36A0A0B4J1U3 117 aa12.08□□□□□ -0.48
LIG1-218ENST00000599322 IGHV4-61A0A0C4DH41 118 aa12.08□□□□□ -0.48
LIG1-218ENST00000599322 IGHV1-69-2A0A0G2JMI3 117 aa12.08□□□□□ -0.48
LIG1-218ENST00000599322 LYNX1G3V0Z9 82 aa12.08□□□□□ -0.48
LIG1-218ENST00000599322 ACOT8O14734 319 aa12.08□□□□□ -0.48
LIG1-218ENST00000599322 RER1O15258 196 aa12.08□□□□□ -0.48
LIG1-218ENST00000599322 CDC14BO60729 498 aa12.08□□□□□ -0.48
LIG1-218ENST00000599322 TGFAP01135 160 aa12.08□□□□□ -0.48
LIG1-218ENST00000599322 NGFP01138 241 aa12.08□□□□□ -0.48
LIG1-218ENST00000599322 TACSTD2P09758 323 aa12.08□□□□□ -0.48
LIG1-218ENST00000599322 LYNX1P0DP58 116 aa12.08□□□□□ -0.48
LIG1-218ENST00000599322 ZNF3P17036 446 aa12.08□□□□□ -0.48
LIG1-218ENST00000599322 PAICSP22234 425 aaKnown RBP12.08□□□□□ -0.48
LIG1-218ENST00000599322 FMO3P31513 532 aa12.08□□□□□ -0.48
LIG1-218ENST00000599322 MAGEB1P43366 347 aa12.08□□□□□ -0.48
LIG1-218ENST00000599322 MALLQ13021 153 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms