RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 KCNN2Q9H2S1 579 aa12.4□□□□□ -0.42
IRF3-223ENST00000599223 C7orf69Q9H7B7 122 aa12.4□□□□□ -0.42
IRF3-223ENST00000599223 AP4S1Q9Y587 144 aa12.4□□□□□ -0.42
IRF3-223ENST00000599223 A0A1W2PPL8 197 aa12.39□□□□□ -0.43
IRF3-223ENST00000599223 PLSCR5A0PG75 271 aa12.39□□□□□ -0.43
IRF3-223ENST00000599223 CXCR6O00574 342 aa12.39□□□□□ -0.43
IRF3-223ENST00000599223 IGHV2-70P01814 119 aa12.39□□□□□ -0.43
IRF3-223ENST00000599223 CD55P08174 381 aa12.39□□□□□ -0.43
IRF3-223ENST00000599223 CST2P09228 141 aa12.39□□□□□ -0.43
IRF3-223ENST00000599223 THRBP10828 461 aa12.39□□□□□ -0.43
IRF3-223ENST00000599223 IFI30P13284 250 aa12.39□□□□□ -0.43
IRF3-223ENST00000599223 ATP6V1B2P21281 511 aa12.39□□□□□ -0.43
IRF3-223ENST00000599223 RPL27P61353 136 aaKnown RBP12.39□□□□□ -0.43
IRF3-223ENST00000599223 UBA52P62987 128 aaKnown RBP12.39□□□□□ -0.43
IRF3-223ENST00000599223 MOGQ16653 247 aa12.39□□□□□ -0.43
IRF3-223ENST00000599223 TUSC1Q2TAM9 212 aa12.39□□□□□ -0.43
IRF3-223ENST00000599223 FAM98BQ52LJ0 330 aaKnown RBP12.39□□□□□ -0.43
IRF3-223ENST00000599223 OTPQ5XKR4 325 aa12.39□□□□□ -0.43
IRF3-223ENST00000599223 Q6ZR03 302 aa12.39□□□□□ -0.43
IRF3-223ENST00000599223 BPIFB2Q8N4F0 458 aa12.39□□□□□ -0.43
IRF3-223ENST00000599223 TEX29Q8N6K0 151 aa12.39□□□□□ -0.43
IRF3-223ENST00000599223 OR13C2Q8NGS9 318 aa12.39□□□□□ -0.43
IRF3-223ENST00000599223 NANPQ8TBE9 248 aa12.39□□□□□ -0.43
IRF3-223ENST00000599223 BPIFA2Q96DR5 249 aa12.39□□□□□ -0.43
IRF3-223ENST00000599223 PRRC1Q96M27 445 aa12.39□□□□□ -0.43
IRF3-223ENST00000599223 C1QTNF5Q9BXJ0 243 aa12.39□□□□□ -0.43
IRF3-223ENST00000599223 GORASP2Q9H8Y8 452 aa12.39□□□□□ -0.43
IRF3-223ENST00000599223 EMC7Q9NPA0 242 aa12.39□□□□□ -0.43
IRF3-223ENST00000599223 MMP26Q9NRE1 261 aa12.39□□□□□ -0.43
IRF3-223ENST00000599223 RHCGQ9UBD6 479 aa12.39□□□□□ -0.43
IRF3-223ENST00000599223 EIF3KQ9UBQ5 218 aaKnown RBP12.39□□□□□ -0.43
IRF3-223ENST00000599223 KLHL21Q9UJP4 597 aa12.39□□□□□ -0.43
IRF3-223ENST00000599223 AURKCQ9UQB9 309 aa12.39□□□□□ -0.43
IRF3-223ENST00000599223 PPIAL4AQ9Y536 164 aa12.39□□□□□ -0.43
IRF3-223ENST00000599223 CMYA5Q8N3K9 4069 aa12.38□□□□□ -0.43
IRF3-223ENST00000599223 H3BSA7 217 aa12.38□□□□□ -0.43
IRF3-223ENST00000599223 J3KTA2 159 aa12.38□□□□□ -0.43
IRF3-223ENST00000599223 NCK1P16333 377 aa12.38□□□□□ -0.43
IRF3-223ENST00000599223 ZNF26P17031 533 aaPredicted RBP12.38□□□□□ -0.43
IRF3-223ENST00000599223 VHLP40337 213 aa12.38□□□□□ -0.43
IRF3-223ENST00000599223 YAP1P46937 504 aaKnown RBP12.38□□□□□ -0.43
IRF3-223ENST00000599223 CTXN1P60606 82 aa12.38□□□□□ -0.43
IRF3-223ENST00000599223 PSG7Q13046 419 aa12.38□□□□□ -0.43
IRF3-223ENST00000599223 TAF11Q15544 211 aa12.38□□□□□ -0.43
IRF3-223ENST00000599223 VTCN1Q7Z7D3 282 aa12.38□□□□□ -0.43
IRF3-223ENST00000599223 NRMQ8IXM6 262 aa12.38□□□□□ -0.43
IRF3-223ENST00000599223 PQLC1Q8N2U9 271 aa12.38□□□□□ -0.43
IRF3-223ENST00000599223 OR51A7Q8NH64 312 aa12.38□□□□□ -0.43
IRF3-223ENST00000599223 ZMYND19Q96E35 227 aaPredicted RBP12.38□□□□□ -0.43
IRF3-223ENST00000599223 DUS3LQ96G46 650 aaKnown RBP12.38□□□□□ -0.43
IRF3-223ENST00000599223 TPD52L3Q96J77 140 aa12.38□□□□□ -0.43
IRF3-223ENST00000599223 C4orf45Q96LM5 186 aa12.38□□□□□ -0.43
IRF3-223ENST00000599223 C1orf147Q96MC9 270 aaPredicted RBP12.38□□□□□ -0.43
IRF3-223ENST00000599223 SIGLEC11Q96RL6 698 aa12.38□□□□□ -0.43
IRF3-223ENST00000599223 JMJD8Q96S16 334 aa12.38□□□□□ -0.43
IRF3-223ENST00000599223 VCXQ9H320 206 aa12.38□□□□□ -0.43
IRF3-223ENST00000599223 POLE4Q9NR33 117 aa12.38□□□□□ -0.43
IRF3-223ENST00000599223 NKX1-2Q9UD57 310 aaPredicted RBP12.38□□□□□ -0.43
IRF3-223ENST00000599223 RPS6KA6Q9UK32 745 aa12.38□□□□□ -0.43
IRF3-223ENST00000599223 SAMD4AQ9UPU9 718 aaKnown RBP12.38□□□□□ -0.43
IRF3-223ENST00000599223 ADAM18Q9Y3Q7 739 aa12.38□□□□□ -0.43
IRF3-223ENST00000599223 FFAR1O14842 300 aa12.37□□□□□ -0.43
IRF3-223ENST00000599223 TIMM8AO60220 97 aaPredicted RBP12.37□□□□□ -0.43
IRF3-223ENST00000599223 IFNA14P01570 189 aa12.37□□□□□ -0.43
IRF3-223ENST00000599223 MSR1P21757 451 aa12.37□□□□□ -0.43
IRF3-223ENST00000599223 GATA3P23771 443 aa12.37□□□□□ -0.43
IRF3-223ENST00000599223 LIMS1P48059 325 aa12.37□□□□□ -0.43
IRF3-223ENST00000599223 TNFAIP6P98066 277 aaPredicted RBP12.37□□□□□ -0.43
IRF3-223ENST00000599223 KLF17Q5JT82 389 aaPredicted RBP12.37□□□□□ -0.43
IRF3-223ENST00000599223 OFCC1Q8IZS5 231 aa12.37□□□□□ -0.43
IRF3-223ENST00000599223 SIGLECL1Q8N7X8 197 aa12.37□□□□□ -0.43
IRF3-223ENST00000599223 SLC7A6Q92536 515 aa12.37□□□□□ -0.43
IRF3-223ENST00000599223 DUX5Q96PT3 197 aa12.37□□□□□ -0.43
IRF3-223ENST00000599223 DCLRE1CQ96SD1 692 aaKnown RBP12.37□□□□□ -0.43
IRF3-223ENST00000599223 EGLN1Q9GZT9 426 aa12.37□□□□□ -0.43
IRF3-223ENST00000599223 CYSLTR2Q9NS75 346 aa12.37□□□□□ -0.43
IRF3-223ENST00000599223 TMEM106BQ9NUM4 274 aa12.37□□□□□ -0.43
IRF3-223ENST00000599223 ARMC1Q9NVT9 282 aa12.37□□□□□ -0.43
IRF3-223ENST00000599223 CGGBP1Q9UFW8 167 aaPredicted RBP12.37□□□□□ -0.43
IRF3-223ENST00000599223 PURGQ9UJV8 347 aaKnown RBP12.37□□□□□ -0.43
IRF3-223ENST00000599223 TIMM10BQ9Y5J6 103 aa12.37□□□□□ -0.43
IRF3-223ENST00000599223 NPTNQ9Y639 398 aa12.37□□□□□ -0.43
IRF3-223ENST00000599223 TRAPPC2LH3BP13 241 aa12.36□□□□□ -0.43
IRF3-223ENST00000599223 CDC42EP2O14613 210 aa12.36□□□□□ -0.43
IRF3-223ENST00000599223 KCNAB3O43448 404 aa12.36□□□□□ -0.43
IRF3-223ENST00000599223 DOK2O60496 412 aa12.36□□□□□ -0.43
IRF3-223ENST00000599223 ABHD16AO95870 558 aa12.36□□□□□ -0.43
IRF3-223ENST00000599223 NR2C1P13056 603 aa12.36□□□□□ -0.43
IRF3-223ENST00000599223 KDELR2P33947 212 aa12.36□□□□□ -0.43
IRF3-223ENST00000599223 GPR4P46093 362 aa12.36□□□□□ -0.43
IRF3-223ENST00000599223 ST3GAL3Q11203 375 aa12.36□□□□□ -0.43
IRF3-223ENST00000599223 CDK5R2Q13319 367 aa12.36□□□□□ -0.43
IRF3-223ENST00000599223 ZMYND11Q15326 602 aa12.36□□□□□ -0.43
IRF3-223ENST00000599223 MESTQ5EB52 335 aa12.36□□□□□ -0.43
IRF3-223ENST00000599223 FAM205BPQ63HN1 556 aa12.36□□□□□ -0.43
IRF3-223ENST00000599223 BCL6BQ8N143 479 aaPredicted RBP12.36□□□□□ -0.43
IRF3-223ENST00000599223 ZNF48Q96MX3 618 aaPredicted RBP12.36□□□□□ -0.43
IRF3-223ENST00000599223 ZNF69Q9UC07 566 aa12.36□□□□□ -0.43
IRF3-223ENST00000599223 ZDHHC8Q9ULC8 765 aa12.36□□□□□ -0.43
IRF3-223ENST00000599223 PCDHGB1Q9Y5G3 927 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms