RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 POU4F3Q15319 338 aa15.1■□□□□ 0.01
SHKBP1-216ENST00000598201 FCRLAQ7L513 359 aa15.1■□□□□ 0.01
SHKBP1-216ENST00000598201 UBQLNLQ8IYU4 475 aa15.1■□□□□ 0.01
SHKBP1-216ENST00000598201 CMTM4Q8IZR5 234 aa15.1■□□□□ 0.01
SHKBP1-216ENST00000598201 ASB5Q8WWX0 329 aa15.1■□□□□ 0.01
SHKBP1-216ENST00000598201 SLC25A38Q96DW6 304 aa15.1■□□□□ 0.01
SHKBP1-216ENST00000598201 SFXN2Q96NB2 322 aa15.1■□□□□ 0.01
SHKBP1-216ENST00000598201 C1orf198Q9H425 327 aa15.1■□□□□ 0.01
SHKBP1-216ENST00000598201 GLTPQ9NZD2 209 aa15.1■□□□□ 0.01
SHKBP1-216ENST00000598201 OR5V1Q9UGF6 321 aa15.1■□□□□ 0.01
SHKBP1-216ENST00000598201 NPIPA2E9PIF3 369 aa15.09■□□□□ 0.01
SHKBP1-216ENST00000598201 NPIPA3F8WFD2 350 aa15.09■□□□□ 0.01
SHKBP1-216ENST00000598201 VAMP5O95183 116 aa15.09■□□□□ 0.01
SHKBP1-216ENST00000598201 WDPCPO95876 746 aa15.09■□□□□ 0.01
SHKBP1-216ENST00000598201 LIPCP11150 499 aa15.09■□□□□ 0.01
SHKBP1-216ENST00000598201 RFC3P40938 356 aa15.09■□□□□ 0.01
SHKBP1-216ENST00000598201 KIR2DL3P43628 341 aa15.09■□□□□ 0.01
SHKBP1-216ENST00000598201 CLDN15P56746 228 aa15.09■□□□□ 0.01
SHKBP1-216ENST00000598201 RAC3P60763 192 aa15.09■□□□□ 0.01
SHKBP1-216ENST00000598201 UBE2NLQ5JXB2 153 aa15.09■□□□□ 0.01
SHKBP1-216ENST00000598201 ZNF544Q6NX49 715 aa15.09■□□□□ 0.01
SHKBP1-216ENST00000598201 LINC00696Q6ZRV3 163 aa15.09■□□□□ 0.01
SHKBP1-216ENST00000598201 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.09■□□□□ 0.01
SHKBP1-216ENST00000598201 IZUMO1Q8IYV9 350 aa15.09■□□□□ 0.01
SHKBP1-216ENST00000598201 TMEM123Q8N131 208 aa15.09■□□□□ 0.01
SHKBP1-216ENST00000598201 KCNE4Q8WWG9 221 aa15.09■□□□□ 0.01
SHKBP1-216ENST00000598201 TRIM63Q969Q1 353 aa15.09■□□□□ 0.01
SHKBP1-216ENST00000598201 THAP7Q9BT49 309 aaPredicted RBP15.09■□□□□ 0.01
SHKBP1-216ENST00000598201 FAM206AQ9NX38 181 aa15.09■□□□□ 0.01
SHKBP1-216ENST00000598201 DKK4Q9UBT3 224 aa15.09■□□□□ 0.01
SHKBP1-216ENST00000598201 TLX3O43711 291 aaPredicted RBP15.08■□□□□ 0.01
SHKBP1-216ENST00000598201 CSNK1A1P48729 337 aa15.08■□□□□ 0.01
SHKBP1-216ENST00000598201 AIMP2Q13155 320 aaKnown RBP15.08■□□□□ 0.01
SHKBP1-216ENST00000598201 PYHIN1Q6K0P9 492 aa15.08■□□□□ 0.01
SHKBP1-216ENST00000598201 NCCRP1Q6ZVX7 275 aaPredicted RBP15.08■□□□□ 0.01
SHKBP1-216ENST00000598201 OR2M7Q8NG81 312 aa15.08■□□□□ 0.01
SHKBP1-216ENST00000598201 TMEM54Q969K7 222 aa15.08■□□□□ 0.01
SHKBP1-216ENST00000598201 ZNF775Q96BV0 537 aaPredicted RBP15.08■□□□□ 0.01
SHKBP1-216ENST00000598201 ADGRG7Q96K78 797 aa15.08■□□□□ 0.01
SHKBP1-216ENST00000598201 UTP23Q9BRU9 249 aaKnown RBP15.08■□□□□ 0.01
SHKBP1-216ENST00000598201 FAM117AQ9C073 453 aa15.08■□□□□ 0.01
SHKBP1-216ENST00000598201 OR2B2Q9GZK3 357 aa15.08■□□□□ 0.01
SHKBP1-216ENST00000598201 HDHD2Q9H0R4 259 aa15.08■□□□□ 0.01
SHKBP1-216ENST00000598201 ASH2LQ9UBL3 628 aa15.08■□□□□ 0.01
SHKBP1-216ENST00000598201 DHDHQ9UQ10 334 aa15.08■□□□□ 0.01
SHKBP1-216ENST00000598201 MRPS7Q9Y2R9 242 aaKnown RBP15.08■□□□□ 0.01
SHKBP1-216ENST00000598201 POLR1DQ9Y2S0 133 aa15.08■□□□□ 0.01
SHKBP1-216ENST00000598201 LOC107986453A0A1B0GWG9 222 aa15.08■□□□□ 0
SHKBP1-216ENST00000598201 ANXA2P2A6NMY6 339 aa15.08■□□□□ 0
SHKBP1-216ENST00000598201 EEF1E1O43324 174 aaKnown RBP15.08■□□□□ 0
SHKBP1-216ENST00000598201 TPD52L2O43399 206 aaKnown RBP15.08■□□□□ 0
SHKBP1-216ENST00000598201 ANXA2P07355 339 aaKnown RBP15.08■□□□□ 0
SHKBP1-216ENST00000598201 MAP2K3P46734 347 aa15.08■□□□□ 0
SHKBP1-216ENST00000598201 SELENOPP49908 381 aa15.08■□□□□ 0
SHKBP1-216ENST00000598201 MMP16P51512 607 aa15.08■□□□□ 0
SHKBP1-216ENST00000598201 CARD18P57730 90 aa15.08■□□□□ 0
SHKBP1-216ENST00000598201 OR1C1Q15619 314 aa15.08■□□□□ 0
SHKBP1-216ENST00000598201 KCNMB1Q16558 191 aa15.08■□□□□ 0
SHKBP1-216ENST00000598201 GLCCI1Q86VQ1 547 aa15.08■□□□□ 0
SHKBP1-216ENST00000598201 OR6N1Q8NGY5 312 aa15.08■□□□□ 0
SHKBP1-216ENST00000598201 MRPS18CQ9Y3D5 142 aaKnown RBP15.08■□□□□ 0
SHKBP1-216ENST00000598201 KIAA1549Q9HCM3 1950 aa15.07■□□□□ 0
SHKBP1-216ENST00000598201 TFECO14948 347 aaPredicted RBP15.07■□□□□ 0
SHKBP1-216ENST00000598201 RER1O15258 196 aa15.07■□□□□ 0
SHKBP1-216ENST00000598201 CXCL13O43927 109 aa15.07■□□□□ 0
SHKBP1-216ENST00000598201 LMX1BO60663 402 aa15.07■□□□□ 0
SHKBP1-216ENST00000598201 UBL3O95164 117 aa15.07■□□□□ 0
SHKBP1-216ENST00000598201 NTF4P34130 210 aa15.07■□□□□ 0
SHKBP1-216ENST00000598201 CASRP41180 1078 aa15.07■□□□□ 0
SHKBP1-216ENST00000598201 GFRA1P56159 465 aa15.07■□□□□ 0
SHKBP1-216ENST00000598201 ZNF57Q68EA5 555 aaPredicted RBP15.07■□□□□ 0
SHKBP1-216ENST00000598201 RFT1Q96AA3 541 aa15.07■□□□□ 0
SHKBP1-216ENST00000598201 ZFP3Q96NJ6 502 aa15.07■□□□□ 0
SHKBP1-216ENST00000598201 NKX3-1Q99801 234 aaPredicted RBP15.07■□□□□ 0
SHKBP1-216ENST00000598201 FAM173AQ9BQD7 235 aa15.07■□□□□ 0
SHKBP1-216ENST00000598201 BOKQ9UMX3 212 aaPredicted RBP15.07■□□□□ 0
SHKBP1-216ENST00000598201 FRYQ5TBA9 3013 aa15.07■□□□□ 0
SHKBP1-216ENST00000598201 P2RY10O00398 339 aa15.07■□□□□ 0
SHKBP1-216ENST00000598201 LYRM1O43325 122 aa15.07■□□□□ 0
SHKBP1-216ENST00000598201 ISG15P05161 165 aa15.07■□□□□ 0
SHKBP1-216ENST00000598201 CELA3AP09093 270 aa15.07■□□□□ 0
SHKBP1-216ENST00000598201 FAM157BP0CG42 384 aa15.07■□□□□ 0
SHKBP1-216ENST00000598201 PLA2G7Q13093 441 aa15.07■□□□□ 0
SHKBP1-216ENST00000598201 RNASE12Q5GAN4 147 aaKnown RBP15.07■□□□□ 0
SHKBP1-216ENST00000598201 BCL2L15Q5TBC7 163 aa15.07■□□□□ 0
SHKBP1-216ENST00000598201 ASB18Q6ZVZ8 466 aa15.07■□□□□ 0
SHKBP1-216ENST00000598201 SERPINA12Q8IW75 414 aa15.07■□□□□ 0
SHKBP1-216ENST00000598201 SULF2Q8IWU5 870 aa15.07■□□□□ 0
SHKBP1-216ENST00000598201 OR2AJ1Q8NGZ0 328 aa15.07■□□□□ 0
SHKBP1-216ENST00000598201 OR10D3Q8NH80 312 aa15.07■□□□□ 0
SHKBP1-216ENST00000598201 ROBO4Q8WZ75 1007 aa15.07■□□□□ 0
SHKBP1-216ENST00000598201 HPS1Q92902 700 aa15.07■□□□□ 0
SHKBP1-216ENST00000598201 CMTM3Q96MX0 182 aa15.07■□□□□ 0
SHKBP1-216ENST00000598201 PNRC2Q9NPJ4 139 aaKnown RBP15.07■□□□□ 0
SHKBP1-216ENST00000598201 TAS2R4Q9NYW5 299 aa15.07■□□□□ 0
SHKBP1-216ENST00000598201 HHLA2Q9UM44 414 aa15.07■□□□□ 0
SHKBP1-216ENST00000598201 C1QTNF9BB2RNN3 333 aa15.06■□□□□ 0
SHKBP1-216ENST00000598201 DNPH1O43598 174 aa15.06■□□□□ 0
SHKBP1-216ENST00000598201 TTRP02766 147 aa15.06■□□□□ 0
SHKBP1-216ENST00000598201 C1QTNF9P0C862 333 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms