RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 SLC6A6P31641 620 aa12.81□□□□□ -0.36
LIG1-215ENST00000597901 GSSP48637 474 aa12.81□□□□□ -0.36
LIG1-215ENST00000597901 HFEQ30201 348 aa12.81□□□□□ -0.36
LIG1-215ENST00000597901 AVPI1Q5T686 147 aa12.81□□□□□ -0.36
LIG1-215ENST00000597901 CYP2R1Q6VVX0 501 aa12.81□□□□□ -0.36
LIG1-215ENST00000597901 OR6V1Q8N148 313 aa12.81□□□□□ -0.36
LIG1-215ENST00000597901 OR4K13Q8NH42 304 aa12.81□□□□□ -0.36
LIG1-215ENST00000597901 OR1F12Q8NHA8 337 aa12.81□□□□□ -0.36
LIG1-215ENST00000597901 SLC7A6Q92536 515 aa12.81□□□□□ -0.36
LIG1-215ENST00000597901 CCL17Q92583 94 aa12.81□□□□□ -0.36
LIG1-215ENST00000597901 PTP4A1Q93096 173 aa12.81□□□□□ -0.36
LIG1-215ENST00000597901 CMBLQ96DG6 245 aa12.81□□□□□ -0.36
LIG1-215ENST00000597901 ELMOD3Q96FG2 381 aa12.81□□□□□ -0.36
LIG1-215ENST00000597901 NMNAT3Q96T66 252 aa12.81□□□□□ -0.36
LIG1-215ENST00000597901 IFT27Q9BW83 186 aa12.81□□□□□ -0.36
LIG1-215ENST00000597901 POFUT1Q9H488 388 aa12.81□□□□□ -0.36
LIG1-215ENST00000597901 ACTR3BQ9P1U1 418 aa12.81□□□□□ -0.36
LIG1-215ENST00000597901 ZDHHC8Q9ULC8 765 aa12.81□□□□□ -0.36
LIG1-215ENST00000597901 CACNG2Q9Y698 323 aa12.81□□□□□ -0.36
LIG1-215ENST00000597901 RER1O15258 196 aa12.8□□□□□ -0.36
LIG1-215ENST00000597901 IDH3BO43837 385 aa12.8□□□□□ -0.36
LIG1-215ENST00000597901 GAAP10253 952 aa12.8□□□□□ -0.36
LIG1-215ENST00000597901 HIST1H1CP16403 213 aaKnown RBP12.8□□□□□ -0.36
LIG1-215ENST00000597901 HIST1H3AP68431 136 aa12.8□□□□□ -0.36
LIG1-215ENST00000597901 TSPAN31Q12999 210 aa12.8□□□□□ -0.36
LIG1-215ENST00000597901 CDK5R2Q13319 367 aa12.8□□□□□ -0.36
LIG1-215ENST00000597901 SPRNQ5BIV9 151 aa12.8□□□□□ -0.36
LIG1-215ENST00000597901 MTX3Q5HYI7 312 aa12.8□□□□□ -0.36
LIG1-215ENST00000597901 HIST2H3PS2Q5TEC6 136 aa12.8□□□□□ -0.36
LIG1-215ENST00000597901 LEG1Q6P5S2 330 aa12.8□□□□□ -0.36
LIG1-215ENST00000597901 DNM1P34Q6PK57 102 aa12.8□□□□□ -0.36
LIG1-215ENST00000597901 HIST2H3AQ71DI3 136 aa12.8□□□□□ -0.36
LIG1-215ENST00000597901 PHC2Q8IXK0 858 aa12.8□□□□□ -0.36
LIG1-215ENST00000597901 FANK1Q8TC84 345 aa12.8□□□□□ -0.36
LIG1-215ENST00000597901 HAVCR1Q96D42 359 aa12.8□□□□□ -0.36
LIG1-215ENST00000597901 DIRC2Q96SL1 478 aa12.8□□□□□ -0.36
LIG1-215ENST00000597901 EGLN1Q9GZT9 426 aa12.8□□□□□ -0.36
LIG1-215ENST00000597901 SAP30LQ9HAJ7 183 aa12.8□□□□□ -0.36
LIG1-215ENST00000597901 MSL2Q9HCI7 577 aa12.8□□□□□ -0.36
LIG1-215ENST00000597901 CGGBP1Q9UFW8 167 aaPredicted RBP12.8□□□□□ -0.36
LIG1-215ENST00000597901 IGLV1-36A0A0B4J1U3 117 aa12.79□□□□□ -0.36
LIG1-215ENST00000597901 OR6C6A6NF89 314 aa12.79□□□□□ -0.36
LIG1-215ENST00000597901 TNFRSF11BO00300 401 aa12.79□□□□□ -0.36
LIG1-215ENST00000597901 TIMM8AO60220 97 aaPredicted RBP12.79□□□□□ -0.36
LIG1-215ENST00000597901 UBOX5O94941 541 aa12.79□□□□□ -0.36
LIG1-215ENST00000597901 RENP00797 406 aa12.79□□□□□ -0.36
LIG1-215ENST00000597901 DBHP09172 617 aa12.79□□□□□ -0.36
LIG1-215ENST00000597901 GSTM3P21266 225 aa12.79□□□□□ -0.36
LIG1-215ENST00000597901 DBPQ10586 325 aaPredicted RBP12.79□□□□□ -0.36
LIG1-215ENST00000597901 MEP1BQ16820 701 aa12.79□□□□□ -0.36
LIG1-215ENST00000597901 PGBD2Q6P3X8 592 aa12.79□□□□□ -0.36
LIG1-215ENST00000597901 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.79□□□□□ -0.36
LIG1-215ENST00000597901 GLCCI1Q86VQ1 547 aa12.79□□□□□ -0.36
LIG1-215ENST00000597901 JAZF1Q86VZ6 243 aa12.79□□□□□ -0.36
LIG1-215ENST00000597901 NPEPL1Q8NDH3 523 aa12.79□□□□□ -0.36
LIG1-215ENST00000597901 GJC3Q8NFK1 279 aa12.79□□□□□ -0.36
LIG1-215ENST00000597901 RAB1CQ92928 201 aa12.79□□□□□ -0.36
LIG1-215ENST00000597901 TMEM186Q96B77 213 aa12.79□□□□□ -0.36
LIG1-215ENST00000597901 DCLRE1CQ96SD1 692 aaKnown RBP12.79□□□□□ -0.36
LIG1-215ENST00000597901 LPAR2Q9HBW0 351 aa12.79□□□□□ -0.36
LIG1-215ENST00000597901 HIF1ANQ9NWT6 349 aa12.79□□□□□ -0.36
LIG1-215ENST00000597901 PURGQ9UJV8 347 aaKnown RBP12.79□□□□□ -0.36
LIG1-215ENST00000597901 WIPI2Q9Y4P8 454 aa12.79□□□□□ -0.36
LIG1-215ENST00000597901 MALRD1Q5VYJ5 2156 aa12.79□□□□□ -0.36
LIG1-215ENST00000597901 OR6C68A6NDL8 312 aa12.78□□□□□ -0.36
LIG1-215ENST00000597901 CLDN25C9JDP6 229 aa12.78□□□□□ -0.36
LIG1-215ENST00000597901 GASTP01350 101 aa12.78□□□□□ -0.36
LIG1-215ENST00000597901 MSMBP08118 114 aa12.78□□□□□ -0.36
LIG1-215ENST00000597901 CD55P08174 381 aa12.78□□□□□ -0.36
LIG1-215ENST00000597901 T-ENOLP0DO92 83 aa12.78□□□□□ -0.36
LIG1-215ENST00000597901 ANPEPP15144 967 aa12.78□□□□□ -0.36
LIG1-215ENST00000597901 ATP6V1B2P21281 511 aa12.78□□□□□ -0.36
LIG1-215ENST00000597901 KITLGP21583 273 aa12.78□□□□□ -0.36
LIG1-215ENST00000597901 PCMT1P22061 227 aa12.78□□□□□ -0.36
LIG1-215ENST00000597901 NOS3P29474 1203 aa12.78□□□□□ -0.36
LIG1-215ENST00000597901 SRP14P37108 136 aaKnown RBP12.78□□□□□ -0.36
LIG1-215ENST00000597901 MS4A2Q01362 244 aa12.78□□□□□ -0.36
LIG1-215ENST00000597901 TRIM25Q14258 630 aaKnown RBP12.78□□□□□ -0.36
LIG1-215ENST00000597901 RSPO1Q2MKA7 263 aaPredicted RBP12.78□□□□□ -0.36
LIG1-215ENST00000597901 SLC35F1Q5T1Q4 408 aa12.78□□□□□ -0.36
LIG1-215ENST00000597901 ACSM5Q6NUN0 579 aa12.78□□□□□ -0.36
LIG1-215ENST00000597901 PGM2L1Q6PCE3 622 aa12.78□□□□□ -0.36
LIG1-215ENST00000597901 CORO6Q6QEF8 472 aa12.78□□□□□ -0.36
LIG1-215ENST00000597901 RINLQ6ZS11 566 aa12.78□□□□□ -0.36
LIG1-215ENST00000597901 ZBTB46Q86UZ6 589 aa12.78□□□□□ -0.36
LIG1-215ENST00000597901 ARHGAP24Q8N264 748 aa12.78□□□□□ -0.36
LIG1-215ENST00000597901 OR52E2Q8NGJ4 325 aa12.78□□□□□ -0.36
LIG1-215ENST00000597901 TIMD4Q96H15 378 aa12.78□□□□□ -0.36
LIG1-215ENST00000597901 COG8Q96MW5 612 aa12.78□□□□□ -0.36
LIG1-215ENST00000597901 DDOQ99489 341 aa12.78□□□□□ -0.36
LIG1-215ENST00000597901 TRIM15Q9C019 465 aa12.78□□□□□ -0.36
LIG1-215ENST00000597901 ZNF665Q9H7R5 613 aa12.78□□□□□ -0.36
LIG1-215ENST00000597901 RPRD1BQ9NQG5 326 aaKnown RBP12.78□□□□□ -0.36
LIG1-215ENST00000597901 LYVE1Q9Y5Y7 322 aa12.78□□□□□ -0.36
LIG1-215ENST00000597901 LHFPL6Q9Y693 200 aa12.78□□□□□ -0.36
LIG1-215ENST00000597901 ATRQ13535 2644 aa12.78□□□□□ -0.36
LIG1-215ENST00000597901 TCRBV5S2A0A599 114 aa12.77□□□□□ -0.37
LIG1-215ENST00000597901 FAM107AO95990 144 aa12.77□□□□□ -0.37
LIG1-215ENST00000597901 TNFAIP6P98066 277 aaPredicted RBP12.77□□□□□ -0.37
LIG1-215ENST00000597901 SLC3A1Q07837 685 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms