RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-205ENST00000597776 ZBED5Q49AG3 693 aa8.86□□□□□ -0.99
LSM4-205ENST00000597776 IFI44LQ53G44 452 aa8.86□□□□□ -0.99
LSM4-205ENST00000597776 LRRC28Q86X40 367 aaPredicted RBP8.86□□□□□ -0.99
LSM4-205ENST00000597776 SLC15A3Q8IY34 581 aa8.86□□□□□ -0.99
LSM4-205ENST00000597776 OR5AS1Q8N127 324 aa8.86□□□□□ -0.99
LSM4-205ENST00000597776 KLHL36Q8N4N3 616 aa8.86□□□□□ -0.99
LSM4-205ENST00000597776 SPICQ8N5J4 248 aa8.86□□□□□ -0.99
LSM4-205ENST00000597776 SGMS2Q8NHU3 365 aa8.86□□□□□ -0.99
LSM4-205ENST00000597776 FAM46AQ96IP4 442 aaKnown RBP8.86□□□□□ -0.99
LSM4-205ENST00000597776 HSH2DQ96JZ2 352 aa8.86□□□□□ -0.99
LSM4-205ENST00000597776 SAMD8Q96LT4 415 aa8.86□□□□□ -0.99
LSM4-205ENST00000597776 OR2V2Q96R30 315 aa8.86□□□□□ -0.99
LSM4-205ENST00000597776 NTN4Q9HB63 628 aa8.86□□□□□ -0.99
LSM4-205ENST00000597776 PATZ1Q9HBE1 687 aaKnown RBP8.86□□□□□ -0.99
LSM4-205ENST00000597776 MRGBPQ9NV56 204 aa8.86□□□□□ -0.99
LSM4-205ENST00000597776 PLEK2Q9NYT0 353 aa8.86□□□□□ -0.99
LSM4-205ENST00000597776 ASH2LQ9UBL3 628 aa8.86□□□□□ -0.99
LSM4-205ENST00000597776 PPP1R3CQ9UQK1 317 aa8.86□□□□□ -0.99
LSM4-205ENST00000597776 PCDHGB1Q9Y5G3 927 aa8.86□□□□□ -0.99
LSM4-205ENST00000597776 AUP1Q9Y679 476 aa8.86□□□□□ -0.99
LSM4-205ENST00000597776 CAPN7Q9Y6W3 813 aa8.86□□□□□ -0.99
LSM4-205ENST00000597776 PKD1L1Q8TDX9 2849 aa8.86□□□□□ -0.99
LSM4-205ENST00000597776 IGHV3OR16-10A0A075B7F0 116 aa8.85□□□□□ -0.99
LSM4-205ENST00000597776 IGHV3-64DA0A0J9YX35 117 aa8.85□□□□□ -0.99
LSM4-205ENST00000597776 OR6C6A6NF89 314 aa8.85□□□□□ -0.99
LSM4-205ENST00000597776 DNAJC9-AS1A6NH13 148 aa8.85□□□□□ -0.99
LSM4-205ENST00000597776 F5H0A9 414 aaPredicted RBP8.85□□□□□ -0.99
LSM4-205ENST00000597776 CXCR6O00574 342 aa8.85□□□□□ -0.99
LSM4-205ENST00000597776 NME4O00746 187 aa8.85□□□□□ -0.99
LSM4-205ENST00000597776 SOCS2O14508 198 aa8.85□□□□□ -0.99
LSM4-205ENST00000597776 SLC16A7O60669 478 aa8.85□□□□□ -0.99
LSM4-205ENST00000597776 ZNF205O95201 554 aa8.85□□□□□ -0.99
LSM4-205ENST00000597776 GPANK1O95872 356 aa8.85□□□□□ -0.99
LSM4-205ENST00000597776 SERPINA1P01009 418 aa8.85□□□□□ -0.99
LSM4-205ENST00000597776 H2AFXP16104 143 aaPredicted RBP8.85□□□□□ -0.99
LSM4-205ENST00000597776 ZNF12P17014 697 aa8.85□□□□□ -0.99
LSM4-205ENST00000597776 TNFRSF1AP19438 455 aa8.85□□□□□ -0.99
LSM4-205ENST00000597776 MMP16P51512 607 aa8.85□□□□□ -0.99
LSM4-205ENST00000597776 DBPQ10586 325 aaPredicted RBP8.85□□□□□ -0.99
LSM4-205ENST00000597776 AQP6Q13520 282 aa8.85□□□□□ -0.99
LSM4-205ENST00000597776 TUSC1Q2TAM9 212 aa8.85□□□□□ -0.99
LSM4-205ENST00000597776 ANKDD1AQ495B1 522 aa8.85□□□□□ -0.99
LSM4-205ENST00000597776 TMEM155Q4W5P6 130 aa8.85□□□□□ -0.99
LSM4-205ENST00000597776 RBMS3Q6XE24 437 aaKnown RBP8.85□□□□□ -0.99
LSM4-205ENST00000597776 TMPRSS11FQ6ZWK6 438 aa8.85□□□□□ -0.99
LSM4-205ENST00000597776 FKBP9P1Q75LS8 142 aa8.85□□□□□ -0.99
LSM4-205ENST00000597776 DOK3Q7L591 496 aa8.85□□□□□ -0.99
LSM4-205ENST00000597776 TSEN54Q7Z6J9 526 aaKnown RBP8.85□□□□□ -0.99
LSM4-205ENST00000597776 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.85□□□□□ -0.99
LSM4-205ENST00000597776 GLB1L2Q8IW92 636 aa8.85□□□□□ -0.99
LSM4-205ENST00000597776 RNF113BQ8IZP6 322 aaKnown RBP8.85□□□□□ -0.99
LSM4-205ENST00000597776 ATG16L2Q8NAA4 619 aa8.85□□□□□ -0.99
LSM4-205ENST00000597776 FAM156AQ8NDB6 213 aa8.85□□□□□ -0.99
LSM4-205ENST00000597776 OR10AD1Q8NGE0 317 aa8.85□□□□□ -0.99
LSM4-205ENST00000597776 POP5Q969H6 163 aaKnown RBP8.85□□□□□ -0.99
LSM4-205ENST00000597776 HAVCR1Q96D42 359 aa8.85□□□□□ -0.99
LSM4-205ENST00000597776 C1orf147Q96MC9 270 aaPredicted RBP8.85□□□□□ -0.99
LSM4-205ENST00000597776 ZNF48Q96MX3 618 aaPredicted RBP8.85□□□□□ -0.99
LSM4-205ENST00000597776 SYT4Q9H2B2 425 aa8.85□□□□□ -0.99
LSM4-205ENST00000597776 NMNAT1Q9HAN9 279 aaPredicted RBP8.85□□□□□ -0.99
LSM4-205ENST00000597776 PTTG3PQ9NZH4 202 aa8.85□□□□□ -0.99
LSM4-205ENST00000597776 IL19Q9UHD0 177 aa8.85□□□□□ -0.99
LSM4-205ENST00000597776 IL20RAQ9UHF4 553 aa8.85□□□□□ -0.99
LSM4-205ENST00000597776 NUP50Q9UKX7 468 aa8.85□□□□□ -0.99
LSM4-205ENST00000597776 COA3Q9Y2R0 106 aaPredicted RBP8.85□□□□□ -0.99
LSM4-205ENST00000597776 INSIG2Q9Y5U4 225 aa8.85□□□□□ -0.99
LSM4-205ENST00000597776 SOX21Q9Y651 276 aaPredicted RBP8.85□□□□□ -0.99
LSM4-205ENST00000597776 CEACAM18A8MTB9 384 aa8.84□□□□□ -0.99
LSM4-205ENST00000597776 A8MXK9 166 aa8.84□□□□□ -0.99
LSM4-205ENST00000597776 TMEM178BH3BS89 294 aa8.84□□□□□ -0.99
LSM4-205ENST00000597776 GSTA4O15217 222 aa8.84□□□□□ -0.99
LSM4-205ENST00000597776 RER1O15258 196 aa8.84□□□□□ -0.99
LSM4-205ENST00000597776 SURF4O15260 269 aa8.84□□□□□ -0.99
LSM4-205ENST00000597776 AHCYL1O43865 530 aa8.84□□□□□ -0.99
LSM4-205ENST00000597776 CYB5R3P00387 301 aaPredicted RBP8.84□□□□□ -0.99
LSM4-205ENST00000597776 HKR1P10072 659 aa8.84□□□□□ -0.99
LSM4-205ENST00000597776 NCK1P16333 377 aa8.84□□□□□ -0.99
LSM4-205ENST00000597776 MDH2P40926 338 aaKnown RBP8.84□□□□□ -0.99
LSM4-205ENST00000597776 GSK3BP49841 420 aa8.84□□□□□ -0.99
LSM4-205ENST00000597776 SLC7A2P52569 658 aa8.84□□□□□ -0.99
LSM4-205ENST00000597776 GUCY1A3Q02108 690 aa8.84□□□□□ -0.99
LSM4-205ENST00000597776 MEP1BQ16820 701 aa8.84□□□□□ -0.99
LSM4-205ENST00000597776 CCDC92Q53HC0 331 aaPredicted RBP8.84□□□□□ -0.99
LSM4-205ENST00000597776 ESCO2Q56NI9 601 aa8.84□□□□□ -0.99
LSM4-205ENST00000597776 FGD3Q5JSP0 725 aa8.84□□□□□ -0.99
LSM4-205ENST00000597776 OR2T2Q6IF00 324 aa8.84□□□□□ -0.99
LSM4-205ENST00000597776 PTCHD4Q6ZW05 846 aa8.84□□□□□ -0.99
LSM4-205ENST00000597776 CBLL1Q75N03 491 aa8.84□□□□□ -0.99
LSM4-205ENST00000597776 ARPINQ7Z6K5 226 aa8.84□□□□□ -0.99
LSM4-205ENST00000597776 JAZF1Q86VZ6 243 aa8.84□□□□□ -0.99
LSM4-205ENST00000597776 OR1F12Q8NHA8 337 aa8.84□□□□□ -0.99
LSM4-205ENST00000597776 ZNF420Q8TAQ5 688 aaPredicted RBP8.84□□□□□ -0.99
LSM4-205ENST00000597776 SLC7A13Q8TCU3 470 aa8.84□□□□□ -0.99
LSM4-205ENST00000597776 TAF15Q92804 592 aaKnown RBP eCLIP8.84□□□□□ -0.99
LSM4-205ENST00000597776 WACQ9BTA9 647 aa8.84□□□□□ -0.99
LSM4-205ENST00000597776 MRI1Q9BV20 369 aa8.84□□□□□ -0.99
LSM4-205ENST00000597776 WDR76Q9H967 626 aa8.84□□□□□ -0.99
LSM4-205ENST00000597776 GCM1Q9NP62 436 aa8.84□□□□□ -0.99
LSM4-205ENST00000597776 SIGLEC7Q9Y286 467 aa8.84□□□□□ -0.99
LSM4-205ENST00000597776 POLR3KQ9Y2Y1 108 aaPredicted RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms