RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 PPIAL4EA0A075B759 164 aa13.51□□□□□ -0.25
LIM2-202ENST00000596399 PPIAL4CA0A0B4J2A2 164 aa13.51□□□□□ -0.25
LIM2-202ENST00000596399 DNAJC9-AS1A6NH13 148 aa13.51□□□□□ -0.25
LIM2-202ENST00000596399 PPIAL4DF5H284 164 aa13.51□□□□□ -0.25
LIM2-202ENST00000596399 H0YL77 283 aa13.51□□□□□ -0.25
LIM2-202ENST00000596399 TMPRSS2O15393 492 aa13.51□□□□□ -0.25
LIM2-202ENST00000596399 CD14P08571 375 aa13.51□□□□□ -0.25
LIM2-202ENST00000596399 PPIAL4FP0DN26 164 aa13.51□□□□□ -0.25
LIM2-202ENST00000596399 COX5BP10606 129 aa13.51□□□□□ -0.25
LIM2-202ENST00000596399 ZNF12P17014 697 aa13.51□□□□□ -0.25
LIM2-202ENST00000596399 ZBED5Q49AG3 693 aa13.51□□□□□ -0.25
LIM2-202ENST00000596399 MBOAT2Q6ZWT7 520 aa13.51□□□□□ -0.25
LIM2-202ENST00000596399 FAM122BQ7Z309 247 aa13.51□□□□□ -0.25
LIM2-202ENST00000596399 KLHL36Q8N4N3 616 aa13.51□□□□□ -0.25
LIM2-202ENST00000596399 PCYOX1LQ8NBM8 494 aa13.51□□□□□ -0.25
LIM2-202ENST00000596399 OR10AD1Q8NGE0 317 aa13.51□□□□□ -0.25
LIM2-202ENST00000596399 ZNF420Q8TAQ5 688 aaPredicted RBP13.51□□□□□ -0.25
LIM2-202ENST00000596399 ACOT11Q8WXI4 607 aaPredicted RBP13.51□□□□□ -0.25
LIM2-202ENST00000596399 POP5Q969H6 163 aaKnown RBP13.51□□□□□ -0.25
LIM2-202ENST00000596399 HAVCR1Q96D42 359 aa13.51□□□□□ -0.25
LIM2-202ENST00000596399 ZNF570Q96NI8 536 aa13.51□□□□□ -0.25
LIM2-202ENST00000596399 PLEK2Q9NYT0 353 aa13.51□□□□□ -0.25
LIM2-202ENST00000596399 ASH2LQ9UBL3 628 aa13.51□□□□□ -0.25
LIM2-202ENST00000596399 COA3Q9Y2R0 106 aaPredicted RBP13.51□□□□□ -0.25
LIM2-202ENST00000596399 INSIG2Q9Y5U4 225 aa13.51□□□□□ -0.25
LIM2-202ENST00000596399 TEX13CA0A0J9YWL9 993 aa13.5□□□□□ -0.25
LIM2-202ENST00000596399 PRSS37A4D1T9 235 aa13.5□□□□□ -0.25
LIM2-202ENST00000596399 HTR3EA5X5Y0 456 aa13.5□□□□□ -0.25
LIM2-202ENST00000596399 F5H0A9 414 aaPredicted RBP13.5□□□□□ -0.25
LIM2-202ENST00000596399 CXCR6O00574 342 aa13.5□□□□□ -0.25
LIM2-202ENST00000596399 RER1O15258 196 aa13.5□□□□□ -0.25
LIM2-202ENST00000596399 SLC16A7O60669 478 aa13.5□□□□□ -0.25
LIM2-202ENST00000596399 CYB5R3P00387 301 aaPredicted RBP13.5□□□□□ -0.25
LIM2-202ENST00000596399 HKR1P10072 659 aa13.5□□□□□ -0.25
LIM2-202ENST00000596399 TROVE2P10155 538 aaKnown RBP eCLIP13.5□□□□□ -0.25
LIM2-202ENST00000596399 TNFRSF1AP19438 455 aa13.5□□□□□ -0.25
LIM2-202ENST00000596399 TNFSF4P23510 183 aa13.5□□□□□ -0.25
LIM2-202ENST00000596399 IFNA8P32881 189 aa13.5□□□□□ -0.25
LIM2-202ENST00000596399 CD80P33681 288 aa13.5□□□□□ -0.25
LIM2-202ENST00000596399 MMP16P51512 607 aa13.5□□□□□ -0.25
LIM2-202ENST00000596399 PRSS12P56730 875 aa13.5□□□□□ -0.25
LIM2-202ENST00000596399 LIPEQ05469 1076 aa13.5□□□□□ -0.25
LIM2-202ENST00000596399 SCRN3Q0VDG4 424 aa13.5□□□□□ -0.25
LIM2-202ENST00000596399 MAPRE2Q15555 327 aa13.5□□□□□ -0.25
LIM2-202ENST00000596399 TMEM155Q4W5P6 130 aa13.5□□□□□ -0.25
LIM2-202ENST00000596399 CCDC92Q53HC0 331 aaPredicted RBP13.5□□□□□ -0.25
LIM2-202ENST00000596399 OR2T2Q6IF00 324 aa13.5□□□□□ -0.25
LIM2-202ENST00000596399 RBMS3Q6XE24 437 aaKnown RBP13.5□□□□□ -0.25
LIM2-202ENST00000596399 TMPRSS11FQ6ZWK6 438 aa13.5□□□□□ -0.25
LIM2-202ENST00000596399 DOK3Q7L591 496 aa13.5□□□□□ -0.25
LIM2-202ENST00000596399 ZER1Q7Z7L7 766 aa13.5□□□□□ -0.25
LIM2-202ENST00000596399 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.5□□□□□ -0.25
LIM2-202ENST00000596399 SLC15A3Q8IY34 581 aa13.5□□□□□ -0.25
LIM2-202ENST00000596399 SPICQ8N5J4 248 aa13.5□□□□□ -0.25
LIM2-202ENST00000596399 ATG16L2Q8NAA4 619 aa13.5□□□□□ -0.25
LIM2-202ENST00000596399 NPEPL1Q8NDH3 523 aa13.5□□□□□ -0.25
LIM2-202ENST00000596399 LZICQ8WZA0 190 aa13.5□□□□□ -0.25
LIM2-202ENST00000596399 FAM46AQ96IP4 442 aaKnown RBP13.5□□□□□ -0.25
LIM2-202ENST00000596399 HSH2DQ96JZ2 352 aa13.5□□□□□ -0.25
LIM2-202ENST00000596399 ZNF747Q9BV97 191 aa13.5□□□□□ -0.25
LIM2-202ENST00000596399 SYT4Q9H2B2 425 aa13.5□□□□□ -0.25
LIM2-202ENST00000596399 GCM1Q9NP62 436 aa13.5□□□□□ -0.25
LIM2-202ENST00000596399 PTTG3PQ9NZH4 202 aa13.5□□□□□ -0.25
LIM2-202ENST00000596399 IL19Q9UHD0 177 aa13.5□□□□□ -0.25
LIM2-202ENST00000596399 POLR3KQ9Y2Y1 108 aaPredicted RBP13.5□□□□□ -0.25
LIM2-202ENST00000596399 OR6C6A6NF89 314 aa13.49□□□□□ -0.25
LIM2-202ENST00000596399 CEACAM18A8MTB9 384 aa13.49□□□□□ -0.25
LIM2-202ENST00000596399 TMEM178BH3BS89 294 aa13.49□□□□□ -0.25
LIM2-202ENST00000596399 NME4O00746 187 aa13.49□□□□□ -0.25
LIM2-202ENST00000596399 XKRYO14609 159 aa13.49□□□□□ -0.25
LIM2-202ENST00000596399 SERPINA1P01009 418 aa13.49□□□□□ -0.25
LIM2-202ENST00000596399 IGHV4-38-2P0DP08 117 aa13.49□□□□□ -0.25
LIM2-202ENST00000596399 NCK1P16333 377 aa13.49□□□□□ -0.25
LIM2-202ENST00000596399 SELEP16581 610 aa13.49□□□□□ -0.25
LIM2-202ENST00000596399 PRTN3P24158 256 aa13.49□□□□□ -0.25
LIM2-202ENST00000596399 BAMBIQ13145 260 aa13.49□□□□□ -0.25
LIM2-202ENST00000596399 KRR1Q13601 381 aaKnown RBP13.49□□□□□ -0.25
LIM2-202ENST00000596399 MEP1BQ16820 701 aa13.49□□□□□ -0.25
LIM2-202ENST00000596399 PTCHD4Q6ZW05 846 aa13.49□□□□□ -0.25
LIM2-202ENST00000596399 FKBP9P1Q75LS8 142 aa13.49□□□□□ -0.25
LIM2-202ENST00000596399 CBLL1Q75N03 491 aa13.49□□□□□ -0.25
LIM2-202ENST00000596399 RNF113BQ8IZP6 322 aaKnown RBP13.49□□□□□ -0.25
LIM2-202ENST00000596399 OR1F12Q8NHA8 337 aa13.49□□□□□ -0.25
LIM2-202ENST00000596399 SLC7A13Q8TCU3 470 aa13.49□□□□□ -0.25
LIM2-202ENST00000596399 PTP4A1Q93096 173 aa13.49□□□□□ -0.25
LIM2-202ENST00000596399 TSSK2Q96PF2 358 aa13.49□□□□□ -0.25
LIM2-202ENST00000596399 WDR76Q9H967 626 aa13.49□□□□□ -0.25
LIM2-202ENST00000596399 VIPAS39Q9H9C1 493 aa13.49□□□□□ -0.25
LIM2-202ENST00000596399 NMNAT1Q9HAN9 279 aaPredicted RBP13.49□□□□□ -0.25
LIM2-202ENST00000596399 SOCS2O14508 198 aa13.48□□□□□ -0.25
LIM2-202ENST00000596399 PTP4A3O75365 173 aa13.48□□□□□ -0.25
LIM2-202ENST00000596399 MDH2P40926 338 aaKnown RBP13.48□□□□□ -0.25
LIM2-202ENST00000596399 FXYD6P3P58550 94 aa13.48□□□□□ -0.25
LIM2-202ENST00000596399 HOXA4Q00056 320 aaPredicted RBP13.48□□□□□ -0.25
LIM2-202ENST00000596399 GUCY1A3Q02108 690 aa13.48□□□□□ -0.25
LIM2-202ENST00000596399 FOXL1Q12952 345 aa13.48□□□□□ -0.25
LIM2-202ENST00000596399 AQP6Q13520 282 aa13.48□□□□□ -0.25
LIM2-202ENST00000596399 ANKDD1AQ495B1 522 aa13.48□□□□□ -0.25
LIM2-202ENST00000596399 IFI44LQ53G44 452 aa13.48□□□□□ -0.25
LIM2-202ENST00000596399 FAM201AQ5SY85 155 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms