RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 SLC30A7Q8NEW0 376 aa9.12□□□□□ -0.95
LIG1-210ENST00000596332 OR6K6Q8NGW6 343 aa9.12□□□□□ -0.95
LIG1-210ENST00000596332 OR1F12Q8NHA8 337 aa9.12□□□□□ -0.95
LIG1-210ENST00000596332 OTOSQ8NHW6 89 aa9.12□□□□□ -0.95
LIG1-210ENST00000596332 TMEM171Q8WVE6 324 aa9.12□□□□□ -0.95
LIG1-210ENST00000596332 RNF133Q8WVZ7 376 aa9.12□□□□□ -0.95
LIG1-210ENST00000596332 NANOS1Q8WY41 292 aaKnown RBP9.12□□□□□ -0.95
LIG1-210ENST00000596332 OTULINQ96BN8 352 aa9.12□□□□□ -0.95
LIG1-210ENST00000596332 ABHD6Q9BV23 337 aa9.12□□□□□ -0.95
LIG1-210ENST00000596332 CLEC4MQ9H2X3 399 aaPredicted RBP9.12□□□□□ -0.95
LIG1-210ENST00000596332 RNF121Q9H920 327 aa9.12□□□□□ -0.95
LIG1-210ENST00000596332 NGBQ9NPG2 151 aa9.12□□□□□ -0.95
LIG1-210ENST00000596332 DDX28Q9NUL7 540 aaKnown RBP9.12□□□□□ -0.95
LIG1-210ENST00000596332 MRPS18AQ9NVS2 196 aaKnown RBP9.12□□□□□ -0.95
LIG1-210ENST00000596332 RNF115Q9Y4L5 304 aa9.12□□□□□ -0.95
LIG1-210ENST00000596332 PCDHGB5Q9Y5G0 923 aa9.12□□□□□ -0.95
LIG1-210ENST00000596332 ORC6Q9Y5N6 252 aa9.12□□□□□ -0.95
LIG1-210ENST00000596332 RAB36O95755 333 aa9.11□□□□□ -0.95
LIG1-210ENST00000596332 HLA-DQA2P01906 255 aa9.11□□□□□ -0.95
LIG1-210ENST00000596332 CD3EP07766 207 aa9.11□□□□□ -0.95
LIG1-210ENST00000596332 SBK2P0C263 348 aa9.11□□□□□ -0.95
LIG1-210ENST00000596332 PAICSP22234 425 aaKnown RBP9.11□□□□□ -0.95
LIG1-210ENST00000596332 HOXC12P31275 282 aa9.11□□□□□ -0.95
LIG1-210ENST00000596332 CAPGP40121 348 aa9.11□□□□□ -0.95
LIG1-210ENST00000596332 GUCA1AP43080 201 aaPredicted RBP9.11□□□□□ -0.95
LIG1-210ENST00000596332 BLVRAP53004 296 aa9.11□□□□□ -0.95
LIG1-210ENST00000596332 PCBD1P61457 104 aa9.11□□□□□ -0.95
LIG1-210ENST00000596332 ERVS71-1P61550 626 aa9.11□□□□□ -0.95
LIG1-210ENST00000596332 CDK5R2Q13319 367 aa9.11□□□□□ -0.95
LIG1-210ENST00000596332 RAB35Q15286 201 aa9.11□□□□□ -0.95
LIG1-210ENST00000596332 ELFN2Q5R3F8 820 aa9.11□□□□□ -0.95
LIG1-210ENST00000596332 C6orf52Q5T4I8 152 aa9.11□□□□□ -0.95
LIG1-210ENST00000596332 TTC23Q5W5X9 447 aa9.11□□□□□ -0.95
LIG1-210ENST00000596332 SSX6Q7RTT6 188 aa9.11□□□□□ -0.95
LIG1-210ENST00000596332 SLC16A9Q7RTY1 509 aa9.11□□□□□ -0.95
LIG1-210ENST00000596332 DCXRQ7Z4W1 244 aa9.11□□□□□ -0.95
LIG1-210ENST00000596332 ERI1Q8IV48 349 aaKnown RBP9.11□□□□□ -0.95
LIG1-210ENST00000596332 NUP37Q8NFH4 326 aa9.11□□□□□ -0.95
LIG1-210ENST00000596332 GJC3Q8NFK1 279 aa9.11□□□□□ -0.95
LIG1-210ENST00000596332 OR4F15Q8NGB8 312 aa9.11□□□□□ -0.95
LIG1-210ENST00000596332 CNIH3Q8TBE1 160 aa9.11□□□□□ -0.95
LIG1-210ENST00000596332 AKAP1Q92667 903 aaKnown RBP eCLIP9.11□□□□□ -0.95
LIG1-210ENST00000596332 PLEKHA8Q96JA3 519 aa9.11□□□□□ -0.95
LIG1-210ENST00000596332 INTS14Q96SY0 518 aa9.11□□□□□ -0.95
LIG1-210ENST00000596332 RHNO1Q9BSD3 238 aa9.11□□□□□ -0.95
LIG1-210ENST00000596332 POFUT1Q9H488 388 aa9.11□□□□□ -0.95
LIG1-210ENST00000596332 MOV10Q9HCE1 1003 aaKnown RBP9.11□□□□□ -0.95
LIG1-210ENST00000596332 CCNB1IP1Q9NPC3 277 aa9.11□□□□□ -0.95
LIG1-210ENST00000596332 ZNF319Q9P2F9 582 aa9.11□□□□□ -0.95
LIG1-210ENST00000596332 WARS2Q9UGM6 360 aaKnown RBP9.11□□□□□ -0.95
LIG1-210ENST00000596332 ATPIF1Q9UII2 106 aa9.11□□□□□ -0.95
LIG1-210ENST00000596332 EXOGQ9Y2C4 368 aaKnown RBP9.11□□□□□ -0.95
LIG1-210ENST00000596332 SPG11Q96JI7 2443 aa9.11□□□□□ -0.95
LIG1-210ENST00000596332 C5orf49A4QMS7 147 aa9.1□□□□□ -0.95
LIG1-210ENST00000596332 HS3ST1O14792 307 aa9.1□□□□□ -0.95
LIG1-210ENST00000596332 MAGEB4O15481 346 aaPredicted RBP9.1□□□□□ -0.95
LIG1-210ENST00000596332 GPRIN2O60269 458 aa9.1□□□□□ -0.95
LIG1-210ENST00000596332 DOK2O60496 412 aa9.1□□□□□ -0.95
LIG1-210ENST00000596332 SRSF10O75494 262 aaKnown RBP9.1□□□□□ -0.95
LIG1-210ENST00000596332 APOL3O95236 402 aa9.1□□□□□ -0.95
LIG1-210ENST00000596332 SOD3P08294 240 aa9.1□□□□□ -0.95
LIG1-210ENST00000596332 MRPL3P09001 348 aaKnown RBP9.1□□□□□ -0.95
LIG1-210ENST00000596332 ACSM4P0C7M7 580 aa9.1□□□□□ -0.95
LIG1-210ENST00000596332 ZNF823P16415 610 aa9.1□□□□□ -0.95
LIG1-210ENST00000596332 PCSK6P29122 969 aa9.1□□□□□ -0.95
LIG1-210ENST00000596332 THBS4P35443 961 aa9.1□□□□□ -0.95
LIG1-210ENST00000596332 OPRL1P41146 370 aa9.1□□□□□ -0.95
LIG1-210ENST00000596332 NAA10P41227 235 aaPredicted RBP9.1□□□□□ -0.95
LIG1-210ENST00000596332 NUDT6P53370 316 aa9.1□□□□□ -0.95
LIG1-210ENST00000596332 CDH11P55287 796 aa9.1□□□□□ -0.95
LIG1-210ENST00000596332 UCP2P55851 309 aa9.1□□□□□ -0.95
LIG1-210ENST00000596332 ZNF85Q03923 595 aa9.1□□□□□ -0.95
LIG1-210ENST00000596332 SCRN3Q0VDG4 424 aa9.1□□□□□ -0.95
LIG1-210ENST00000596332 TMED1Q13445 227 aa9.1□□□□□ -0.95
LIG1-210ENST00000596332 ADIPOQQ15848 244 aa9.1□□□□□ -0.95
LIG1-210ENST00000596332 SWI5Q1ZZU3 235 aa9.1□□□□□ -0.95
LIG1-210ENST00000596332 C11orf71Q6IPW1 123 aa9.1□□□□□ -0.95
LIG1-210ENST00000596332 TMEM154Q6P9G4 183 aa9.1□□□□□ -0.95
LIG1-210ENST00000596332 RHOUQ7L0Q8 258 aa9.1□□□□□ -0.95
LIG1-210ENST00000596332 LRP11Q86VZ4 500 aa9.1□□□□□ -0.95
LIG1-210ENST00000596332 ZNF611Q8N823 705 aa9.1□□□□□ -0.95
LIG1-210ENST00000596332 IL17RDQ8NFM7 739 aa9.1□□□□□ -0.95
LIG1-210ENST00000596332 OR6N2Q8NGY6 317 aa9.1□□□□□ -0.95
LIG1-210ENST00000596332 CYGBQ8WWM9 190 aa9.1□□□□□ -0.95
LIG1-210ENST00000596332 LGALS12Q96DT0 336 aa9.1□□□□□ -0.95
LIG1-210ENST00000596332 SLAMF6Q96DU3 332 aa9.1□□□□□ -0.95
LIG1-210ENST00000596332 LURAP1Q96LR2 239 aa9.1□□□□□ -0.95
LIG1-210ENST00000596332 COQ7Q99807 217 aa9.1□□□□□ -0.95
LIG1-210ENST00000596332 TEX12Q9BXU0 123 aa9.1□□□□□ -0.95
LIG1-210ENST00000596332 PRRG3Q9BZD7 231 aa9.1□□□□□ -0.95
LIG1-210ENST00000596332 YIPF3Q9GZM5 350 aa9.1□□□□□ -0.95
LIG1-210ENST00000596332 KCNN2Q9H2S1 579 aa9.1□□□□□ -0.95
LIG1-210ENST00000596332 AMBNQ9NP70 447 aa9.1□□□□□ -0.95
LIG1-210ENST00000596332 PLEK2Q9NYT0 353 aa9.1□□□□□ -0.95
LIG1-210ENST00000596332 CISD1Q9NZ45 108 aaKnown RBP9.1□□□□□ -0.95
LIG1-210ENST00000596332 FBXL3Q9UKT7 428 aa9.1□□□□□ -0.95
LIG1-210ENST00000596332 MYRFQ9Y2G1 1151 aa9.1□□□□□ -0.95
LIG1-210ENST00000596332 STARD10Q9Y365 291 aa9.1□□□□□ -0.95
LIG1-210ENST00000596332 PLCE1Q9P212 2302 aa9.09□□□□□ -0.95
LIG1-210ENST00000596332 IQCMA0A1B0GVH7 501 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms