RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 NOS3P29474 1203 aa11.13□□□□□ -0.63
USE1-207ENST00000596136 GCH1P30793 250 aa11.13□□□□□ -0.63
USE1-207ENST00000596136 LIPAP38571 399 aa11.13□□□□□ -0.63
USE1-207ENST00000596136 MPV17P39210 176 aa11.13□□□□□ -0.63
USE1-207ENST00000596136 MAGEB1P43366 347 aa11.13□□□□□ -0.63
USE1-207ENST00000596136 HTR5AP47898 357 aa11.13□□□□□ -0.63
USE1-207ENST00000596136 ARHGDIAP52565 204 aa11.13□□□□□ -0.63
USE1-207ENST00000596136 PPP1CBP62140 327 aa11.13□□□□□ -0.63
USE1-207ENST00000596136 GLO1Q04760 184 aa11.13□□□□□ -0.63
USE1-207ENST00000596136 COX10Q12887 443 aa11.13□□□□□ -0.63
USE1-207ENST00000596136 DNAL1Q4LDG9 190 aa11.13□□□□□ -0.63
USE1-207ENST00000596136 TMEM154Q6P9G4 183 aa11.13□□□□□ -0.63
USE1-207ENST00000596136 CD300LDQ6UXZ3 194 aa11.13□□□□□ -0.63
USE1-207ENST00000596136 LNX2Q8N448 690 aa11.13□□□□□ -0.63
USE1-207ENST00000596136 GJC3Q8NFK1 279 aa11.13□□□□□ -0.63
USE1-207ENST00000596136 OR8D4Q8NGM9 314 aa11.13□□□□□ -0.63
USE1-207ENST00000596136 OR1F12Q8NHA8 337 aa11.13□□□□□ -0.63
USE1-207ENST00000596136 ABHD4Q8TB40 342 aa11.13□□□□□ -0.63
USE1-207ENST00000596136 SNX33Q8WV41 574 aa11.13□□□□□ -0.63
USE1-207ENST00000596136 IPCEF1Q8WWN9 437 aaPredicted RBP11.13□□□□□ -0.63
USE1-207ENST00000596136 YIPF5Q969M3 257 aa11.13□□□□□ -0.63
USE1-207ENST00000596136 CCDC124Q96CT7 223 aaKnown RBP11.13□□□□□ -0.63
USE1-207ENST00000596136 MSI2Q96DH6 328 aaKnown RBP11.13□□□□□ -0.63
USE1-207ENST00000596136 LRGUKQ96M69 825 aa11.13□□□□□ -0.63
USE1-207ENST00000596136 DCLRE1CQ96SD1 692 aaKnown RBP11.13□□□□□ -0.63
USE1-207ENST00000596136 CHID1Q9BWS9 393 aa11.13□□□□□ -0.63
USE1-207ENST00000596136 PLA2G12AQ9BZM1 189 aa11.13□□□□□ -0.63
USE1-207ENST00000596136 RERGLQ9H628 205 aa11.13□□□□□ -0.63
USE1-207ENST00000596136 REEP1Q9H902 201 aa11.13□□□□□ -0.63
USE1-207ENST00000596136 PLEK2Q9NYT0 353 aa11.13□□□□□ -0.63
USE1-207ENST00000596136 CGGBP1Q9UFW8 167 aaPredicted RBP11.13□□□□□ -0.63
USE1-207ENST00000596136 SAMHD1Q9Y3Z3 626 aaKnown RBP11.13□□□□□ -0.63
USE1-207ENST00000596136 LHFPL6Q9Y693 200 aa11.13□□□□□ -0.63
USE1-207ENST00000596136 RER1O15258 196 aa11.12□□□□□ -0.63
USE1-207ENST00000596136 GYG2O15488 501 aa11.12□□□□□ -0.63
USE1-207ENST00000596136 ABHD16AO95870 558 aa11.12□□□□□ -0.63
USE1-207ENST00000596136 GPANK1O95872 356 aa11.12□□□□□ -0.63
USE1-207ENST00000596136 MT-ND5P03915 603 aa11.12□□□□□ -0.63
USE1-207ENST00000596136 GSTM3P21266 225 aa11.12□□□□□ -0.63
USE1-207ENST00000596136 CRYBB2P43320 205 aa11.12□□□□□ -0.63
USE1-207ENST00000596136 CHN2P52757 468 aa11.12□□□□□ -0.63
USE1-207ENST00000596136 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.12□□□□□ -0.63
USE1-207ENST00000596136 PPP1R8Q12972 351 aaKnown RBP11.12□□□□□ -0.63
USE1-207ENST00000596136 RSPO1Q2MKA7 263 aaPredicted RBP11.12□□□□□ -0.63
USE1-207ENST00000596136 ALKBH6Q3KRA9 238 aa11.12□□□□□ -0.63
USE1-207ENST00000596136 KRTAP27-1Q3LI81 207 aa11.12□□□□□ -0.63
USE1-207ENST00000596136 FAM209AQ5JX71 171 aa11.12□□□□□ -0.63
USE1-207ENST00000596136 SPATA46Q5T0L3 261 aa11.12□□□□□ -0.63
USE1-207ENST00000596136 OTPQ5XKR4 325 aa11.12□□□□□ -0.63
USE1-207ENST00000596136 AQP11Q8NBQ7 271 aa11.12□□□□□ -0.63
USE1-207ENST00000596136 ICA1LQ8NDH6 482 aa11.12□□□□□ -0.63
USE1-207ENST00000596136 SDR9C7Q8NEX9 313 aa11.12□□□□□ -0.63
USE1-207ENST00000596136 OR52L1Q8NGH7 329 aa11.12□□□□□ -0.63
USE1-207ENST00000596136 OR52E2Q8NGJ4 325 aa11.12□□□□□ -0.63
USE1-207ENST00000596136 CANT1Q8WVQ1 401 aa11.12□□□□□ -0.63
USE1-207ENST00000596136 COG8Q96MW5 612 aa11.12□□□□□ -0.63
USE1-207ENST00000596136 COQ7Q99807 217 aa11.12□□□□□ -0.63
USE1-207ENST00000596136 HDHD2Q9H0R4 259 aa11.12□□□□□ -0.63
USE1-207ENST00000596136 RPRD1BQ9NQG5 326 aaKnown RBP11.12□□□□□ -0.63
USE1-207ENST00000596136 CYSLTR2Q9NS75 346 aa11.12□□□□□ -0.63
USE1-207ENST00000596136 BAIAP2Q9UQB8 552 aa11.12□□□□□ -0.63
USE1-207ENST00000596136 CUBNO60494 3623 aa11.11□□□□□ -0.63
USE1-207ENST00000596136 MXRA5Q9NR99 2828 aa11.11□□□□□ -0.63
USE1-207ENST00000596136 DHRS12A0PJE2 317 aa11.11□□□□□ -0.63
USE1-207ENST00000596136 LRP5LA4QPB2 252 aa11.11□□□□□ -0.63
USE1-207ENST00000596136 ARRDC5A6NEK1 342 aa11.11□□□□□ -0.63
USE1-207ENST00000596136 KITLGP21583 273 aa11.11□□□□□ -0.63
USE1-207ENST00000596136 GGT2P36268 569 aa11.11□□□□□ -0.63
USE1-207ENST00000596136 RGS6P49758 472 aa11.11□□□□□ -0.63
USE1-207ENST00000596136 ZNF81P51508 661 aa11.11□□□□□ -0.63
USE1-207ENST00000596136 CCL8P80075 99 aa11.11□□□□□ -0.63
USE1-207ENST00000596136 TEKQ02763 1124 aa11.11□□□□□ -0.63
USE1-207ENST00000596136 PSG7Q13046 419 aa11.11□□□□□ -0.63
USE1-207ENST00000596136 TRIP10Q15642 601 aa11.11□□□□□ -0.63
USE1-207ENST00000596136 MEP1BQ16820 701 aa11.11□□□□□ -0.63
USE1-207ENST00000596136 SLC36A3Q495N2 470 aa11.11□□□□□ -0.63
USE1-207ENST00000596136 CLEC12AQ5QGZ9 265 aa11.11□□□□□ -0.63
USE1-207ENST00000596136 SLC35F1Q5T1Q4 408 aa11.11□□□□□ -0.63
USE1-207ENST00000596136 SLC18B1Q6NT16 456 aa11.11□□□□□ -0.63
USE1-207ENST00000596136 PAPD5Q8NDF8 572 aaKnown RBP11.11□□□□□ -0.63
USE1-207ENST00000596136 SLC7A6Q92536 515 aa11.11□□□□□ -0.63
USE1-207ENST00000596136 GTF3AQ92664 365 aaKnown RBP11.11□□□□□ -0.63
USE1-207ENST00000596136 HAVCR1Q96D42 359 aa11.11□□□□□ -0.63
USE1-207ENST00000596136 SOX7Q9BT81 388 aa11.11□□□□□ -0.63
USE1-207ENST00000596136 RBM4Q9BWF3 364 aaKnown RBP11.11□□□□□ -0.63
USE1-207ENST00000596136 NMNAT2Q9BZQ4 307 aa11.11□□□□□ -0.63
USE1-207ENST00000596136 POFUT1Q9H488 388 aa11.11□□□□□ -0.63
USE1-207ENST00000596136 ZNF275Q9NSD4 429 aaPredicted RBP11.11□□□□□ -0.63
USE1-207ENST00000596136 MRPL22Q9NWU5 206 aaKnown RBP11.11□□□□□ -0.63
USE1-207ENST00000596136 CYB5R1Q9UHQ9 305 aa11.11□□□□□ -0.63
USE1-207ENST00000596136 KCNG2Q9UJ96 466 aa11.11□□□□□ -0.63
USE1-207ENST00000596136 ZDHHC8Q9ULC8 765 aa11.11□□□□□ -0.63
USE1-207ENST00000596136 STARD10Q9Y365 291 aa11.11□□□□□ -0.63
USE1-207ENST00000596136 GRIP1Q9Y3R0 1128 aa11.11□□□□□ -0.63
USE1-207ENST00000596136 U3KQV3 271 aa11.11□□□□□ -0.63
USE1-207ENST00000596136 LOC100289279A0A1B0GTE1 492 aa11.1□□□□□ -0.63
USE1-207ENST00000596136 TCRBV3S1A0A5B6 114 aa11.1□□□□□ -0.63
USE1-207ENST00000596136 PLSCR5A0PG75 271 aa11.1□□□□□ -0.63
USE1-207ENST00000596136 LMX1BO60663 402 aa11.1□□□□□ -0.63
USE1-207ENST00000596136 DNAJC8O75937 253 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms